Protein–RNA interactions for Protein: Q8CCF0

Prpf31, U4/U6 small nuclear ribonucleoprotein Prp31, mousemouse

Known RBP Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf31Q8CCF0 Ppp1r1b-204ENSMUST00000137634 1343 ntTSL 1 (best) BASIC19■□□□□ 0.63
Prpf31Q8CCF0 P2ry2-204ENSMUST00000207916 2372 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Prpf31Q8CCF0 Keap1-206ENSMUST00000216436 2498 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
Prpf31Q8CCF0 Irx5-201ENSMUST00000034184 2450 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Prpf31Q8CCF0 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
Prpf31Q8CCF0 Atp8b2-201ENSMUST00000069805 5559 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
Prpf31Q8CCF0 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC19■□□□□ 0.63
Prpf31Q8CCF0 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Prpf31Q8CCF0 Syt8-202ENSMUST00000105976 1289 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
Prpf31Q8CCF0 Nmnat3-203ENSMUST00000112938 848 ntTSL 1 (best) BASIC19■□□□□ 0.63
Prpf31Q8CCF0 Syt8-205ENSMUST00000122393 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
Prpf31Q8CCF0 Ptf1aos-201ENSMUST00000122978 916 ntTSL 1 (best) BASIC19■□□□□ 0.63
Prpf31Q8CCF0 Tmem80-202ENSMUST00000126510 959 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
Prpf31Q8CCF0 Chmp2a-203ENSMUST00000210587 930 ntAPPRIS P1 TSL 3 BASIC19■□□□□ 0.63
Prpf31Q8CCF0 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC19■□□□□ 0.63
Prpf31Q8CCF0 Gm7791-201ENSMUST00000219066 539 ntBASIC19■□□□□ 0.63
Prpf31Q8CCF0 Fitm1-201ENSMUST00000022826 971 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Prpf31Q8CCF0 Dctn3-201ENSMUST00000030158 973 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Prpf31Q8CCF0 Ripply2-201ENSMUST00000058846 503 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Prpf31Q8CCF0 Snx12-201ENSMUST00000077876 1002 ntTSL 1 (best) BASIC19■□□□□ 0.63
Prpf31Q8CCF0 Man2a1-201ENSMUST00000086723 6991 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Prpf31Q8CCF0 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Prpf31Q8CCF0 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
Prpf31Q8CCF0 Tmem131-208ENSMUST00000194563 6698 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
Prpf31Q8CCF0 Isyna1-201ENSMUST00000019283 1836 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Prpf31Q8CCF0 Gm16897-201ENSMUST00000180780 2492 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Prpf31Q8CCF0 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Prpf31Q8CCF0 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Prpf31Q8CCF0 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Prpf31Q8CCF0 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Prpf31Q8CCF0 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Prpf31Q8CCF0 Gm4217-201ENSMUST00000182243 1002 ntBASIC18.99■□□□□ 0.63
Prpf31Q8CCF0 Gng11-201ENSMUST00000031670 919 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Prpf31Q8CCF0 Prok1-201ENSMUST00000049852 813 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Prpf31Q8CCF0 3110070M22Rik-201ENSMUST00000099148 1123 ntAPPRIS P1 BASIC18.99■□□□□ 0.63
Prpf31Q8CCF0 Ccdc91-201ENSMUST00000032441 2459 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Prpf31Q8CCF0 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Prpf31Q8CCF0 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC18.99■□□□□ 0.63
Prpf31Q8CCF0 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Prpf31Q8CCF0 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Prpf31Q8CCF0 Serinc2-201ENSMUST00000105996 1878 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
Prpf31Q8CCF0 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Prpf31Q8CCF0 Gm43272-201ENSMUST00000200599 1584 ntBASIC18.98■□□□□ 0.63
Prpf31Q8CCF0 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
Prpf31Q8CCF0 Gapdh-202ENSMUST00000117757 1273 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Prpf31Q8CCF0 1810062O18Rik-202ENSMUST00000128848 745 ntTSL 3 BASIC18.98■□□□□ 0.63
Prpf31Q8CCF0 Pthlh-202ENSMUST00000204197 1281 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
Prpf31Q8CCF0 Gm18959-201ENSMUST00000208954 655 ntBASIC18.98■□□□□ 0.63
Prpf31Q8CCF0 Lsm10-201ENSMUST00000055575 943 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Prpf31Q8CCF0 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Prpf31Q8CCF0 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Prpf31Q8CCF0 Mpdu1-201ENSMUST00000018905 1321 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Prpf31Q8CCF0 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Prpf31Q8CCF0 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC18.97■□□□□ 0.63
Prpf31Q8CCF0 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Prpf31Q8CCF0 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Prpf31Q8CCF0 Meox1-201ENSMUST00000057054 2228 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Prpf31Q8CCF0 Thegl-202ENSMUST00000117880 1641 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Prpf31Q8CCF0 Cyb5d2-201ENSMUST00000079681 2393 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Prpf31Q8CCF0 Cutc-202ENSMUST00000112047 1233 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Prpf31Q8CCF0 Gm14114-201ENSMUST00000139345 287 ntTSL 3 BASIC18.97■□□□□ 0.63
Prpf31Q8CCF0 Steap1-201ENSMUST00000015796 1230 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Prpf31Q8CCF0 Spata25-201ENSMUST00000017911 786 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Prpf31Q8CCF0 Gm2274-201ENSMUST00000184539 609 ntBASIC18.97■□□□□ 0.63
Prpf31Q8CCF0 Fgf8-201ENSMUST00000026240 1117 ntAPPRIS P4 TSL 1 (best) BASIC18.97■□□□□ 0.63
Prpf31Q8CCF0 Racgap1-213ENSMUST00000171702 3052 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Prpf31Q8CCF0 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Prpf31Q8CCF0 Ino80e-201ENSMUST00000050833 1944 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Prpf31Q8CCF0 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Prpf31Q8CCF0 Camsap3-212ENSMUST00000208240 2572 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Prpf31Q8CCF0 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Prpf31Q8CCF0 Iqsec2-207ENSMUST00000168786 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Prpf31Q8CCF0 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
Prpf31Q8CCF0 Elac2-203ENSMUST00000108697 2612 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
Prpf31Q8CCF0 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Prpf31Q8CCF0 Tgfb1-201ENSMUST00000002678 2175 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Prpf31Q8CCF0 Ola1-201ENSMUST00000028517 2175 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Prpf31Q8CCF0 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Prpf31Q8CCF0 Il17rb-201ENSMUST00000016110 2061 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Prpf31Q8CCF0 Prpsap1-201ENSMUST00000106391 1841 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Prpf31Q8CCF0 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Prpf31Q8CCF0 Ccnd3-ps-201ENSMUST00000117963 881 ntBASIC18.96■□□□□ 0.63
Prpf31Q8CCF0 Pdcd5-202ENSMUST00000120714 767 ntTSL 3 BASIC18.96■□□□□ 0.63
Prpf31Q8CCF0 Gm37025-201ENSMUST00000195159 829 ntBASIC18.96■□□□□ 0.63
Prpf31Q8CCF0 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Prpf31Q8CCF0 Gm8994-201ENSMUST00000077886 1236 ntAPPRIS P1 BASIC18.96■□□□□ 0.63
Prpf31Q8CCF0 Klhl25-202ENSMUST00000171155 3403 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Prpf31Q8CCF0 Pdlim5-211ENSMUST00000198381 1555 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
Prpf31Q8CCF0 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Prpf31Q8CCF0 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Prpf31Q8CCF0 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Prpf31Q8CCF0 Atp6v1g2-201ENSMUST00000068261 1528 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Prpf31Q8CCF0 Rogdi-207ENSMUST00000202281 1355 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Prpf31Q8CCF0 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC18.95■□□□□ 0.62
Prpf31Q8CCF0 4930540M05Rik-201ENSMUST00000180527 2068 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Prpf31Q8CCF0 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Prpf31Q8CCF0 Man2a2-201ENSMUST00000098346 6554 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Prpf31Q8CCF0 Abhd5-202ENSMUST00000111497 2576 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Prpf31Q8CCF0 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC18.95■□□□□ 0.62
Prpf31Q8CCF0 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Retrieved 100 of 76,532 protein–RNA pairs in 19.6 ms