Protein–RNA interactions for Protein: Q8C8B0

Alx1, ALX homeobox protein 1, mousemouse

Predictions only

Length 326 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Alx1Q8C8B0 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Alx1Q8C8B0 Arhgef25-212ENSMUST00000222006 1896 ntTSL 5 BASIC20.3■□□□□ 0.84
Alx1Q8C8B0 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC20.3■□□□□ 0.84
Alx1Q8C8B0 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Alx1Q8C8B0 Gm45606-201ENSMUST00000209836 2795 ntBASIC20.3■□□□□ 0.84
Alx1Q8C8B0 Donson-201ENSMUST00000023682 2360 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Alx1Q8C8B0 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Alx1Q8C8B0 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC20.3■□□□□ 0.84
Alx1Q8C8B0 Tm4sf19-201ENSMUST00000115149 1257 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Alx1Q8C8B0 H2afz-201ENSMUST00000041045 1069 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Alx1Q8C8B0 Hsf5-201ENSMUST00000093956 4158 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
Alx1Q8C8B0 Amigo2-201ENSMUST00000053106 2871 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Alx1Q8C8B0 Vrk2-201ENSMUST00000078362 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Alx1Q8C8B0 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
Alx1Q8C8B0 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Alx1Q8C8B0 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Alx1Q8C8B0 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC20.29■□□□□ 0.84
Alx1Q8C8B0 Cdk10-201ENSMUST00000036880 1642 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Alx1Q8C8B0 Ablim1-204ENSMUST00000111524 1251 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Alx1Q8C8B0 Gm7889-201ENSMUST00000185591 958 ntBASIC20.29■□□□□ 0.84
Alx1Q8C8B0 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
Alx1Q8C8B0 Ptges3l-202ENSMUST00000103102 1463 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Alx1Q8C8B0 Fam57b-201ENSMUST00000079423 2328 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Alx1Q8C8B0 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC20.28■□□□□ 0.84
Alx1Q8C8B0 Ffar3-201ENSMUST00000094583 1625 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Alx1Q8C8B0 Stambpl1-201ENSMUST00000054956 2024 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Alx1Q8C8B0 Izumo1r-204ENSMUST00000121116 726 ntTSL 2 BASIC20.28■□□□□ 0.84
Alx1Q8C8B0 Comtd1-204ENSMUST00000177527 714 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
Alx1Q8C8B0 Gm3764-209ENSMUST00000181550 1093 ntTSL 3 BASIC20.28■□□□□ 0.84
Alx1Q8C8B0 Gm17949-201ENSMUST00000210548 1179 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
Alx1Q8C8B0 Pigf-201ENSMUST00000024957 988 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Alx1Q8C8B0 Mrpl21-202ENSMUST00000025745 1138 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
Alx1Q8C8B0 BC048679-201ENSMUST00000073406 522 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
Alx1Q8C8B0 St3gal3-203ENSMUST00000106410 2225 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Alx1Q8C8B0 P2ry1-203ENSMUST00000193943 2203 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
Alx1Q8C8B0 Mycn-202ENSMUST00000130990 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Alx1Q8C8B0 Gm43702-201ENSMUST00000198772 2546 ntBASIC20.28■□□□□ 0.84
Alx1Q8C8B0 Sars2-201ENSMUST00000094632 1868 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Alx1Q8C8B0 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
Alx1Q8C8B0 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Alx1Q8C8B0 Ccdc149-201ENSMUST00000059428 3295 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
Alx1Q8C8B0 Skap1-203ENSMUST00000100521 1539 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Alx1Q8C8B0 Skap1-204ENSMUST00000103154 1507 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
Alx1Q8C8B0 Tfap2a-209ENSMUST00000225180 1828 ntBASIC20.27■□□□□ 0.84
Alx1Q8C8B0 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Alx1Q8C8B0 Prmt2-202ENSMUST00000099571 2052 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
Alx1Q8C8B0 Pdxk-ps-203ENSMUST00000183934 680 ntTSL 3 BASIC20.27■□□□□ 0.84
Alx1Q8C8B0 Gm2274-201ENSMUST00000184539 609 ntBASIC20.27■□□□□ 0.84
Alx1Q8C8B0 Gm32151-201ENSMUST00000223521 915 ntTSL 5 BASIC20.27■□□□□ 0.84
Alx1Q8C8B0 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC20.27■□□□□ 0.84
Alx1Q8C8B0 Gm16863-201ENSMUST00000181476 2431 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Alx1Q8C8B0 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Alx1Q8C8B0 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Alx1Q8C8B0 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Alx1Q8C8B0 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Alx1Q8C8B0 4930519A11Rik-201ENSMUST00000181381 1523 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
Alx1Q8C8B0 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Alx1Q8C8B0 Praf2-201ENSMUST00000033489 1339 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Alx1Q8C8B0 5031425F14Rik-201ENSMUST00000127920 2098 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Alx1Q8C8B0 Panx2-203ENSMUST00000162424 3391 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Alx1Q8C8B0 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Alx1Q8C8B0 Gm5414-201ENSMUST00000062879 1659 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
Alx1Q8C8B0 8030462N17Rik-201ENSMUST00000074653 3418 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Alx1Q8C8B0 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Alx1Q8C8B0 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Alx1Q8C8B0 Slc2a8-204ENSMUST00000153484 1168 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Alx1Q8C8B0 AC122465.1-201ENSMUST00000220813 1209 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Alx1Q8C8B0 AC159205.6-201ENSMUST00000224935 887 ntBASIC20.26■□□□□ 0.83
Alx1Q8C8B0 Nudt8-202ENSMUST00000025802 787 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Alx1Q8C8B0 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
Alx1Q8C8B0 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Alx1Q8C8B0 Trim25-202ENSMUST00000100627 1433 ntTSL 5 BASIC20.26■□□□□ 0.83
Alx1Q8C8B0 Aifm1-201ENSMUST00000037349 2237 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
Alx1Q8C8B0 Tnfrsf25-201ENSMUST00000025706 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Alx1Q8C8B0 Dbn1-202ENSMUST00000109921 2378 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Alx1Q8C8B0 Slc5a10-201ENSMUST00000051552 2261 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Alx1Q8C8B0 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
Alx1Q8C8B0 B3gnt9-202ENSMUST00000136822 2516 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
Alx1Q8C8B0 Gne-202ENSMUST00000102936 2920 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Alx1Q8C8B0 Nptn-212ENSMUST00000177292 1390 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
Alx1Q8C8B0 Pdxdc1-203ENSMUST00000115803 1268 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
Alx1Q8C8B0 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Alx1Q8C8B0 1810062O18Rik-202ENSMUST00000128848 745 ntTSL 3 BASIC20.25■□□□□ 0.83
Alx1Q8C8B0 Mir9-3hg-206ENSMUST00000182937 636 ntTSL 3 BASIC20.25■□□□□ 0.83
Alx1Q8C8B0 Mrpl21-201ENSMUST00000025743 802 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Alx1Q8C8B0 Coa6-201ENSMUST00000059093 747 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Alx1Q8C8B0 Gm9987-201ENSMUST00000069768 567 ntBASIC20.25■□□□□ 0.83
Alx1Q8C8B0 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Alx1Q8C8B0 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC20.25■□□□□ 0.83
Alx1Q8C8B0 Kcnab3-201ENSMUST00000018614 2538 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Alx1Q8C8B0 1600012H06Rik-201ENSMUST00000052691 2506 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Alx1Q8C8B0 Med18-201ENSMUST00000102567 1675 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Alx1Q8C8B0 Map3k7cl-201ENSMUST00000026700 1652 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Alx1Q8C8B0 Ache-201ENSMUST00000024099 2186 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Alx1Q8C8B0 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Alx1Q8C8B0 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Alx1Q8C8B0 Bdkrb1-202ENSMUST00000182899 1313 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
Alx1Q8C8B0 Bdkrb1-201ENSMUST00000041229 1338 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
Alx1Q8C8B0 Tm9sf2-203ENSMUST00000171318 1494 ntTSL 5 BASIC20.24■□□□□ 0.83
Alx1Q8C8B0 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Retrieved 100 of 76,532 protein–RNA pairs in 28.6 ms