Protein–RNA interactions for Protein: Q8C878

Uba3, NEDD8-activating enzyme E1 catalytic subunit, mousemouse

Predictions only

Length 462 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Uba3Q8C878 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC18.31■□□□□ 0.52
Uba3Q8C878 Dhx36-201ENSMUST00000029336 5620 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Uba3Q8C878 Pi4k2b-201ENSMUST00000031081 3139 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
Uba3Q8C878 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Uba3Q8C878 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Uba3Q8C878 Kmt5c-201ENSMUST00000098853 2189 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Uba3Q8C878 Mtrf1l-201ENSMUST00000019908 2588 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Uba3Q8C878 Mthfsl-201ENSMUST00000113110 801 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Uba3Q8C878 Mthfs-203ENSMUST00000118870 705 ntTSL 3 BASIC18.3■□□□□ 0.52
Uba3Q8C878 Mir5122-201ENSMUST00000175004 89 ntBASIC18.3■□□□□ 0.52
Uba3Q8C878 Pomc-204ENSMUST00000219543 1043 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Uba3Q8C878 AC156016.1-201ENSMUST00000227190 1035 ntBASIC18.3■□□□□ 0.52
Uba3Q8C878 Otx2os1-204ENSMUST00000227221 751 ntBASIC18.3■□□□□ 0.52
Uba3Q8C878 Mthfs-201ENSMUST00000085256 816 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Uba3Q8C878 Tgds-201ENSMUST00000022727 1682 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Uba3Q8C878 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Uba3Q8C878 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC18.3■□□□□ 0.52
Uba3Q8C878 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Uba3Q8C878 Agpat3-202ENSMUST00000105387 1316 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Uba3Q8C878 Echdc2-204ENSMUST00000116309 1238 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Uba3Q8C878 B430219N15Rik-201ENSMUST00000147230 835 ntTSL 2 BASIC18.29■□□□□ 0.52
Uba3Q8C878 Gm24841-201ENSMUST00000158676 357 ntBASIC18.29■□□□□ 0.52
Uba3Q8C878 2310033P09Rik-201ENSMUST00000020719 1285 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Uba3Q8C878 Tomm20-202ENSMUST00000212771 458 ntTSL 2 BASIC18.29■□□□□ 0.52
Uba3Q8C878 Mvb12a-201ENSMUST00000034272 1062 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Uba3Q8C878 Espn-202ENSMUST00000049305 1142 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Uba3Q8C878 Nme2-202ENSMUST00000072566 734 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Uba3Q8C878 Rex1bd-201ENSMUST00000075175 671 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Uba3Q8C878 Coro7-202ENSMUST00000090480 1147 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Uba3Q8C878 Aurkb-201ENSMUST00000021277 1950 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Uba3Q8C878 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Uba3Q8C878 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC18.29■□□□□ 0.52
Uba3Q8C878 Acbd4-201ENSMUST00000024492 2075 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
Uba3Q8C878 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Uba3Q8C878 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC18.28■□□□□ 0.52
Uba3Q8C878 Pitpnm2-210ENSMUST00000162812 6952 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
Uba3Q8C878 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Uba3Q8C878 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Uba3Q8C878 Eif4enif1-203ENSMUST00000110049 3614 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Uba3Q8C878 5430402O13Rik-201ENSMUST00000126537 869 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Uba3Q8C878 2310001K24Rik-202ENSMUST00000186760 740 ntTSL 2 BASIC18.28■□□□□ 0.52
Uba3Q8C878 6530437J22Rik-201ENSMUST00000207515 773 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Uba3Q8C878 Ppic-201ENSMUST00000025419 1286 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Uba3Q8C878 Fgfr1op2-202ENSMUST00000058245 918 ntTSL 2 BASIC18.28■□□□□ 0.52
Uba3Q8C878 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
Uba3Q8C878 Apba3-201ENSMUST00000057798 2106 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Uba3Q8C878 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
Uba3Q8C878 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Uba3Q8C878 Garem1-201ENSMUST00000049260 4923 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Uba3Q8C878 Zxdc-203ENSMUST00000113539 4864 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Uba3Q8C878 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC18.27■□□□□ 0.52
Uba3Q8C878 Insig2-203ENSMUST00000159085 1252 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Uba3Q8C878 Impa1-204ENSMUST00000191670 1100 ntTSL 2 BASIC18.27■□□□□ 0.52
Uba3Q8C878 Arhgef4-208ENSMUST00000211073 171 ntBASIC18.27■□□□□ 0.52
Uba3Q8C878 Tpsg1-201ENSMUST00000024999 1186 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Uba3Q8C878 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC18.27■□□□□ 0.52
Uba3Q8C878 Guca1a-201ENSMUST00000059348 871 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Uba3Q8C878 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.52
Uba3Q8C878 Pea15a-201ENSMUST00000013842 2501 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Uba3Q8C878 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Uba3Q8C878 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC18.27■□□□□ 0.51
Uba3Q8C878 Ostm1-201ENSMUST00000040718 3006 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Uba3Q8C878 Klhdc8a-201ENSMUST00000046071 4269 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Uba3Q8C878 Nfib-206ENSMUST00000107248 3294 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Uba3Q8C878 Lrrc14-204ENSMUST00000137649 2832 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Uba3Q8C878 Bmi1-201ENSMUST00000028071 3594 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Uba3Q8C878 Zpbp2-205ENSMUST00000107513 1240 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
Uba3Q8C878 Phgr1-202ENSMUST00000130293 542 ntAPPRIS P2 TSL 5 BASIC18.26■□□□□ 0.51
Uba3Q8C878 D330020A13Rik-201ENSMUST00000181956 1069 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
Uba3Q8C878 Gm9484-201ENSMUST00000195892 1159 ntBASIC18.26■□□□□ 0.51
Uba3Q8C878 Timm23-208ENSMUST00000226683 750 ntBASIC18.26■□□□□ 0.51
Uba3Q8C878 4930412O13Rik-201ENSMUST00000026889 1187 ntAPPRIS P5 TSL 1 (best) BASIC18.26■□□□□ 0.51
Uba3Q8C878 Lat-201ENSMUST00000032997 1235 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Uba3Q8C878 Fam167b-201ENSMUST00000052835 913 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Uba3Q8C878 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
Uba3Q8C878 Gm43702-201ENSMUST00000198772 2546 ntBASIC18.26■□□□□ 0.51
Uba3Q8C878 Ift74-201ENSMUST00000030311 2139 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
Uba3Q8C878 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Uba3Q8C878 Lancl2-202ENSMUST00000072954 2245 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Uba3Q8C878 Gpat3-203ENSMUST00000112887 3059 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Uba3Q8C878 Pkp4-202ENSMUST00000102754 4614 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
Uba3Q8C878 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC18.25■□□□□ 0.51
Uba3Q8C878 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Uba3Q8C878 Taf6l-211ENSMUST00000177056 2006 ntTSL 5 BASIC18.25■□□□□ 0.51
Uba3Q8C878 Ust-201ENSMUST00000061601 4228 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Uba3Q8C878 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Uba3Q8C878 Rcbtb2-217ENSMUST00000167401 868 ntTSL 5 BASIC18.25■□□□□ 0.51
Uba3Q8C878 Gm16998-201ENSMUST00000181899 1230 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Uba3Q8C878 Gm8969-201ENSMUST00000199694 526 ntBASIC18.25■□□□□ 0.51
Uba3Q8C878 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
Uba3Q8C878 Casp9-201ENSMUST00000030747 3897 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Uba3Q8C878 Arpc4-201ENSMUST00000156898 2270 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Uba3Q8C878 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
Uba3Q8C878 Csnk2a2-203ENSMUST00000212214 6779 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Uba3Q8C878 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC18.24■□□□□ 0.51
Uba3Q8C878 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Uba3Q8C878 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Uba3Q8C878 Prps1l3-201ENSMUST00000139049 1720 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Uba3Q8C878 C1qtnf5-202ENSMUST00000114816 1259 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Uba3Q8C878 Rsu1-209ENSMUST00000191959 720 ntTSL 3 BASIC18.24■□□□□ 0.51
Retrieved 100 of 76,532 protein–RNA pairs in 91.8 ms