Protein–RNA interactions for Protein: Q8C4J0

Ccdc60, Coiled-coil domain-containing protein 60, mousemouse

Predictions only

Length 545 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc60Q8C4J0 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC22.16■■□□□ 1.14
Ccdc60Q8C4J0 Nfib-206ENSMUST00000107248 3294 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
Ccdc60Q8C4J0 Tm7sf2-201ENSMUST00000025713 1471 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Ccdc60Q8C4J0 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC22.15■■□□□ 1.14
Ccdc60Q8C4J0 Zpbp2-205ENSMUST00000107513 1240 ntAPPRIS ALT2 TSL 5 BASIC22.15■■□□□ 1.14
Ccdc60Q8C4J0 Gm16998-201ENSMUST00000181899 1230 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
Ccdc60Q8C4J0 Gm21814-202ENSMUST00000203277 873 ntBASIC22.15■■□□□ 1.14
Ccdc60Q8C4J0 Trap1-201ENSMUST00000006137 2320 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Ccdc60Q8C4J0 Dhx32-203ENSMUST00000106139 2233 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
Ccdc60Q8C4J0 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC22.15■■□□□ 1.14
Ccdc60Q8C4J0 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC22.14■■□□□ 1.14
Ccdc60Q8C4J0 Rbpms-213ENSMUST00000191473 2547 ntTSL 1 (best) BASIC22.14■■□□□ 1.14
Ccdc60Q8C4J0 Bub3-201ENSMUST00000084502 2218 ntAPPRIS P2 TSL 1 (best) BASIC22.14■■□□□ 1.14
Ccdc60Q8C4J0 Med9-201ENSMUST00000081980 1920 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.14
Ccdc60Q8C4J0 Ctsh-201ENSMUST00000034915 1617 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.14
Ccdc60Q8C4J0 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
Ccdc60Q8C4J0 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC22.14■■□□□ 1.13
Ccdc60Q8C4J0 Gm38027-201ENSMUST00000192315 235 ntBASIC22.14■■□□□ 1.13
Ccdc60Q8C4J0 Gm3375-201ENSMUST00000203929 796 ntBASIC22.14■■□□□ 1.13
Ccdc60Q8C4J0 Odf3b-204ENSMUST00000227834 930 ntBASIC22.14■■□□□ 1.13
Ccdc60Q8C4J0 Lysmd2-201ENSMUST00000034702 1189 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
Ccdc60Q8C4J0 Cacul1-201ENSMUST00000081790 5790 ntAPPRIS P3 TSL 1 (best) BASIC22.14■■□□□ 1.13
Ccdc60Q8C4J0 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC22.14■■□□□ 1.13
Ccdc60Q8C4J0 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
Ccdc60Q8C4J0 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC22.14■■□□□ 1.13
Ccdc60Q8C4J0 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
Ccdc60Q8C4J0 Gprc5c-203ENSMUST00000122967 1709 ntTSL 5 BASIC22.14■■□□□ 1.13
Ccdc60Q8C4J0 Gm37519-201ENSMUST00000191687 2210 ntBASIC22.14■■□□□ 1.13
Ccdc60Q8C4J0 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
Ccdc60Q8C4J0 Sfrp2-201ENSMUST00000029625 2003 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
Ccdc60Q8C4J0 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
Ccdc60Q8C4J0 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
Ccdc60Q8C4J0 Atf7ip2-204ENSMUST00000119023 1048 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
Ccdc60Q8C4J0 Rcbtb2-217ENSMUST00000167401 868 ntTSL 5 BASIC22.13■■□□□ 1.13
Ccdc60Q8C4J0 Gm37055-201ENSMUST00000191866 133 ntBASIC22.13■■□□□ 1.13
Ccdc60Q8C4J0 Rsu1-209ENSMUST00000191959 720 ntTSL 3 BASIC22.13■■□□□ 1.13
Ccdc60Q8C4J0 Casp3-203ENSMUST00000210534 583 ntTSL 5 BASIC22.13■■□□□ 1.13
Ccdc60Q8C4J0 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
Ccdc60Q8C4J0 Gm16863-201ENSMUST00000181476 2431 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
Ccdc60Q8C4J0 Prdm6-201ENSMUST00000091900 2601 ntAPPRIS P2 TSL 1 (best) BASIC22.13■■□□□ 1.13
Ccdc60Q8C4J0 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
Ccdc60Q8C4J0 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC22.13■■□□□ 1.13
Ccdc60Q8C4J0 Slc5a10-201ENSMUST00000051552 2261 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
Ccdc60Q8C4J0 Adsl-204ENSMUST00000164806 1595 ntTSL 5 BASIC22.12■■□□□ 1.13
Ccdc60Q8C4J0 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
Ccdc60Q8C4J0 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
Ccdc60Q8C4J0 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
Ccdc60Q8C4J0 Gm3264-202ENSMUST00000166776 882 ntAPPRIS ALT2 TSL 5 BASIC22.12■■□□□ 1.13
Ccdc60Q8C4J0 Rps2-ps2-201ENSMUST00000194305 881 ntBASIC22.12■■□□□ 1.13
Ccdc60Q8C4J0 Ccnd2-204ENSMUST00000201637 1006 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
Ccdc60Q8C4J0 Scamp4-201ENSMUST00000079883 1804 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
Ccdc60Q8C4J0 Snrnp48-201ENSMUST00000091641 1785 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
Ccdc60Q8C4J0 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC22.12■■□□□ 1.13
Ccdc60Q8C4J0 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
Ccdc60Q8C4J0 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
Ccdc60Q8C4J0 A930001A20Rik-201ENSMUST00000182586 1366 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
Ccdc60Q8C4J0 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
Ccdc60Q8C4J0 Abhd13-201ENSMUST00000048216 5074 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
Ccdc60Q8C4J0 Rrp15-201ENSMUST00000001339 1321 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
Ccdc60Q8C4J0 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
Ccdc60Q8C4J0 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC22.11■■□□□ 1.13
Ccdc60Q8C4J0 Edn2-201ENSMUST00000030384 1462 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
Ccdc60Q8C4J0 Utf1-201ENSMUST00000168457 1227 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
Ccdc60Q8C4J0 Adra2a-201ENSMUST00000036700 3801 ntAPPRIS P1 BASIC22.11■■□□□ 1.13
Ccdc60Q8C4J0 Tollip-202ENSMUST00000055819 1100 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
Ccdc60Q8C4J0 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC22.11■■□□□ 1.13
Ccdc60Q8C4J0 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC22.11■■□□□ 1.13
Ccdc60Q8C4J0 Glmn-201ENSMUST00000078021 2015 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
Ccdc60Q8C4J0 Gm42417-201ENSMUST00000191849 2256 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
Ccdc60Q8C4J0 Gm6093-201ENSMUST00000221792 1623 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
Ccdc60Q8C4J0 Lrriq4-203ENSMUST00000172350 1797 ntAPPRIS P3 TSL 5 BASIC22.1■■□□□ 1.13
Ccdc60Q8C4J0 Mfsd10-202ENSMUST00000114329 1906 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
Ccdc60Q8C4J0 Gm43808-201ENSMUST00000202534 2065 ntBASIC22.1■■□□□ 1.13
Ccdc60Q8C4J0 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC22.1■■□□□ 1.13
Ccdc60Q8C4J0 Gm16105-201ENSMUST00000156926 697 ntTSL 3 BASIC22.1■■□□□ 1.13
Ccdc60Q8C4J0 2810425M01Rik-201ENSMUST00000180790 1850 ntTSL 5 BASIC22.1■■□□□ 1.13
Ccdc60Q8C4J0 Cpne1-217ENSMUST00000184265 871 ntTSL 5 BASIC22.1■■□□□ 1.13
Ccdc60Q8C4J0 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
Ccdc60Q8C4J0 Rps12-206ENSMUST00000218221 460 ntTSL 5 BASIC22.1■■□□□ 1.13
Ccdc60Q8C4J0 Ache-201ENSMUST00000024099 2186 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
Ccdc60Q8C4J0 Gm5417-201ENSMUST00000079706 384 ntBASIC22.1■■□□□ 1.13
Ccdc60Q8C4J0 Cxcl14-201ENSMUST00000021970 1827 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
Ccdc60Q8C4J0 Abhd10-201ENSMUST00000066983 2848 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
Ccdc60Q8C4J0 Hsf5-201ENSMUST00000093956 4158 ntAPPRIS P1 TSL 5 BASIC22.09■■□□□ 1.13
Ccdc60Q8C4J0 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC22.09■■□□□ 1.13
Ccdc60Q8C4J0 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
Ccdc60Q8C4J0 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
Ccdc60Q8C4J0 Bmi1-201ENSMUST00000028071 3594 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
Ccdc60Q8C4J0 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
Ccdc60Q8C4J0 Ppm1b-202ENSMUST00000112304 3262 ntAPPRIS P3 TSL 1 (best) BASIC22.09■■□□□ 1.13
Ccdc60Q8C4J0 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC22.09■■□□□ 1.13
Ccdc60Q8C4J0 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
Ccdc60Q8C4J0 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
Ccdc60Q8C4J0 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
Ccdc60Q8C4J0 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC22.09■■□□□ 1.13
Ccdc60Q8C4J0 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC22.09■■□□□ 1.13
Ccdc60Q8C4J0 Trp73-203ENSMUST00000105643 1916 ntAPPRIS ALT2 TSL 5 BASIC22.09■■□□□ 1.13
Ccdc60Q8C4J0 Scrn2-201ENSMUST00000021249 1530 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
Ccdc60Q8C4J0 Zdhhc6-207ENSMUST00000224897 2168 ntAPPRIS P1 BASIC22.09■■□□□ 1.13
Ccdc60Q8C4J0 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC22.09■■□□□ 1.13
Retrieved 100 of 76,532 protein–RNA pairs in 24.5 ms