Protein–RNA interactions for Protein: Q8C120

Sh3rf3, SH3 domain-containing RING finger protein 3, mousemouse

Predictions only

Length 878 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf3Q8C120 Stk32c-202ENSMUST00000165870 1883 ntTSL 5 BASIC18.09■□□□□ 0.49
Sh3rf3Q8C120 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Sh3rf3Q8C120 Zfp764-201ENSMUST00000059199 2508 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Sh3rf3Q8C120 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Sh3rf3Q8C120 Mag-201ENSMUST00000040548 2419 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Sh3rf3Q8C120 Pdap1-201ENSMUST00000031627 2353 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Sh3rf3Q8C120 Acbd3-201ENSMUST00000027780 3471 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Sh3rf3Q8C120 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.49
Sh3rf3Q8C120 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
Sh3rf3Q8C120 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC18.08■□□□□ 0.48
Sh3rf3Q8C120 Naa10-205ENSMUST00000114390 797 ntTSL 5 BASIC18.08■□□□□ 0.48
Sh3rf3Q8C120 Serf1-204ENSMUST00000151821 570 ntTSL 2 BASIC18.08■□□□□ 0.48
Sh3rf3Q8C120 Atp23-202ENSMUST00000168520 1043 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Sh3rf3Q8C120 Nudt22-203ENSMUST00000180765 1073 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.48
Sh3rf3Q8C120 Gm8969-201ENSMUST00000199694 526 ntBASIC18.08■□□□□ 0.48
Sh3rf3Q8C120 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.48
Sh3rf3Q8C120 Ppm1j-201ENSMUST00000002298 1721 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Sh3rf3Q8C120 Bean1-201ENSMUST00000093245 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
Sh3rf3Q8C120 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Sh3rf3Q8C120 Grina-201ENSMUST00000023225 1693 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Sh3rf3Q8C120 Haus8-201ENSMUST00000035960 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
Sh3rf3Q8C120 Aurkb-201ENSMUST00000021277 1950 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Sh3rf3Q8C120 Med9-201ENSMUST00000081980 1920 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Sh3rf3Q8C120 Tmem125-201ENSMUST00000060214 1864 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
Sh3rf3Q8C120 Znrf1-201ENSMUST00000095176 3108 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Sh3rf3Q8C120 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
Sh3rf3Q8C120 C030014I23Rik-201ENSMUST00000080911 1810 ntBASIC18.07■□□□□ 0.48
Sh3rf3Q8C120 Gm43338-201ENSMUST00000198617 2223 ntBASIC18.07■□□□□ 0.48
Sh3rf3Q8C120 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
Sh3rf3Q8C120 Gm43808-201ENSMUST00000202534 2065 ntBASIC18.07■□□□□ 0.48
Sh3rf3Q8C120 Tgds-201ENSMUST00000022727 1682 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Sh3rf3Q8C120 Spcs1-201ENSMUST00000186131 1005 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Sh3rf3Q8C120 Anapc13-204ENSMUST00000190279 589 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Sh3rf3Q8C120 Il1rn-201ENSMUST00000114482 1986 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Sh3rf3Q8C120 St7l-202ENSMUST00000106769 2428 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Sh3rf3Q8C120 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Sh3rf3Q8C120 Zbtb32-202ENSMUST00000108151 1775 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
Sh3rf3Q8C120 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC18.06■□□□□ 0.48
Sh3rf3Q8C120 Mettl4-ps1-202ENSMUST00000130218 1323 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Sh3rf3Q8C120 Gm43272-201ENSMUST00000200599 1584 ntBASIC18.06■□□□□ 0.48
Sh3rf3Q8C120 Zfp467-209ENSMUST00000114566 543 ntTSL 3 BASIC18.06■□□□□ 0.48
Sh3rf3Q8C120 Gm12382-201ENSMUST00000122005 922 ntBASIC18.06■□□□□ 0.48
Sh3rf3Q8C120 2900072N19Rik-201ENSMUST00000123840 806 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Sh3rf3Q8C120 Slc2a8-201ENSMUST00000028129 2108 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Sh3rf3Q8C120 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Sh3rf3Q8C120 Zfp92-202ENSMUST00000086470 2050 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Sh3rf3Q8C120 Fiz1-208ENSMUST00000208944 2306 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Sh3rf3Q8C120 Gtpbp3-208ENSMUST00000168847 2803 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
Sh3rf3Q8C120 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Sh3rf3Q8C120 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
Sh3rf3Q8C120 Ints8-201ENSMUST00000044616 3433 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Sh3rf3Q8C120 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Sh3rf3Q8C120 Bcar1-201ENSMUST00000166232 3142 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
Sh3rf3Q8C120 Prkra-201ENSMUST00000002808 1614 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Sh3rf3Q8C120 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Sh3rf3Q8C120 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Sh3rf3Q8C120 Proser2-201ENSMUST00000054254 2061 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Sh3rf3Q8C120 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Sh3rf3Q8C120 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Sh3rf3Q8C120 Ube2d3-202ENSMUST00000166033 2504 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Sh3rf3Q8C120 Prrt4-201ENSMUST00000159200 3411 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Sh3rf3Q8C120 Icam2-201ENSMUST00000001055 1282 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Sh3rf3Q8C120 Bex3-202ENSMUST00000113112 826 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Sh3rf3Q8C120 Smim1-212ENSMUST00000146543 839 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Sh3rf3Q8C120 Ccdc58-202ENSMUST00000163352 970 ntTSL 3 BASIC18.05■□□□□ 0.48
Sh3rf3Q8C120 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Sh3rf3Q8C120 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC18.05■□□□□ 0.48
Sh3rf3Q8C120 Ly6g6d-201ENSMUST00000007259 546 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Sh3rf3Q8C120 Irak1-201ENSMUST00000033769 2890 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Sh3rf3Q8C120 Tm7sf2-201ENSMUST00000025713 1471 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Sh3rf3Q8C120 Prodh-201ENSMUST00000003620 2385 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Sh3rf3Q8C120 Cadm3-201ENSMUST00000005470 2518 ntTSL 5 BASIC18.05■□□□□ 0.48
Sh3rf3Q8C120 Capg-202ENSMUST00000114071 1400 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Sh3rf3Q8C120 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Sh3rf3Q8C120 Parg-208ENSMUST00000170840 2894 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
Sh3rf3Q8C120 St3gal3-203ENSMUST00000106410 2225 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Sh3rf3Q8C120 Lrrc73-201ENSMUST00000095262 1384 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Sh3rf3Q8C120 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC18.04■□□□□ 0.48
Sh3rf3Q8C120 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Sh3rf3Q8C120 Il6st-208ENSMUST00000184311 2985 ntAPPRIS P2 TSL 5 BASIC18.04■□□□□ 0.48
Sh3rf3Q8C120 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Sh3rf3Q8C120 Arhgef16-201ENSMUST00000030898 2860 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Sh3rf3Q8C120 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Sh3rf3Q8C120 Tm7sf2-202ENSMUST00000113543 1498 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Sh3rf3Q8C120 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Sh3rf3Q8C120 Unc50-203ENSMUST00000118059 1179 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
Sh3rf3Q8C120 4933406B15Rik-201ENSMUST00000220065 1182 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Sh3rf3Q8C120 Cdk2ap2-201ENSMUST00000025779 1080 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Sh3rf3Q8C120 Plppr2-201ENSMUST00000046371 2626 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Sh3rf3Q8C120 B4galnt4-201ENSMUST00000048002 3556 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Sh3rf3Q8C120 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Sh3rf3Q8C120 Ntrk1-201ENSMUST00000029712 2588 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Sh3rf3Q8C120 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Sh3rf3Q8C120 Dhx32-203ENSMUST00000106139 2233 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Sh3rf3Q8C120 Ptgfrn-201ENSMUST00000102694 5902 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Sh3rf3Q8C120 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
Sh3rf3Q8C120 Gm15378-201ENSMUST00000121894 207 ntBASIC18.03■□□□□ 0.48
Sh3rf3Q8C120 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Sh3rf3Q8C120 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC18.03■□□□□ 0.48
Sh3rf3Q8C120 Syngr1-202ENSMUST00000009728 819 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Retrieved 100 of 76,532 protein–RNA pairs in 18.7 ms