Protein–RNA interactions for Protein: Q8C0D0

Trub1, Probable tRNA pseudouridine synthase 1, mousemouse

Known RBP Predictions only

Length 338 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trub1Q8C0D0 Camsap3-206ENSMUST00000207533 2584 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Trub1Q8C0D0 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Trub1Q8C0D0 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Trub1Q8C0D0 Fkrp-201ENSMUST00000061390 2827 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Trub1Q8C0D0 AC122335.2-201ENSMUST00000213901 6181 ntBASIC17.93■□□□□ 0.46
Trub1Q8C0D0 Nrxn1-217ENSMUST00000174337 3021 ntTSL 5 BASIC17.93■□□□□ 0.46
Trub1Q8C0D0 AC124581.1-201ENSMUST00000225416 1399 ntBASIC17.92■□□□□ 0.46
Trub1Q8C0D0 Fam181a-201ENSMUST00000179363 1406 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
Trub1Q8C0D0 AC121598.2-201ENSMUST00000228376 2325 ntBASIC17.92■□□□□ 0.46
Trub1Q8C0D0 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Trub1Q8C0D0 CT010444.2-201ENSMUST00000217877 1629 ntBASIC17.92■□□□□ 0.46
Trub1Q8C0D0 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
Trub1Q8C0D0 Atp5g1-203ENSMUST00000107686 691 ntAPPRIS P1 TSL 3 BASIC17.92■□□□□ 0.46
Trub1Q8C0D0 Gm13168-201ENSMUST00000121771 632 ntBASIC17.92■□□□□ 0.46
Trub1Q8C0D0 Atp23-202ENSMUST00000168520 1043 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Trub1Q8C0D0 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
Trub1Q8C0D0 Tm7sf2-202ENSMUST00000113543 1498 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Trub1Q8C0D0 2810425M01Rik-201ENSMUST00000180790 1850 ntTSL 5 BASIC17.92■□□□□ 0.46
Trub1Q8C0D0 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Trub1Q8C0D0 Glmn-201ENSMUST00000078021 2015 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Trub1Q8C0D0 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
Trub1Q8C0D0 Tmco4-202ENSMUST00000050949 3318 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Trub1Q8C0D0 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Trub1Q8C0D0 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC17.91■□□□□ 0.46
Trub1Q8C0D0 Icam2-201ENSMUST00000001055 1282 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Trub1Q8C0D0 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC17.91■□□□□ 0.46
Trub1Q8C0D0 Zfp467-209ENSMUST00000114566 543 ntTSL 3 BASIC17.91■□□□□ 0.46
Trub1Q8C0D0 Smim1-212ENSMUST00000146543 839 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Trub1Q8C0D0 Prss16-204ENSMUST00000150547 1159 ntTSL 3 BASIC17.91■□□□□ 0.46
Trub1Q8C0D0 E030044B06Rik-201ENSMUST00000181195 1266 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Trub1Q8C0D0 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Trub1Q8C0D0 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Trub1Q8C0D0 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Trub1Q8C0D0 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
Trub1Q8C0D0 March8-202ENSMUST00000101032 4611 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Trub1Q8C0D0 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Trub1Q8C0D0 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Trub1Q8C0D0 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Trub1Q8C0D0 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
Trub1Q8C0D0 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Trub1Q8C0D0 Cxcl14-201ENSMUST00000021970 1827 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Trub1Q8C0D0 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC17.9■□□□□ 0.46
Trub1Q8C0D0 Ntng1-204ENSMUST00000106571 1446 ntTSL 5 BASIC17.9■□□□□ 0.46
Trub1Q8C0D0 Ntng1-210ENSMUST00000138953 1443 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Trub1Q8C0D0 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Trub1Q8C0D0 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Trub1Q8C0D0 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Trub1Q8C0D0 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC17.9■□□□□ 0.46
Trub1Q8C0D0 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
Trub1Q8C0D0 Vsig10l-204ENSMUST00000203769 2473 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Trub1Q8C0D0 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
Trub1Q8C0D0 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC17.9■□□□□ 0.46
Trub1Q8C0D0 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC17.9■□□□□ 0.46
Trub1Q8C0D0 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Trub1Q8C0D0 Lpin2-213ENSMUST00000156570 1586 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Trub1Q8C0D0 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Trub1Q8C0D0 Psmd4-202ENSMUST00000107237 1332 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
Trub1Q8C0D0 Adrb3-202ENSMUST00000117565 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Trub1Q8C0D0 Cisd2-202ENSMUST00000120988 1363 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Trub1Q8C0D0 Fbxo7-203ENSMUST00000120344 1655 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Trub1Q8C0D0 Cdipt-201ENSMUST00000032920 1974 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Trub1Q8C0D0 Slc23a4-205ENSMUST00000201355 2003 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.46
Trub1Q8C0D0 Rasl10b-204ENSMUST00000175848 3249 ntTSL 1 (best) BASIC17.89■□□□□ 0.46
Trub1Q8C0D0 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.46
Trub1Q8C0D0 Donson-201ENSMUST00000023682 2360 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Trub1Q8C0D0 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
Trub1Q8C0D0 Mrpl13-205ENSMUST00000172387 1223 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Trub1Q8C0D0 Gm34933-201ENSMUST00000203245 1067 ntTSL 5 BASIC17.89■□□□□ 0.45
Trub1Q8C0D0 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC17.89■□□□□ 0.45
Trub1Q8C0D0 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Trub1Q8C0D0 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
Trub1Q8C0D0 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC17.89■□□□□ 0.45
Trub1Q8C0D0 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Trub1Q8C0D0 Zdhhc6-207ENSMUST00000224897 2168 ntAPPRIS P1 BASIC17.89■□□□□ 0.45
Trub1Q8C0D0 Scly-201ENSMUST00000027532 2202 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Trub1Q8C0D0 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Trub1Q8C0D0 Dnm1-216ENSMUST00000201494 2732 ntTSL 5 BASIC17.88■□□□□ 0.45
Trub1Q8C0D0 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
Trub1Q8C0D0 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Trub1Q8C0D0 Glrx2-210ENSMUST00000185362 3337 ntAPPRIS P4 TSL 1 (best) BASIC17.88■□□□□ 0.45
Trub1Q8C0D0 Gm24841-201ENSMUST00000158676 357 ntBASIC17.88■□□□□ 0.45
Trub1Q8C0D0 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Trub1Q8C0D0 Rmnd1-201ENSMUST00000042251 3139 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Trub1Q8C0D0 Fam20c-201ENSMUST00000026972 3582 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Trub1Q8C0D0 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Trub1Q8C0D0 Ankra2-203ENSMUST00000123924 2328 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Trub1Q8C0D0 Dus3l-201ENSMUST00000007747 2303 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Trub1Q8C0D0 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Trub1Q8C0D0 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Trub1Q8C0D0 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Trub1Q8C0D0 9430097D07Rik-201ENSMUST00000100190 1501 ntAPPRIS P1 BASIC17.88■□□□□ 0.45
Trub1Q8C0D0 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
Trub1Q8C0D0 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Trub1Q8C0D0 Cerkl-205ENSMUST00000143974 1623 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Trub1Q8C0D0 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Trub1Q8C0D0 Gm10649-203ENSMUST00000148066 1812 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Trub1Q8C0D0 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Trub1Q8C0D0 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC17.87■□□□□ 0.45
Trub1Q8C0D0 Creb1-207ENSMUST00000187811 1255 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Trub1Q8C0D0 Gm9694-201ENSMUST00000193347 1189 ntBASIC17.87■□□□□ 0.45
Retrieved 100 of 76,532 protein–RNA pairs in 52.4 ms