Protein–RNA interactions for Protein: Q8BYH8

Chd9, Chromodomain-helicase-DNA-binding protein 9, mousemouse

Predictions only

Length 2,885 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd9Q8BYH8 Trmo-201ENSMUST00000030015 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Chd9Q8BYH8 Plac9a-201ENSMUST00000052286 1555 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Chd9Q8BYH8 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Chd9Q8BYH8 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Chd9Q8BYH8 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Chd9Q8BYH8 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
Chd9Q8BYH8 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Chd9Q8BYH8 Tmem217-201ENSMUST00000114683 904 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Chd9Q8BYH8 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC13.69□□□□□ -0.22
Chd9Q8BYH8 Gm1818-201ENSMUST00000169406 1184 ntBASIC13.69□□□□□ -0.22
Chd9Q8BYH8 Gm7213-201ENSMUST00000215977 950 ntBASIC13.69□□□□□ -0.22
Chd9Q8BYH8 Sox6os-201ENSMUST00000032900 420 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Chd9Q8BYH8 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC13.69□□□□□ -0.22
Chd9Q8BYH8 Ap1s1-201ENSMUST00000111080 1353 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Chd9Q8BYH8 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Chd9Q8BYH8 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Chd9Q8BYH8 Fam53b-204ENSMUST00000106165 1232 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Chd9Q8BYH8 Ndufab1-ps-201ENSMUST00000166096 468 ntBASIC13.69□□□□□ -0.22
Chd9Q8BYH8 Gm20661-203ENSMUST00000177368 900 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
Chd9Q8BYH8 Olfr571-201ENSMUST00000061738 969 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
Chd9Q8BYH8 A830031A19Rik-201ENSMUST00000068360 757 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Chd9Q8BYH8 Ube2f-204ENSMUST00000178627 1363 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Chd9Q8BYH8 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Chd9Q8BYH8 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Chd9Q8BYH8 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Chd9Q8BYH8 Gm10561-201ENSMUST00000181563 1943 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Chd9Q8BYH8 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC13.68□□□□□ -0.22
Chd9Q8BYH8 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Chd9Q8BYH8 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Chd9Q8BYH8 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Chd9Q8BYH8 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Chd9Q8BYH8 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Chd9Q8BYH8 Gm11127-201ENSMUST00000113742 1344 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Chd9Q8BYH8 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Chd9Q8BYH8 Gm14127-201ENSMUST00000117906 678 ntBASIC13.68□□□□□ -0.22
Chd9Q8BYH8 Ankrd65-202ENSMUST00000165000 1140 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
Chd9Q8BYH8 Chchd1-203ENSMUST00000224633 557 ntBASIC13.68□□□□□ -0.22
Chd9Q8BYH8 1500035N22Rik-201ENSMUST00000075081 865 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Chd9Q8BYH8 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC13.68□□□□□ -0.22
Chd9Q8BYH8 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC13.68□□□□□ -0.22
Chd9Q8BYH8 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Chd9Q8BYH8 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Chd9Q8BYH8 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Chd9Q8BYH8 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
Chd9Q8BYH8 Ndufb6-202ENSMUST00000108108 480 ntTSL 3 BASIC13.68□□□□□ -0.22
Chd9Q8BYH8 Kir3dl1-201ENSMUST00000113104 1031 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Chd9Q8BYH8 Gm25911-201ENSMUST00000157621 56 ntBASIC13.68□□□□□ -0.22
Chd9Q8BYH8 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC13.68□□□□□ -0.22
Chd9Q8BYH8 Il3ra-205ENSMUST00000224877 1128 ntAPPRIS ALT2 BASIC13.68□□□□□ -0.22
Chd9Q8BYH8 Alkbh6-201ENSMUST00000060834 982 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Chd9Q8BYH8 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Chd9Q8BYH8 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Chd9Q8BYH8 AC108858.1-201ENSMUST00000228461 1498 ntBASIC13.67□□□□□ -0.22
Chd9Q8BYH8 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Chd9Q8BYH8 4933405L10Rik-201ENSMUST00000013302 1214 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Chd9Q8BYH8 Gm16105-201ENSMUST00000156926 697 ntTSL 3 BASIC13.67□□□□□ -0.22
Chd9Q8BYH8 Surf1-201ENSMUST00000015934 1173 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Chd9Q8BYH8 Gm26515-201ENSMUST00000181141 996 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Chd9Q8BYH8 F420014N23Rik-202ENSMUST00000219079 659 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Chd9Q8BYH8 AC140375.2-201ENSMUST00000225283 584 ntBASIC13.67□□□□□ -0.22
Chd9Q8BYH8 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Chd9Q8BYH8 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Chd9Q8BYH8 Gm10575-201ENSMUST00000097947 1671 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Chd9Q8BYH8 Gm5648-201ENSMUST00000122244 1587 ntBASIC13.67□□□□□ -0.22
Chd9Q8BYH8 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC13.67□□□□□ -0.22
Chd9Q8BYH8 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Chd9Q8BYH8 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC13.67□□□□□ -0.22
Chd9Q8BYH8 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Chd9Q8BYH8 Tsc22d1-201ENSMUST00000022587 1762 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Chd9Q8BYH8 Rassf1-201ENSMUST00000010211 1727 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Chd9Q8BYH8 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Chd9Q8BYH8 4930526A20Rik-201ENSMUST00000134228 941 ntBASIC13.67□□□□□ -0.22
Chd9Q8BYH8 Gm23547-201ENSMUST00000158210 271 ntBASIC13.67□□□□□ -0.22
Chd9Q8BYH8 Dad1-201ENSMUST00000022781 878 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Chd9Q8BYH8 Serf2-201ENSMUST00000099475 525 ntTSL 2 BASIC13.67□□□□□ -0.22
Chd9Q8BYH8 Bmpr1b-203ENSMUST00000106230 2147 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Chd9Q8BYH8 Gpr6-201ENSMUST00000061796 1786 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Chd9Q8BYH8 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Chd9Q8BYH8 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
Chd9Q8BYH8 Gm20460-201ENSMUST00000168709 1572 ntTSL 5 BASIC13.66□□□□□ -0.22
Chd9Q8BYH8 Steap1-201ENSMUST00000015796 1230 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Chd9Q8BYH8 9530052E02Rik-201ENSMUST00000180750 949 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Chd9Q8BYH8 Gm44107-201ENSMUST00000203242 573 ntTSL 2 BASIC13.66□□□□□ -0.22
Chd9Q8BYH8 Lamtor4-201ENSMUST00000062067 877 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Chd9Q8BYH8 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Chd9Q8BYH8 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Chd9Q8BYH8 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Chd9Q8BYH8 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
Chd9Q8BYH8 A930029G22Rik-201ENSMUST00000181032 1710 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Chd9Q8BYH8 Creld1-201ENSMUST00000032422 2306 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Chd9Q8BYH8 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Chd9Q8BYH8 Tmem47-203ENSMUST00000171953 1801 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Chd9Q8BYH8 Mcfd2-201ENSMUST00000024963 1823 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Chd9Q8BYH8 2810468N07Rik-201ENSMUST00000163493 1349 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Chd9Q8BYH8 Pqlc1-208ENSMUST00000144468 1050 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Chd9Q8BYH8 Utp23-204ENSMUST00000161651 582 ntTSL 5 BASIC13.66□□□□□ -0.22
Chd9Q8BYH8 Gm37805-201ENSMUST00000192612 1094 ntBASIC13.66□□□□□ -0.22
Chd9Q8BYH8 AC155729.1-201ENSMUST00000227758 544 ntBASIC13.66□□□□□ -0.22
Chd9Q8BYH8 Pfn3-201ENSMUST00000054146 545 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
Chd9Q8BYH8 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 24.5 ms