Protein–RNA interactions for Protein: Q8BKX6

Smg1, Serine/threonine-protein kinase SMG1, mousemouse

Known RBP Predictions only

Length 3,658 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smg1Q8BKX6 Sae1-203ENSMUST00000210999 1254 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
Smg1Q8BKX6 Tnp2-201ENSMUST00000051297 549 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
Smg1Q8BKX6 Tmem35b-201ENSMUST00000094712 1120 ntAPPRIS P2 TSL 1 (best) BASIC14.71□□□□□ -0.06
Smg1Q8BKX6 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC14.71□□□□□ -0.06
Smg1Q8BKX6 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Smg1Q8BKX6 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Smg1Q8BKX6 Eme2-202ENSMUST00000121542 1521 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Smg1Q8BKX6 Nrn1l-202ENSMUST00000118920 603 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Smg1Q8BKX6 Tsen15-205ENSMUST00000162371 431 ntTSL 5 BASIC14.7□□□□□ -0.06
Smg1Q8BKX6 Hsd3b2-203ENSMUST00000177651 1122 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
Smg1Q8BKX6 Gm5364-201ENSMUST00000216789 889 ntBASIC14.7□□□□□ -0.06
Smg1Q8BKX6 Rhbdl1-202ENSMUST00000183929 1349 ntTSL 5 BASIC14.7□□□□□ -0.06
Smg1Q8BKX6 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Smg1Q8BKX6 Bcar1-201ENSMUST00000166232 3142 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
Smg1Q8BKX6 Cnn2-202ENSMUST00000105374 926 ntTSL 5 BASIC14.7□□□□□ -0.06
Smg1Q8BKX6 Gm128-202ENSMUST00000107197 1289 ntTSL 2 BASIC14.7□□□□□ -0.06
Smg1Q8BKX6 Rhoc-201ENSMUST00000002303 1202 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Smg1Q8BKX6 Stam2-202ENSMUST00000127316 1928 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Smg1Q8BKX6 Gm5953-201ENSMUST00000220644 2616 ntBASIC14.7□□□□□ -0.06
Smg1Q8BKX6 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Smg1Q8BKX6 H2-DMa-201ENSMUST00000042121 1555 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Smg1Q8BKX6 Pih1d1-202ENSMUST00000107811 1072 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Smg1Q8BKX6 Gm1401-201ENSMUST00000122048 772 ntBASIC14.7□□□□□ -0.06
Smg1Q8BKX6 4933405L10Rik-201ENSMUST00000013302 1214 ntAPPRIS P2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Smg1Q8BKX6 E2f7-205ENSMUST00000173634 827 ntTSL 2 BASIC14.7□□□□□ -0.06
Smg1Q8BKX6 Syngr2-206ENSMUST00000177131 935 ntAPPRIS ALT2 TSL 3 BASIC14.7□□□□□ -0.06
Smg1Q8BKX6 Cebpzos-201ENSMUST00000063817 753 ntAPPRIS P1 TSL 2 BASIC14.7□□□□□ -0.06
Smg1Q8BKX6 Hist1h2bg-201ENSMUST00000079251 618 ntAPPRIS P1 BASIC14.7□□□□□ -0.06
Smg1Q8BKX6 Hist1h2bn-201ENSMUST00000091709 381 ntAPPRIS P1 BASIC14.7□□□□□ -0.06
Smg1Q8BKX6 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Smg1Q8BKX6 Echdc2-203ENSMUST00000116307 893 ntTSL 5 BASIC14.69□□□□□ -0.06
Smg1Q8BKX6 Izumo1r-203ENSMUST00000117620 1095 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Smg1Q8BKX6 Surf1-201ENSMUST00000015934 1173 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Smg1Q8BKX6 Gm29629-201ENSMUST00000187926 386 ntTSL 3 BASIC14.69□□□□□ -0.06
Smg1Q8BKX6 Il3ra-202ENSMUST00000223589 738 ntBASIC14.69□□□□□ -0.06
Smg1Q8BKX6 Aldh7a1-201ENSMUST00000066208 1914 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
Smg1Q8BKX6 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Smg1Q8BKX6 Gm26752-201ENSMUST00000181086 1537 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Smg1Q8BKX6 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Smg1Q8BKX6 Gm12895-201ENSMUST00000122214 226 ntBASIC14.69□□□□□ -0.06
Smg1Q8BKX6 Med11-202ENSMUST00000151013 445 ntTSL 2 BASIC14.69□□□□□ -0.06
Smg1Q8BKX6 Gm29456-201ENSMUST00000189894 768 ntTSL 3 BASIC14.69□□□□□ -0.06
Smg1Q8BKX6 2810030D12Rik-203ENSMUST00000190461 1039 ntBASIC14.69□□□□□ -0.06
Smg1Q8BKX6 Hikeshi-207ENSMUST00000207309 835 ntTSL 5 BASIC14.69□□□□□ -0.06
Smg1Q8BKX6 Epc1-202ENSMUST00000050542 565 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Smg1Q8BKX6 Trim25-202ENSMUST00000100627 1433 ntTSL 5 BASIC14.69□□□□□ -0.06
Smg1Q8BKX6 Stard6-201ENSMUST00000114959 1496 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Smg1Q8BKX6 Emd-201ENSMUST00000002029 1595 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Smg1Q8BKX6 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Smg1Q8BKX6 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Smg1Q8BKX6 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Smg1Q8BKX6 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC14.69□□□□□ -0.06
Smg1Q8BKX6 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Smg1Q8BKX6 Gm8000-201ENSMUST00000188378 592 ntBASIC14.69□□□□□ -0.06
Smg1Q8BKX6 Spg21-202ENSMUST00000213957 1302 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Smg1Q8BKX6 AC120002.2-201ENSMUST00000220205 773 ntBASIC14.69□□□□□ -0.06
Smg1Q8BKX6 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Smg1Q8BKX6 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Smg1Q8BKX6 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Smg1Q8BKX6 Wnt10b-202ENSMUST00000166022 1594 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Smg1Q8BKX6 Wdr55-201ENSMUST00000049323 1498 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Smg1Q8BKX6 Sardhos-201ENSMUST00000170435 265 ntTSL 3 BASIC14.68□□□□□ -0.06
Smg1Q8BKX6 Tecr-201ENSMUST00000019382 1158 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Smg1Q8BKX6 Ube2f-201ENSMUST00000059743 1154 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Smg1Q8BKX6 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Smg1Q8BKX6 Slc7a10-201ENSMUST00000001854 1953 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Smg1Q8BKX6 Arrdc1-201ENSMUST00000028349 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Smg1Q8BKX6 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Smg1Q8BKX6 Bean1-201ENSMUST00000093245 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Smg1Q8BKX6 Ndufv2-203ENSMUST00000143987 1540 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Smg1Q8BKX6 Eif6-201ENSMUST00000029142 1500 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Smg1Q8BKX6 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Smg1Q8BKX6 Timm13-201ENSMUST00000020440 1225 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Smg1Q8BKX6 Nme3-201ENSMUST00000024978 715 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Smg1Q8BKX6 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Smg1Q8BKX6 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Smg1Q8BKX6 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Smg1Q8BKX6 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Smg1Q8BKX6 Rpl39l-202ENSMUST00000121292 550 ntAPPRIS P1 TSL 2 BASIC14.68□□□□□ -0.06
Smg1Q8BKX6 Zfp747-202ENSMUST00000205832 618 ntTSL 3 BASIC14.68□□□□□ -0.06
Smg1Q8BKX6 Tdrd12-201ENSMUST00000032701 1620 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Smg1Q8BKX6 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Smg1Q8BKX6 Bend6-202ENSMUST00000115161 2231 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Smg1Q8BKX6 Tpd52l1-201ENSMUST00000000305 1308 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Smg1Q8BKX6 Urah-202ENSMUST00000106050 719 ntAPPRIS ALT2 TSL 2 BASIC14.67□□□□□ -0.06
Smg1Q8BKX6 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC14.67□□□□□ -0.06
Smg1Q8BKX6 Gm14822-201ENSMUST00000122247 291 ntBASIC14.67□□□□□ -0.06
Smg1Q8BKX6 Gm10576-201ENSMUST00000191927 825 ntBASIC14.67□□□□□ -0.06
Smg1Q8BKX6 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Smg1Q8BKX6 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Smg1Q8BKX6 Fam69a-201ENSMUST00000031198 2721 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Smg1Q8BKX6 Gm8909-203ENSMUST00000173353 1428 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
Smg1Q8BKX6 Rpl3l-202ENSMUST00000170239 1375 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
Smg1Q8BKX6 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
Smg1Q8BKX6 Cnbp-202ENSMUST00000113617 952 ntTSL 5 BASIC14.67□□□□□ -0.06
Smg1Q8BKX6 1190007I07Rik-202ENSMUST00000176200 586 ntAPPRIS P1 TSL 2 BASIC14.67□□□□□ -0.06
Smg1Q8BKX6 1190007I07Rik-203ENSMUST00000183363 406 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Smg1Q8BKX6 AC153556.1-201ENSMUST00000215135 794 ntTSL 5 BASIC14.67□□□□□ -0.06
Smg1Q8BKX6 1190007I07Rik-201ENSMUST00000079648 716 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Smg1Q8BKX6 Blcap-201ENSMUST00000088494 2108 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Retrieved 100 of 76,532 protein–RNA pairs in 31.3 ms