Protein–RNA interactions for Protein: Q80XC3

Usp6nl, USP6 N-terminal-like protein, mousemouse

Predictions only

Length 819 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp6nlQ80XC3 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Usp6nlQ80XC3 Blcap-201ENSMUST00000088494 2108 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Usp6nlQ80XC3 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
Usp6nlQ80XC3 Bnip2-203ENSMUST00000117450 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Usp6nlQ80XC3 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Usp6nlQ80XC3 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Usp6nlQ80XC3 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Usp6nlQ80XC3 Atp5g1-202ENSMUST00000107684 596 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Usp6nlQ80XC3 Tmsb10-202ENSMUST00000114049 690 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Usp6nlQ80XC3 Gm11860-201ENSMUST00000122346 1010 ntBASIC19.15■□□□□ 0.66
Usp6nlQ80XC3 Lamtor5-201ENSMUST00000145735 881 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Usp6nlQ80XC3 Has3-202ENSMUST00000175987 1154 ntTSL 5 BASIC19.15■□□□□ 0.66
Usp6nlQ80XC3 Pdrg1-201ENSMUST00000028972 1273 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Usp6nlQ80XC3 Imp3-201ENSMUST00000034827 924 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
Usp6nlQ80XC3 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Usp6nlQ80XC3 Pdgfa-203ENSMUST00000110896 1363 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
Usp6nlQ80XC3 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC19.15■□□□□ 0.66
Usp6nlQ80XC3 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC19.15■□□□□ 0.66
Usp6nlQ80XC3 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Usp6nlQ80XC3 Gm26885-201ENSMUST00000181920 1688 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
Usp6nlQ80XC3 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Usp6nlQ80XC3 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Usp6nlQ80XC3 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Usp6nlQ80XC3 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Usp6nlQ80XC3 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Usp6nlQ80XC3 Fgf8-205ENSMUST00000111927 843 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Usp6nlQ80XC3 Atp6v0b-208ENSMUST00000150204 935 ntTSL 5 BASIC19.14■□□□□ 0.65
Usp6nlQ80XC3 1500009L16Rik-201ENSMUST00000150459 1194 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Usp6nlQ80XC3 Gm27357-201ENSMUST00000183754 135 ntBASIC19.14■□□□□ 0.65
Usp6nlQ80XC3 Gm38973-201ENSMUST00000206810 878 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Usp6nlQ80XC3 4933406B15Rik-201ENSMUST00000220065 1182 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Usp6nlQ80XC3 Mrpl36-203ENSMUST00000222030 680 ntAPPRIS P1 TSL 3 BASIC19.14■□□□□ 0.65
Usp6nlQ80XC3 Fam105a-203ENSMUST00000226170 3043 ntBASIC19.14■□□□□ 0.65
Usp6nlQ80XC3 Gpsm3-201ENSMUST00000038244 1343 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Usp6nlQ80XC3 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC19.14■□□□□ 0.65
Usp6nlQ80XC3 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC19.14■□□□□ 0.65
Usp6nlQ80XC3 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Usp6nlQ80XC3 Bin2-204ENSMUST00000182775 1908 ntTSL 5 BASIC19.13■□□□□ 0.65
Usp6nlQ80XC3 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Usp6nlQ80XC3 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
Usp6nlQ80XC3 Tfpt-202ENSMUST00000108641 1166 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Usp6nlQ80XC3 Srpx-202ENSMUST00000115543 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Usp6nlQ80XC3 Nme3-201ENSMUST00000024978 715 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Usp6nlQ80XC3 Pdcd2l-201ENSMUST00000002710 1295 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Usp6nlQ80XC3 Etfb-201ENSMUST00000004729 893 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Usp6nlQ80XC3 Tmem254b-201ENSMUST00000022418 1447 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Usp6nlQ80XC3 Acot7-206ENSMUST00000167926 1505 ntAPPRIS P4 TSL 1 (best) BASIC19.13■□□□□ 0.65
Usp6nlQ80XC3 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC19.13■□□□□ 0.65
Usp6nlQ80XC3 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Usp6nlQ80XC3 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC19.13■□□□□ 0.65
Usp6nlQ80XC3 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
Usp6nlQ80XC3 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Usp6nlQ80XC3 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Usp6nlQ80XC3 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Usp6nlQ80XC3 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Usp6nlQ80XC3 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Usp6nlQ80XC3 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
Usp6nlQ80XC3 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Usp6nlQ80XC3 Aqp5-202ENSMUST00000169082 1551 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Usp6nlQ80XC3 Dpy30-201ENSMUST00000112571 790 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
Usp6nlQ80XC3 9130019P16Rik-201ENSMUST00000135612 1019 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Usp6nlQ80XC3 Gm37722-201ENSMUST00000193757 208 ntBASIC19.12■□□□□ 0.65
Usp6nlQ80XC3 Umpk-ps-201ENSMUST00000211897 827 ntBASIC19.12■□□□□ 0.65
Usp6nlQ80XC3 Otx2os1-206ENSMUST00000228153 787 ntBASIC19.12■□□□□ 0.65
Usp6nlQ80XC3 Upk3a-201ENSMUST00000023070 1106 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Usp6nlQ80XC3 Tmem35b-201ENSMUST00000094712 1120 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Usp6nlQ80XC3 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Usp6nlQ80XC3 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Usp6nlQ80XC3 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Usp6nlQ80XC3 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Usp6nlQ80XC3 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Usp6nlQ80XC3 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
Usp6nlQ80XC3 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
Usp6nlQ80XC3 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Usp6nlQ80XC3 Idnk-204ENSMUST00000226010 1898 ntBASIC19.11■□□□□ 0.65
Usp6nlQ80XC3 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Usp6nlQ80XC3 Prps1l3-201ENSMUST00000139049 1720 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Usp6nlQ80XC3 Eva1c-201ENSMUST00000037539 1698 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Usp6nlQ80XC3 Hmg20b-204ENSMUST00000122993 1502 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Usp6nlQ80XC3 Stard6-201ENSMUST00000114959 1496 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Usp6nlQ80XC3 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Usp6nlQ80XC3 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Usp6nlQ80XC3 Gsg1-201ENSMUST00000087729 1307 ntAPPRIS P4 TSL 1 (best) BASIC19.11■□□□□ 0.65
Usp6nlQ80XC3 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Usp6nlQ80XC3 Fndc11-202ENSMUST00000108835 1154 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
Usp6nlQ80XC3 Gm7153-201ENSMUST00000117092 455 ntBASIC19.11■□□□□ 0.65
Usp6nlQ80XC3 Fxyd5-208ENSMUST00000161805 1166 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
Usp6nlQ80XC3 0610025J13Rik-203ENSMUST00000180374 713 ntTSL 5 BASIC19.11■□□□□ 0.65
Usp6nlQ80XC3 Irak1bp1-201ENSMUST00000034783 1159 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Usp6nlQ80XC3 Cldn22-201ENSMUST00000038693 995 ntAPPRIS P1 BASIC19.11■□□□□ 0.65
Usp6nlQ80XC3 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Usp6nlQ80XC3 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Usp6nlQ80XC3 Aida-206ENSMUST00000193625 1810 ntTSL 3 BASIC19.11■□□□□ 0.65
Usp6nlQ80XC3 Prmt6-201ENSMUST00000106567 2450 ntAPPRIS P1 BASIC19.11■□□□□ 0.65
Usp6nlQ80XC3 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Usp6nlQ80XC3 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Usp6nlQ80XC3 Tyk2-205ENSMUST00000214864 1662 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Usp6nlQ80XC3 Il9r-204ENSMUST00000142396 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Usp6nlQ80XC3 Trim54-202ENSMUST00000202769 1408 ntAPPRIS ALT1 TSL 5 BASIC19.1■□□□□ 0.65
Usp6nlQ80XC3 Tmem241-205ENSMUST00000209859 1426 ntAPPRIS P4 TSL 1 (best) BASIC19.1■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 54.2 ms