Protein–RNA interactions for Protein: Q80X41

Vrk1, Serine/threonine-protein kinase VRK1, mousemouse

Predictions only

Length 440 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vrk1Q80X41 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
Vrk1Q80X41 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Vrk1Q80X41 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Vrk1Q80X41 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
Vrk1Q80X41 Neurl1b-201ENSMUST00000053020 6195 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Vrk1Q80X41 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Vrk1Q80X41 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Vrk1Q80X41 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Vrk1Q80X41 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Vrk1Q80X41 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC16.56■□□□□ 0.24
Vrk1Q80X41 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC16.56■□□□□ 0.24
Vrk1Q80X41 Gm42900-201ENSMUST00000197184 2167 ntBASIC16.56■□□□□ 0.24
Vrk1Q80X41 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
Vrk1Q80X41 Gm14859-201ENSMUST00000117752 357 ntBASIC16.56■□□□□ 0.24
Vrk1Q80X41 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Vrk1Q80X41 Prr3-209ENSMUST00000174849 581 ntTSL 2 BASIC16.56■□□□□ 0.24
Vrk1Q80X41 Ak6-201ENSMUST00000022135 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Vrk1Q80X41 Dctn3-201ENSMUST00000030158 973 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Vrk1Q80X41 Rplp2-201ENSMUST00000084434 964 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Vrk1Q80X41 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Vrk1Q80X41 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
Vrk1Q80X41 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Vrk1Q80X41 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Vrk1Q80X41 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Vrk1Q80X41 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Vrk1Q80X41 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Vrk1Q80X41 Rnf169-201ENSMUST00000080817 7147 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
Vrk1Q80X41 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Vrk1Q80X41 Mindy2-201ENSMUST00000049031 8081 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Vrk1Q80X41 Arhgap21-201ENSMUST00000114594 7351 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
Vrk1Q80X41 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Vrk1Q80X41 Dbndd2-204ENSMUST00000109350 1055 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
Vrk1Q80X41 Mdfi-203ENSMUST00000113280 1281 ntTSL 5 BASIC16.55■□□□□ 0.24
Vrk1Q80X41 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC16.55■□□□□ 0.24
Vrk1Q80X41 Yif1b-201ENSMUST00000032809 1111 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
Vrk1Q80X41 Gm43213-201ENSMUST00000151866 1790 ntBASIC16.55■□□□□ 0.24
Vrk1Q80X41 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Vrk1Q80X41 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
Vrk1Q80X41 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Vrk1Q80X41 Dus3l-201ENSMUST00000007747 2303 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Vrk1Q80X41 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Vrk1Q80X41 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC16.54■□□□□ 0.24
Vrk1Q80X41 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Vrk1Q80X41 Cklf-208ENSMUST00000212433 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Vrk1Q80X41 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Vrk1Q80X41 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC16.54■□□□□ 0.24
Vrk1Q80X41 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Vrk1Q80X41 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Vrk1Q80X41 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Vrk1Q80X41 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC16.54■□□□□ 0.24
Vrk1Q80X41 Gm15545-202ENSMUST00000141011 899 ntTSL 3 BASIC16.54■□□□□ 0.24
Vrk1Q80X41 Gm17349-201ENSMUST00000163472 300 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
Vrk1Q80X41 Cdc34-202ENSMUST00000166603 1078 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Vrk1Q80X41 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Vrk1Q80X41 Tppp3-202ENSMUST00000176419 719 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Vrk1Q80X41 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Vrk1Q80X41 Pdxk-ps-203ENSMUST00000183934 680 ntTSL 3 BASIC16.54■□□□□ 0.24
Vrk1Q80X41 Hint1-201ENSMUST00000020504 636 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Vrk1Q80X41 Coq7-201ENSMUST00000032887 914 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Vrk1Q80X41 Nkx2-6-201ENSMUST00000062437 1134 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Vrk1Q80X41 BC048679-201ENSMUST00000073406 522 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
Vrk1Q80X41 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Vrk1Q80X41 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
Vrk1Q80X41 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Vrk1Q80X41 Skap1-203ENSMUST00000100521 1539 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Vrk1Q80X41 Skap1-204ENSMUST00000103154 1507 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
Vrk1Q80X41 Rasl10b-202ENSMUST00000108140 3156 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
Vrk1Q80X41 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC16.54■□□□□ 0.24
Vrk1Q80X41 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Vrk1Q80X41 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
Vrk1Q80X41 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Vrk1Q80X41 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC16.53■□□□□ 0.24
Vrk1Q80X41 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
Vrk1Q80X41 Nit1-202ENSMUST00000111295 1335 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
Vrk1Q80X41 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC16.53■□□□□ 0.24
Vrk1Q80X41 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Vrk1Q80X41 Gm12781-201ENSMUST00000146269 395 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Vrk1Q80X41 Snx15-207ENSMUST00000154601 767 ntTSL 5 BASIC16.53■□□□□ 0.24
Vrk1Q80X41 Gm27389-201ENSMUST00000183622 195 ntBASIC16.53■□□□□ 0.24
Vrk1Q80X41 Gm7370-201ENSMUST00000219471 767 ntBASIC16.53■□□□□ 0.24
Vrk1Q80X41 Il17a-201ENSMUST00000027061 1171 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Vrk1Q80X41 Fam92a-201ENSMUST00000087052 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Vrk1Q80X41 Zfp800-203ENSMUST00000115321 2699 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Vrk1Q80X41 Dmtn-210ENSMUST00000228824 2377 ntBASIC16.53■□□□□ 0.24
Vrk1Q80X41 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Vrk1Q80X41 B4galt5-201ENSMUST00000109221 4210 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Vrk1Q80X41 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Vrk1Q80X41 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Vrk1Q80X41 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Vrk1Q80X41 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Vrk1Q80X41 Dab2-208ENSMUST00000160134 1374 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.24
Vrk1Q80X41 Blcap-201ENSMUST00000088494 2108 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Vrk1Q80X41 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
Vrk1Q80X41 Plac9a-201ENSMUST00000052286 1555 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Vrk1Q80X41 Dscc1-201ENSMUST00000023059 1324 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.24
Vrk1Q80X41 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Vrk1Q80X41 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Vrk1Q80X41 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Vrk1Q80X41 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Vrk1Q80X41 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 20.4 ms