Protein–RNA interactions for Protein: Q80UU2

Rpp38, Ribonuclease P protein subunit p38, mousemouse

Predictions only

Length 280 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpp38Q80UU2 Ctsh-201ENSMUST00000034915 1617 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Rpp38Q80UU2 Gm15556-201ENSMUST00000122904 663 ntTSL 5 BASIC17.33■□□□□ 0.36
Rpp38Q80UU2 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Rpp38Q80UU2 Gm28374-201ENSMUST00000162374 728 ntAPPRIS P1 TSL 3 BASIC17.33■□□□□ 0.36
Rpp38Q80UU2 Gm45148-201ENSMUST00000208578 513 ntTSL 5 BASIC17.33■□□□□ 0.36
Rpp38Q80UU2 Odf3b-204ENSMUST00000227834 930 ntBASIC17.33■□□□□ 0.36
Rpp38Q80UU2 Gm10549-201ENSMUST00000097634 450 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
Rpp38Q80UU2 Gm7579-201ENSMUST00000097943 732 ntAPPRIS P1 BASIC17.33■□□□□ 0.36
Rpp38Q80UU2 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Rpp38Q80UU2 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC17.33■□□□□ 0.36
Rpp38Q80UU2 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Rpp38Q80UU2 Nr1h2-213ENSMUST00000167197 1944 ntAPPRIS P3 TSL 5 BASIC17.33■□□□□ 0.36
Rpp38Q80UU2 Ecel1-201ENSMUST00000027463 2695 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Rpp38Q80UU2 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Rpp38Q80UU2 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC17.32■□□□□ 0.36
Rpp38Q80UU2 Prss54-205ENSMUST00000213096 1501 ntAPPRIS P3 TSL 5 BASIC17.32■□□□□ 0.36
Rpp38Q80UU2 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Rpp38Q80UU2 Aig1-201ENSMUST00000019942 1439 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Rpp38Q80UU2 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC17.32■□□□□ 0.36
Rpp38Q80UU2 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
Rpp38Q80UU2 Ntrk1-201ENSMUST00000029712 2588 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Rpp38Q80UU2 Tm4sf19-201ENSMUST00000115149 1257 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Rpp38Q80UU2 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Rpp38Q80UU2 Snx12-204ENSMUST00000156473 1114 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Rpp38Q80UU2 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC17.32■□□□□ 0.36
Rpp38Q80UU2 Sae1-203ENSMUST00000210999 1254 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Rpp38Q80UU2 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC17.32■□□□□ 0.36
Rpp38Q80UU2 AC156016.1-201ENSMUST00000227190 1035 ntBASIC17.32■□□□□ 0.36
Rpp38Q80UU2 Tfap2a-209ENSMUST00000225180 1828 ntBASIC17.32■□□□□ 0.36
Rpp38Q80UU2 Mterf1a-202ENSMUST00000117463 2413 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Rpp38Q80UU2 Mag-201ENSMUST00000040548 2419 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Rpp38Q80UU2 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Rpp38Q80UU2 Slc35g1-201ENSMUST00000054098 3471 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Rpp38Q80UU2 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Rpp38Q80UU2 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
Rpp38Q80UU2 B4galt5-201ENSMUST00000109221 4210 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Rpp38Q80UU2 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Rpp38Q80UU2 Csf3-201ENSMUST00000038886 1413 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Rpp38Q80UU2 Sars2-201ENSMUST00000094632 1868 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Rpp38Q80UU2 Fam57b-201ENSMUST00000079423 2328 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Rpp38Q80UU2 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Rpp38Q80UU2 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Rpp38Q80UU2 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Rpp38Q80UU2 Whrn-205ENSMUST00000095038 2665 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Rpp38Q80UU2 Carmn-201ENSMUST00000181155 1778 ntTSL 2 BASIC17.31■□□□□ 0.36
Rpp38Q80UU2 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC17.31■□□□□ 0.36
Rpp38Q80UU2 Echdc2-204ENSMUST00000116309 1238 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Rpp38Q80UU2 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC17.31■□□□□ 0.36
Rpp38Q80UU2 Ets1-206ENSMUST00000184887 2107 ntTSL 5 BASIC17.31■□□□□ 0.36
Rpp38Q80UU2 C430014B12Rik-202ENSMUST00000186858 657 ntTSL 2 BASIC17.31■□□□□ 0.36
Rpp38Q80UU2 Gm21814-202ENSMUST00000203277 873 ntBASIC17.31■□□□□ 0.36
Rpp38Q80UU2 Zfp787-204ENSMUST00000207628 576 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Rpp38Q80UU2 Arhgef33-211ENSMUST00000225658 473 ntBASIC17.31■□□□□ 0.36
Rpp38Q80UU2 Tpsg1-201ENSMUST00000024999 1186 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Rpp38Q80UU2 Dctn3-201ENSMUST00000030158 973 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Rpp38Q80UU2 Id1-201ENSMUST00000038368 934 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Rpp38Q80UU2 1700020N01Rik-201ENSMUST00000057341 1062 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Rpp38Q80UU2 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Rpp38Q80UU2 Ttyh3-202ENSMUST00000197452 4576 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Rpp38Q80UU2 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
Rpp38Q80UU2 Nfkbib-201ENSMUST00000032815 2061 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Rpp38Q80UU2 Ankra2-203ENSMUST00000123924 2328 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Rpp38Q80UU2 Tnfsf14-201ENSMUST00000005976 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Rpp38Q80UU2 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC17.3■□□□□ 0.36
Rpp38Q80UU2 Krt13-201ENSMUST00000007275 1654 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Rpp38Q80UU2 Agpat3-202ENSMUST00000105387 1316 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Rpp38Q80UU2 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Rpp38Q80UU2 Fiz1-203ENSMUST00000167804 2637 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Rpp38Q80UU2 Nfib-206ENSMUST00000107248 3294 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Rpp38Q80UU2 Gm13181-201ENSMUST00000120117 1069 ntBASIC17.3■□□□□ 0.36
Rpp38Q80UU2 Tlx1os-201ENSMUST00000173437 620 ntTSL 3 BASIC17.3■□□□□ 0.36
Rpp38Q80UU2 Casp3-203ENSMUST00000210534 583 ntTSL 5 BASIC17.3■□□□□ 0.36
Rpp38Q80UU2 Smim15-206ENSMUST00000226042 1092 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
Rpp38Q80UU2 Lat-201ENSMUST00000032997 1235 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Rpp38Q80UU2 Vrk2-201ENSMUST00000078362 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Rpp38Q80UU2 Card10-203ENSMUST00000170584 3220 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
Rpp38Q80UU2 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Rpp38Q80UU2 A130014A01Rik-201ENSMUST00000183021 2323 ntBASIC17.3■□□□□ 0.36
Rpp38Q80UU2 Slc23a4-205ENSMUST00000201355 2003 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
Rpp38Q80UU2 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC17.3■□□□□ 0.36
Rpp38Q80UU2 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
Rpp38Q80UU2 Ppan-201ENSMUST00000004203 1670 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Rpp38Q80UU2 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Rpp38Q80UU2 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Rpp38Q80UU2 Tacc3-203ENSMUST00000114426 2187 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
Rpp38Q80UU2 2810408A11Rik-203ENSMUST00000102580 1640 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
Rpp38Q80UU2 Gjb3-201ENSMUST00000046532 1880 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Rpp38Q80UU2 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Rpp38Q80UU2 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Rpp38Q80UU2 Clta-203ENSMUST00000107847 1121 ntTSL 5 BASIC17.29■□□□□ 0.36
Rpp38Q80UU2 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Rpp38Q80UU2 Tsfm-202ENSMUST00000120547 1271 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Rpp38Q80UU2 Gm7638-201ENSMUST00000121348 967 ntBASIC17.29■□□□□ 0.36
Rpp38Q80UU2 Mir5122-201ENSMUST00000175004 89 ntBASIC17.29■□□□□ 0.36
Rpp38Q80UU2 Coro7-202ENSMUST00000090480 1147 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Rpp38Q80UU2 Zfyve19-201ENSMUST00000090174 2008 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Rpp38Q80UU2 Cetn4-205ENSMUST00000140956 2981 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Rpp38Q80UU2 4833418N02Rik-202ENSMUST00000146560 1495 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Rpp38Q80UU2 Gpat3-203ENSMUST00000112887 3059 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Rpp38Q80UU2 Ppm1b-202ENSMUST00000112304 3262 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 31.4 ms