Protein–RNA interactions for Protein: Q80U95

Ube3c, Ubiquitin-protein ligase E3C, mousemouse

Predictions only

Length 1,083 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube3cQ80U95 Tppp3-201ENSMUST00000014990 1127 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Ube3cQ80U95 Pcyox1-206ENSMUST00000204116 546 ntTSL 5 BASIC20.53■□□□□ 0.88
Ube3cQ80U95 Rplp2-201ENSMUST00000084434 964 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Ube3cQ80U95 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Ube3cQ80U95 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Ube3cQ80U95 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Ube3cQ80U95 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
Ube3cQ80U95 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC20.53■□□□□ 0.88
Ube3cQ80U95 Sfrp2-201ENSMUST00000029625 2003 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Ube3cQ80U95 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC20.52■□□□□ 0.88
Ube3cQ80U95 Gm37194-201ENSMUST00000193092 3031 ntBASIC20.52■□□□□ 0.88
Ube3cQ80U95 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC20.52■□□□□ 0.88
Ube3cQ80U95 Gm7008-201ENSMUST00000038121 1366 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Ube3cQ80U95 Hist1h2bj-201ENSMUST00000110452 463 ntAPPRIS P1 BASIC20.52■□□□□ 0.88
Ube3cQ80U95 Hist1h2bp-202ENSMUST00000110473 621 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Ube3cQ80U95 Eif4e2-205ENSMUST00000113232 1125 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Ube3cQ80U95 Cdpf1-204ENSMUST00000144067 761 ntAPPRIS P1 TSL 2 BASIC20.52■□□□□ 0.88
Ube3cQ80U95 Gm26827-201ENSMUST00000181911 148 ntTSL 5 BASIC20.52■□□□□ 0.88
Ube3cQ80U95 Gm21057-201ENSMUST00000206022 670 ntTSL 3 BASIC20.52■□□□□ 0.88
Ube3cQ80U95 Hist1h2bm-201ENSMUST00000224651 524 ntAPPRIS P1 BASIC20.52■□□□□ 0.88
Ube3cQ80U95 4930465K10Rik-201ENSMUST00000056675 1238 ntBASIC20.52■□□□□ 0.88
Ube3cQ80U95 Zfp524-201ENSMUST00000086349 1142 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Ube3cQ80U95 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC20.52■□□□□ 0.88
Ube3cQ80U95 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC20.52■□□□□ 0.88
Ube3cQ80U95 Sgta-201ENSMUST00000005067 1969 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.87
Ube3cQ80U95 Dnajc2-201ENSMUST00000030771 2133 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Ube3cQ80U95 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Ube3cQ80U95 Dtnbp1-203ENSMUST00000220555 1589 ntAPPRIS ALT2 TSL 5 BASIC20.51■□□□□ 0.87
Ube3cQ80U95 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Ube3cQ80U95 Nr1h2-213ENSMUST00000167197 1944 ntAPPRIS P3 TSL 5 BASIC20.51■□□□□ 0.87
Ube3cQ80U95 Spout1-201ENSMUST00000100220 1805 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Ube3cQ80U95 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Ube3cQ80U95 Prmt2-202ENSMUST00000099571 2052 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
Ube3cQ80U95 Cyp4f41-ps-201ENSMUST00000126790 1077 ntBASIC20.51■□□□□ 0.87
Ube3cQ80U95 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Ube3cQ80U95 Krtcap3-201ENSMUST00000054829 904 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Ube3cQ80U95 Mtnr1b-201ENSMUST00000057920 1095 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Ube3cQ80U95 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Ube3cQ80U95 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Ube3cQ80U95 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Ube3cQ80U95 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Ube3cQ80U95 Stk32c-202ENSMUST00000165870 1883 ntTSL 5 BASIC20.5■□□□□ 0.87
Ube3cQ80U95 Cdk10-201ENSMUST00000036880 1642 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Ube3cQ80U95 Mfsd13a-201ENSMUST00000086969 2278 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Ube3cQ80U95 Gm26697-201ENSMUST00000180898 1760 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Ube3cQ80U95 Trmo-201ENSMUST00000030015 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Ube3cQ80U95 Ppdpf-201ENSMUST00000016488 1160 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Ube3cQ80U95 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Ube3cQ80U95 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Ube3cQ80U95 AC154855.1-201ENSMUST00000227353 1458 ntBASIC20.5■□□□□ 0.87
Ube3cQ80U95 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC20.49■□□□□ 0.87
Ube3cQ80U95 Ndufv3-201ENSMUST00000046288 1537 ntAPPRIS P4 TSL 1 (best) BASIC20.49■□□□□ 0.87
Ube3cQ80U95 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Ube3cQ80U95 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Ube3cQ80U95 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Ube3cQ80U95 Echdc2-203ENSMUST00000116307 893 ntTSL 5 BASIC20.49■□□□□ 0.87
Ube3cQ80U95 Zfp629-206ENSMUST00000132524 215 ntTSL 5 BASIC20.49■□□□□ 0.87
Ube3cQ80U95 Rapgef3os1-201ENSMUST00000149373 483 ntTSL 3 BASIC20.49■□□□□ 0.87
Ube3cQ80U95 Gm17349-201ENSMUST00000163472 300 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
Ube3cQ80U95 A730015C16Rik-201ENSMUST00000164855 1221 ntAPPRIS P1 BASIC20.49■□□□□ 0.87
Ube3cQ80U95 Tppp3-202ENSMUST00000176419 719 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Ube3cQ80U95 Hint2-201ENSMUST00000030192 610 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Ube3cQ80U95 Grcc10-201ENSMUST00000004389 863 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Ube3cQ80U95 2310039H08Rik-201ENSMUST00000071430 773 ntAPPRIS P1 BASIC20.49■□□□□ 0.87
Ube3cQ80U95 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Ube3cQ80U95 Camkk2-211ENSMUST00000200109 2751 ntAPPRIS P3 TSL 1 (best) BASIC20.49■□□□□ 0.87
Ube3cQ80U95 Auh-201ENSMUST00000021913 1320 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Ube3cQ80U95 Ncam2-202ENSMUST00000067602 3563 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Ube3cQ80U95 Smim3-201ENSMUST00000042710 1984 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Ube3cQ80U95 Tnfrsf25-201ENSMUST00000025706 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Ube3cQ80U95 Actl10-201ENSMUST00000104928 1501 ntAPPRIS P1 BASIC20.48■□□□□ 0.87
Ube3cQ80U95 Actl10-202ENSMUST00000226583 1501 ntBASIC20.48■□□□□ 0.87
Ube3cQ80U95 Wnt10b-207ENSMUST00000228594 1510 ntAPPRIS P1 BASIC20.48■□□□□ 0.87
Ube3cQ80U95 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Ube3cQ80U95 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Ube3cQ80U95 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Ube3cQ80U95 Gm8258-201ENSMUST00000055593 1449 ntBASIC20.48■□□□□ 0.87
Ube3cQ80U95 Lamtor5-201ENSMUST00000145735 881 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Ube3cQ80U95 Gm27389-201ENSMUST00000183622 195 ntBASIC20.48■□□□□ 0.87
Ube3cQ80U95 Kiss1r-202ENSMUST00000219745 979 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Ube3cQ80U95 Il17a-201ENSMUST00000027061 1171 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Ube3cQ80U95 Cldn22-201ENSMUST00000038693 995 ntAPPRIS P1 BASIC20.48■□□□□ 0.87
Ube3cQ80U95 Skp1a-203ENSMUST00000109072 1754 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
Ube3cQ80U95 Sfrp4-201ENSMUST00000002883 1764 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Ube3cQ80U95 Ccnd3-202ENSMUST00000171031 2113 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
Ube3cQ80U95 Ift74-201ENSMUST00000030311 2139 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
Ube3cQ80U95 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Ube3cQ80U95 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC20.48■□□□□ 0.87
Ube3cQ80U95 Ocel1-202ENSMUST00000110051 2179 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Ube3cQ80U95 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Ube3cQ80U95 Fam129c-208ENSMUST00000143662 2267 ntAPPRIS P1 TSL 5 BASIC20.47■□□□□ 0.87
Ube3cQ80U95 Npb-202ENSMUST00000106194 530 ntAPPRIS ALT2 TSL 2 BASIC20.47■□□□□ 0.87
Ube3cQ80U95 Npb-203ENSMUST00000106195 542 ntAPPRIS P3 TSL 1 (best) BASIC20.47■□□□□ 0.87
Ube3cQ80U95 0610010K14Rik-207ENSMUST00000108577 659 ntTSL 5 BASIC20.47■□□□□ 0.87
Ube3cQ80U95 Mdfi-203ENSMUST00000113280 1281 ntTSL 5 BASIC20.47■□□□□ 0.87
Ube3cQ80U95 Cul4a-202ENSMUST00000121426 1044 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Ube3cQ80U95 Gtf3a-204ENSMUST00000146511 1298 ntAPPRIS P5 TSL 1 (best) BASIC20.47■□□□□ 0.87
Ube3cQ80U95 Gm21362-201ENSMUST00000194272 928 ntBASIC20.47■□□□□ 0.87
Ube3cQ80U95 Coq7-201ENSMUST00000032887 914 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Ube3cQ80U95 Prss27-201ENSMUST00000059482 1253 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Retrieved 100 of 76,532 protein–RNA pairs in 28.8 ms