Protein–RNA interactions for Protein: Q80TE0

Rpap1, RNA polymerase II-associated protein 1, mousemouse

Predictions only

Length 1,409 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpap1Q80TE0 Dhodh-209ENSMUST00000143900 1455 ntTSL 5 BASIC26.94■■□□□ 1.9
Rpap1Q80TE0 Ndufaf3-201ENSMUST00000074208 1487 ntAPPRIS P1 TSL 1 (best) BASIC26.94■■□□□ 1.9
Rpap1Q80TE0 2810408A11Rik-203ENSMUST00000102580 1640 ntAPPRIS P3 TSL 1 (best) BASIC26.94■■□□□ 1.9
Rpap1Q80TE0 Fgf17-201ENSMUST00000022697 1689 ntAPPRIS P1 TSL 1 (best) BASIC26.94■■□□□ 1.9
Rpap1Q80TE0 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC26.93■■□□□ 1.9
Rpap1Q80TE0 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC26.93■■□□□ 1.9
Rpap1Q80TE0 Tma7-201ENSMUST00000167504 944 ntAPPRIS P1 TSL 1 (best) BASIC26.93■■□□□ 1.9
Rpap1Q80TE0 Cebpzos-201ENSMUST00000063817 753 ntAPPRIS P1 TSL 2 BASIC26.93■■□□□ 1.9
Rpap1Q80TE0 Eif4g3-201ENSMUST00000058133 2663 ntTSL 1 (best) BASIC26.93■■□□□ 1.9
Rpap1Q80TE0 Zkscan4-202ENSMUST00000225845 1506 ntBASIC26.93■■□□□ 1.9
Rpap1Q80TE0 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC26.93■■□□□ 1.9
Rpap1Q80TE0 Cldn4-201ENSMUST00000051401 1816 ntAPPRIS P1 BASIC26.93■■□□□ 1.9
Rpap1Q80TE0 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC26.93■■□□□ 1.9
Rpap1Q80TE0 Aurkb-201ENSMUST00000021277 1950 ntAPPRIS P1 TSL 1 (best) BASIC26.93■■□□□ 1.9
Rpap1Q80TE0 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC26.93■■□□□ 1.9
Rpap1Q80TE0 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC26.93■■□□□ 1.9
Rpap1Q80TE0 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC26.93■■□□□ 1.9
Rpap1Q80TE0 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC26.93■■□□□ 1.9
Rpap1Q80TE0 Tnnt2-205ENSMUST00000178204 1172 ntAPPRIS ALT2 TSL 5 BASIC26.92■■□□□ 1.9
Rpap1Q80TE0 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC26.92■■□□□ 1.9
Rpap1Q80TE0 Gm21887-202ENSMUST00000179760 483 ntAPPRIS ALT2 TSL 5 BASIC26.92■■□□□ 1.9
Rpap1Q80TE0 Tnnt2-207ENSMUST00000179863 1097 ntAPPRIS P4 TSL 5 BASIC26.92■■□□□ 1.9
Rpap1Q80TE0 Anks1b-208ENSMUST00000182053 1649 ntTSL 5 BASIC26.92■■□□□ 1.9
Rpap1Q80TE0 Tnnt2-209ENSMUST00000188028 1200 ntAPPRIS P4 TSL 5 BASIC26.92■■□□□ 1.9
Rpap1Q80TE0 Ino80dos-204ENSMUST00000188602 678 ntTSL 2 BASIC26.92■■□□□ 1.9
Rpap1Q80TE0 Ogfod2-207ENSMUST00000196627 532 ntTSL 3 BASIC26.92■■□□□ 1.9
Rpap1Q80TE0 Gm43077-201ENSMUST00000200602 491 ntTSL 3 BASIC26.92■■□□□ 1.9
Rpap1Q80TE0 6330411D24Rik-201ENSMUST00000211105 1568 ntTSL 1 (best) BASIC26.92■■□□□ 1.9
Rpap1Q80TE0 Fxr2-201ENSMUST00000018909 2951 ntAPPRIS P1 TSL 1 (best) BASIC26.92■■□□□ 1.9
Rpap1Q80TE0 Ccnd3-202ENSMUST00000171031 2113 ntAPPRIS P1 TSL 5 BASIC26.92■■□□□ 1.9
Rpap1Q80TE0 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC26.92■■□□□ 1.9
Rpap1Q80TE0 Gtf2h4-201ENSMUST00000001565 1679 ntAPPRIS P1 TSL 1 (best) BASIC26.92■■□□□ 1.9
Rpap1Q80TE0 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC26.92■■□□□ 1.9
Rpap1Q80TE0 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC26.91■■□□□ 1.9
Rpap1Q80TE0 AC153889.1-201ENSMUST00000219257 330 ntBASIC26.91■■□□□ 1.9
Rpap1Q80TE0 Hist1h2ai-201ENSMUST00000070124 393 ntAPPRIS P1 BASIC26.91■■□□□ 1.9
Rpap1Q80TE0 Hist1h2an-201ENSMUST00000091751 393 ntAPPRIS P1 BASIC26.91■■□□□ 1.9
Rpap1Q80TE0 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC26.91■■□□□ 1.9
Rpap1Q80TE0 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC26.91■■□□□ 1.9
Rpap1Q80TE0 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC26.91■■□□□ 1.9
Rpap1Q80TE0 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC26.9■■□□□ 1.9
Rpap1Q80TE0 Pqlc1-208ENSMUST00000144468 1050 ntTSL 1 (best) BASIC26.9■■□□□ 1.9
Rpap1Q80TE0 Gm15889-201ENSMUST00000159142 1083 ntTSL 3 BASIC26.9■■□□□ 1.9
Rpap1Q80TE0 Gm27000-201ENSMUST00000182943 842 ntBASIC26.9■■□□□ 1.9
Rpap1Q80TE0 Olfr572-203ENSMUST00000215782 1233 ntAPPRIS P1 TSL 5 BASIC26.9■■□□□ 1.9
Rpap1Q80TE0 Hist1h2ad-201ENSMUST00000090776 572 ntAPPRIS P1 BASIC26.9■■□□□ 1.9
Rpap1Q80TE0 Trim45-202ENSMUST00000094048 1815 ntTSL 5 BASIC26.9■■□□□ 1.9
Rpap1Q80TE0 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC26.9■■□□□ 1.9
Rpap1Q80TE0 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC26.9■■□□□ 1.9
Rpap1Q80TE0 Gm26627-201ENSMUST00000181540 1487 ntTSL 1 (best) BASIC26.9■■□□□ 1.9
Rpap1Q80TE0 Rfesd-203ENSMUST00000179078 1436 ntAPPRIS P1 TSL 1 (best) BASIC26.9■■□□□ 1.9
Rpap1Q80TE0 Prpsap1-201ENSMUST00000106391 1841 ntAPPRIS P1 TSL 1 (best) BASIC26.9■■□□□ 1.9
Rpap1Q80TE0 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC26.9■■□□□ 1.9
Rpap1Q80TE0 Nfs1-202ENSMUST00000109600 709 ntTSL 1 (best) BASIC26.9■■□□□ 1.9
Rpap1Q80TE0 2310009B15Rik-201ENSMUST00000112025 565 ntAPPRIS P1 TSL 2 BASIC26.9■■□□□ 1.9
Rpap1Q80TE0 Naa10-204ENSMUST00000114389 1031 ntAPPRIS ALT2 TSL 1 (best) BASIC26.9■■□□□ 1.9
Rpap1Q80TE0 Hnrnpa1l2-ps-201ENSMUST00000129154 964 ntBASIC26.9■■□□□ 1.9
Rpap1Q80TE0 Tmem255b-201ENSMUST00000167071 1138 ntTSL 1 (best) BASIC26.9■■□□□ 1.9
Rpap1Q80TE0 Serinc2-201ENSMUST00000105996 1878 ntAPPRIS P3 TSL 1 (best) BASIC26.89■■□□□ 1.9
Rpap1Q80TE0 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC26.89■■□□□ 1.9
Rpap1Q80TE0 Anp32e-201ENSMUST00000015893 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC26.89■■□□□ 1.9
Rpap1Q80TE0 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC26.89■■□□□ 1.9
Rpap1Q80TE0 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC26.89■■□□□ 1.9
Rpap1Q80TE0 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC26.89■■□□□ 1.89
Rpap1Q80TE0 Gmnn-202ENSMUST00000110382 963 ntAPPRIS P1 TSL 1 (best) BASIC26.89■■□□□ 1.89
Rpap1Q80TE0 Taco1os-201ENSMUST00000140736 644 ntTSL 1 (best) BASIC26.89■■□□□ 1.89
Rpap1Q80TE0 Npw-202ENSMUST00000213213 531 ntAPPRIS P2 TSL 1 (best) BASIC26.89■■□□□ 1.89
Rpap1Q80TE0 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC26.88■■□□□ 1.89
Rpap1Q80TE0 Erich2-201ENSMUST00000100041 1749 ntAPPRIS P2 TSL 1 (best) BASIC26.88■■□□□ 1.89
Rpap1Q80TE0 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC26.88■■□□□ 1.89
Rpap1Q80TE0 Spout1-201ENSMUST00000100220 1805 ntAPPRIS P1 TSL 1 (best) BASIC26.88■■□□□ 1.89
Rpap1Q80TE0 H2-T-ps-201ENSMUST00000172538 1067 ntBASIC26.88■■□□□ 1.89
Rpap1Q80TE0 Cyhr1-204ENSMUST00000177359 1110 ntTSL 1 (best) BASIC26.88■■□□□ 1.89
Rpap1Q80TE0 Mrpl36-202ENSMUST00000221730 717 ntAPPRIS P1 TSL 3 BASIC26.88■■□□□ 1.89
Rpap1Q80TE0 Serf2-201ENSMUST00000099475 525 ntTSL 2 BASIC26.88■■□□□ 1.89
Rpap1Q80TE0 Lman2l-202ENSMUST00000115011 2290 ntTSL 5 BASIC26.87■■□□□ 1.89
Rpap1Q80TE0 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC26.87■■□□□ 1.89
Rpap1Q80TE0 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC26.87■■□□□ 1.89
Rpap1Q80TE0 Arfip1-202ENSMUST00000107687 1714 ntTSL 5 BASIC26.87■■□□□ 1.89
Rpap1Q80TE0 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC26.87■■□□□ 1.89
Rpap1Q80TE0 Oraov1-203ENSMUST00000105895 1016 ntAPPRIS ALT2 TSL 2 BASIC26.87■■□□□ 1.89
Rpap1Q80TE0 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC26.87■■□□□ 1.89
Rpap1Q80TE0 Syne4-208ENSMUST00000176304 1006 ntAPPRIS ALT2 TSL 5 BASIC26.87■■□□□ 1.89
Rpap1Q80TE0 Ssr2-205ENSMUST00000193934 569 ntTSL 3 BASIC26.87■■□□□ 1.89
Rpap1Q80TE0 4930458A03Rik-201ENSMUST00000198197 961 ntTSL 1 (best) BASIC26.87■■□□□ 1.89
Rpap1Q80TE0 Cenpp-201ENSMUST00000021818 1144 ntAPPRIS P1 TSL 1 (best) BASIC26.87■■□□□ 1.89
Rpap1Q80TE0 Tmem205-201ENSMUST00000046831 785 ntAPPRIS P1 TSL 1 (best) BASIC26.87■■□□□ 1.89
Rpap1Q80TE0 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC26.87■■□□□ 1.89
Rpap1Q80TE0 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC26.86■■□□□ 1.89
Rpap1Q80TE0 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC26.86■■□□□ 1.89
Rpap1Q80TE0 Gm5112-201ENSMUST00000204407 2368 ntBASIC26.86■■□□□ 1.89
Rpap1Q80TE0 Gm11452-201ENSMUST00000122376 690 ntBASIC26.86■■□□□ 1.89
Rpap1Q80TE0 Sdhaf4-201ENSMUST00000027338 683 ntAPPRIS P1 TSL 1 (best) BASIC26.86■■□□□ 1.89
Rpap1Q80TE0 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC26.86■■□□□ 1.89
Rpap1Q80TE0 Ddhd2-206ENSMUST00000211688 2265 ntTSL 1 (best) BASIC26.85■■□□□ 1.89
Rpap1Q80TE0 Tsc22d1-201ENSMUST00000022587 1762 ntAPPRIS P1 TSL 1 (best) BASIC26.85■■□□□ 1.89
Rpap1Q80TE0 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC26.85■■□□□ 1.89
Rpap1Q80TE0 Gm13186-201ENSMUST00000118031 316 ntBASIC26.85■■□□□ 1.89
Rpap1Q80TE0 Mras-202ENSMUST00000119472 1190 ntAPPRIS P1 TSL 1 (best) BASIC26.85■■□□□ 1.89
Rpap1Q80TE0 Fbxo6-208ENSMUST00000168503 1240 ntAPPRIS P1 TSL 2 BASIC26.85■■□□□ 1.89
Retrieved 100 of 76,532 protein–RNA pairs in 15.7 ms