Protein–RNA interactions for Protein: Q80SY5

Prpf38b, Pre-mRNA-splicing factor 38B, mousemouse

Known RBP Predictions only

Length 542 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf38bQ80SY5 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Prpf38bQ80SY5 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Prpf38bQ80SY5 Arntl-203ENSMUST00000210074 2554 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Prpf38bQ80SY5 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Prpf38bQ80SY5 Cdca7l-201ENSMUST00000021592 2957 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Prpf38bQ80SY5 Gm17112-201ENSMUST00000163194 432 ntTSL 3 BASIC18.11■□□□□ 0.49
Prpf38bQ80SY5 Gm22697-201ENSMUST00000175194 63 ntBASIC18.11■□□□□ 0.49
Prpf38bQ80SY5 Ndufa12-201ENSMUST00000020209 1110 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Prpf38bQ80SY5 Gm42545-201ENSMUST00000202755 922 ntBASIC18.11■□□□□ 0.49
Prpf38bQ80SY5 Calm2-201ENSMUST00000040440 1205 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Prpf38bQ80SY5 Syngr1-202ENSMUST00000009728 819 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Prpf38bQ80SY5 Nsfl1c-201ENSMUST00000028949 1364 ntAPPRIS ALT1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Prpf38bQ80SY5 Zfp689-202ENSMUST00000106299 1417 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Prpf38bQ80SY5 Mmp23-201ENSMUST00000030937 1434 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Prpf38bQ80SY5 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC18.11■□□□□ 0.49
Prpf38bQ80SY5 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Prpf38bQ80SY5 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Prpf38bQ80SY5 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Prpf38bQ80SY5 Gfra3-201ENSMUST00000025224 1992 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Prpf38bQ80SY5 Gm15853-202ENSMUST00000195518 2041 ntBASIC18.11■□□□□ 0.49
Prpf38bQ80SY5 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC18.11■□□□□ 0.49
Prpf38bQ80SY5 Gm5421-201ENSMUST00000181698 2354 ntBASIC18.11■□□□□ 0.49
Prpf38bQ80SY5 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
Prpf38bQ80SY5 Ube2d3-202ENSMUST00000166033 2504 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Prpf38bQ80SY5 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC18.11■□□□□ 0.49
Prpf38bQ80SY5 Ppp2r5d-201ENSMUST00000002839 2926 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Prpf38bQ80SY5 Eif4enif1-203ENSMUST00000110049 3614 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Prpf38bQ80SY5 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
Prpf38bQ80SY5 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Prpf38bQ80SY5 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC18.1■□□□□ 0.49
Prpf38bQ80SY5 Tcp1-201ENSMUST00000089024 1902 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Prpf38bQ80SY5 Dpf1-203ENSMUST00000108230 1553 ntTSL 5 BASIC18.1■□□□□ 0.49
Prpf38bQ80SY5 Acp4-203ENSMUST00000118216 1454 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
Prpf38bQ80SY5 Snrnp48-202ENSMUST00000178564 847 ntTSL 5 BASIC18.1■□□□□ 0.49
Prpf38bQ80SY5 Gm27704-201ENSMUST00000185094 107 ntBASIC18.1■□□□□ 0.49
Prpf38bQ80SY5 Uqcr11-201ENSMUST00000020372 445 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Prpf38bQ80SY5 Gm18669-201ENSMUST00000216049 778 ntBASIC18.1■□□□□ 0.49
Prpf38bQ80SY5 Efcab11-207ENSMUST00000223114 1122 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
Prpf38bQ80SY5 Zfp783-201ENSMUST00000095946 670 ntBASIC18.1■□□□□ 0.49
Prpf38bQ80SY5 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
Prpf38bQ80SY5 Ptp4a2-201ENSMUST00000030578 3646 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
Prpf38bQ80SY5 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Prpf38bQ80SY5 Slc22a3-201ENSMUST00000024595 3501 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Prpf38bQ80SY5 Msi2-201ENSMUST00000092794 1855 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Prpf38bQ80SY5 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Prpf38bQ80SY5 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC18.09■□□□□ 0.49
Prpf38bQ80SY5 9530080O11Rik-201ENSMUST00000137239 1475 ntTSL 2 BASIC18.09■□□□□ 0.49
Prpf38bQ80SY5 0610012G03Rik-201ENSMUST00000202722 1445 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
Prpf38bQ80SY5 Plpbp-202ENSMUST00000098851 1368 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Prpf38bQ80SY5 Gm18958-201ENSMUST00000174258 762 ntBASIC18.09■□□□□ 0.49
Prpf38bQ80SY5 Gm21887-202ENSMUST00000179760 483 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
Prpf38bQ80SY5 4930544I03Rik-201ENSMUST00000181184 1276 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Prpf38bQ80SY5 Gm2274-201ENSMUST00000184539 609 ntBASIC18.09■□□□□ 0.49
Prpf38bQ80SY5 Gm17807-201ENSMUST00000186869 298 ntBASIC18.09■□□□□ 0.49
Prpf38bQ80SY5 4930554G22Rik-201ENSMUST00000196102 686 ntBASIC18.09■□□□□ 0.49
Prpf38bQ80SY5 Gm42882-201ENSMUST00000201788 506 ntTSL 3 BASIC18.09■□□□□ 0.49
Prpf38bQ80SY5 Il17a-201ENSMUST00000027061 1171 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Prpf38bQ80SY5 Fkbp11-201ENSMUST00000003445 731 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Prpf38bQ80SY5 Rpl39l-201ENSMUST00000044103 805 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Prpf38bQ80SY5 Pih1d1-201ENSMUST00000085375 1185 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Prpf38bQ80SY5 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Prpf38bQ80SY5 A530084C06Rik-201ENSMUST00000170573 3200 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
Prpf38bQ80SY5 6030445D17Rik-201ENSMUST00000084593 1728 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
Prpf38bQ80SY5 Rsu1-201ENSMUST00000028059 1546 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Prpf38bQ80SY5 Gm8309-201ENSMUST00000206627 1448 ntBASIC18.08■□□□□ 0.49
Prpf38bQ80SY5 Mfsd10-201ENSMUST00000001109 1907 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Prpf38bQ80SY5 Dvl2-201ENSMUST00000019362 2968 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Prpf38bQ80SY5 Mcl1-201ENSMUST00000037947 3418 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.48
Prpf38bQ80SY5 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.48
Prpf38bQ80SY5 Zkscan8-202ENSMUST00000110481 728 ntTSL 2 BASIC18.08■□□□□ 0.48
Prpf38bQ80SY5 AA467197-202ENSMUST00000110512 751 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Prpf38bQ80SY5 Gm17349-201ENSMUST00000163472 300 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.48
Prpf38bQ80SY5 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Prpf38bQ80SY5 Cdkn2c-201ENSMUST00000063531 1106 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Prpf38bQ80SY5 Matn4-202ENSMUST00000103104 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Prpf38bQ80SY5 Pex5-202ENSMUST00000080557 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Prpf38bQ80SY5 Gbx1-201ENSMUST00000088311 3475 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Prpf38bQ80SY5 Fam213a-202ENSMUST00000118466 1567 ntAPPRIS ALT1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Prpf38bQ80SY5 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Prpf38bQ80SY5 Fam171a2-201ENSMUST00000049057 3118 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Prpf38bQ80SY5 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Prpf38bQ80SY5 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Prpf38bQ80SY5 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC18.07■□□□□ 0.48
Prpf38bQ80SY5 Irak1-201ENSMUST00000033769 2890 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Prpf38bQ80SY5 Vsig10l-204ENSMUST00000203769 2473 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Prpf38bQ80SY5 1700022H01Rik-201ENSMUST00000219142 387 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Prpf38bQ80SY5 D830030K20Rik-204ENSMUST00000225885 1142 ntBASIC18.07■□□□□ 0.48
Prpf38bQ80SY5 Guca1a-201ENSMUST00000059348 871 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Prpf38bQ80SY5 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Prpf38bQ80SY5 Pacsin1-203ENSMUST00000114872 1647 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Prpf38bQ80SY5 Ostm1-201ENSMUST00000040718 3006 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Prpf38bQ80SY5 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Prpf38bQ80SY5 AC154231.1-201ENSMUST00000220564 2175 ntBASIC18.07■□□□□ 0.48
Prpf38bQ80SY5 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Prpf38bQ80SY5 Gm45560-201ENSMUST00000211492 1472 ntBASIC18.07■□□□□ 0.48
Prpf38bQ80SY5 Anp32a-201ENSMUST00000085519 2113 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Prpf38bQ80SY5 Tsc22d1-201ENSMUST00000022587 1762 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Prpf38bQ80SY5 Crebzf-201ENSMUST00000061767 3376 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
Prpf38bQ80SY5 Ndufv1-202ENSMUST00000128787 1436 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
Prpf38bQ80SY5 Ndufv1-207ENSMUST00000134479 1438 ntTSL 5 BASIC18.06■□□□□ 0.48
Retrieved 100 of 76,532 protein–RNA pairs in 43.1 ms