Protein–RNA interactions for Protein: Q80SX8

Pif1, ATP-dependent DNA helicase PIF1, mousemouse

Predictions only

Length 650 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pif1Q80SX8 Mdfi-203ENSMUST00000113280 1281 ntTSL 5 BASIC16.01■□□□□ 0.15
Pif1Q80SX8 Pdcd5-202ENSMUST00000120714 767 ntTSL 3 BASIC16.01■□□□□ 0.15
Pif1Q80SX8 Snx15-207ENSMUST00000154601 767 ntTSL 5 BASIC16.01■□□□□ 0.15
Pif1Q80SX8 Gm24841-201ENSMUST00000158676 357 ntBASIC16.01■□□□□ 0.15
Pif1Q80SX8 Hist1h2bm-201ENSMUST00000224651 524 ntAPPRIS P1 BASIC16.01■□□□□ 0.15
Pif1Q80SX8 Tmco4-202ENSMUST00000050949 3318 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Pif1Q80SX8 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
Pif1Q80SX8 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Pif1Q80SX8 Klhl5-204ENSMUST00000204097 3149 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Pif1Q80SX8 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC16.01■□□□□ 0.15
Pif1Q80SX8 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Pif1Q80SX8 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Pif1Q80SX8 Tgds-204ENSMUST00000228543 1594 ntBASIC16■□□□□ 0.15
Pif1Q80SX8 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC16■□□□□ 0.15
Pif1Q80SX8 Pdia6-201ENSMUST00000057288 2175 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Pif1Q80SX8 Nit1-202ENSMUST00000111295 1335 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
Pif1Q80SX8 Mpdu1-201ENSMUST00000018905 1321 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Pif1Q80SX8 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC16■□□□□ 0.15
Pif1Q80SX8 Nlrp5-ps-201ENSMUST00000044683 1913 ntTSL 2 BASIC16■□□□□ 0.15
Pif1Q80SX8 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Pif1Q80SX8 Gm13474-201ENSMUST00000122466 815 ntBASIC16■□□□□ 0.15
Pif1Q80SX8 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC16■□□□□ 0.15
Pif1Q80SX8 Gm27741-201ENSMUST00000185060 237 ntBASIC16■□□□□ 0.15
Pif1Q80SX8 Gm29019-202ENSMUST00000188623 564 ntTSL 2 BASIC16■□□□□ 0.15
Pif1Q80SX8 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC16■□□□□ 0.15
Pif1Q80SX8 Gm7791-201ENSMUST00000219066 539 ntBASIC16■□□□□ 0.15
Pif1Q80SX8 Rgcc-201ENSMUST00000022595 918 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Pif1Q80SX8 Lsm10-201ENSMUST00000055575 943 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Pif1Q80SX8 Nkx2-6-201ENSMUST00000062437 1134 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Pif1Q80SX8 Rplp2-201ENSMUST00000084434 964 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Pif1Q80SX8 Cdv3-201ENSMUST00000035484 3387 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
Pif1Q80SX8 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Pif1Q80SX8 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Pif1Q80SX8 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Pif1Q80SX8 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
Pif1Q80SX8 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Pif1Q80SX8 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC16■□□□□ 0.15
Pif1Q80SX8 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC16■□□□□ 0.15
Pif1Q80SX8 Fxr2-201ENSMUST00000018909 2951 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Pif1Q80SX8 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC15.99■□□□□ 0.15
Pif1Q80SX8 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC15.99■□□□□ 0.15
Pif1Q80SX8 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Pif1Q80SX8 Arhgap35-201ENSMUST00000075845 9147 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Pif1Q80SX8 Lgmn-201ENSMUST00000021607 1990 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Pif1Q80SX8 Pigu-201ENSMUST00000077626 1636 ntAPPRIS P2 TSL 1 (best) BASIC15.99■□□□□ 0.15
Pif1Q80SX8 Gm15545-202ENSMUST00000141011 899 ntTSL 3 BASIC15.99■□□□□ 0.15
Pif1Q80SX8 Gm12781-201ENSMUST00000146269 395 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Pif1Q80SX8 Tppp3-202ENSMUST00000176419 719 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Pif1Q80SX8 Coq7-201ENSMUST00000032887 914 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Pif1Q80SX8 Prss40-201ENSMUST00000047840 1275 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Pif1Q80SX8 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Pif1Q80SX8 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Pif1Q80SX8 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Pif1Q80SX8 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC15.99■□□□□ 0.15
Pif1Q80SX8 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Pif1Q80SX8 Fam149b-216ENSMUST00000225942 2151 ntAPPRIS ALT2 BASIC15.99■□□□□ 0.15
Pif1Q80SX8 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Pif1Q80SX8 1810043G02Rik-201ENSMUST00000105397 1818 ntAPPRIS P2 TSL 1 (best) BASIC15.98■□□□□ 0.15
Pif1Q80SX8 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC15.98■□□□□ 0.15
Pif1Q80SX8 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
Pif1Q80SX8 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Pif1Q80SX8 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
Pif1Q80SX8 Adra2a-201ENSMUST00000036700 3801 ntAPPRIS P1 BASIC15.98■□□□□ 0.15
Pif1Q80SX8 Nagk-203ENSMUST00000113851 1323 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Pif1Q80SX8 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Pif1Q80SX8 Tmem131-201ENSMUST00000027290 6546 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Pif1Q80SX8 Neurl1b-201ENSMUST00000053020 6195 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Pif1Q80SX8 Mfhas1-201ENSMUST00000037666 6408 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Pif1Q80SX8 Gm13401-201ENSMUST00000117074 291 ntBASIC15.98■□□□□ 0.15
Pif1Q80SX8 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Pif1Q80SX8 Prr3-209ENSMUST00000174849 581 ntTSL 2 BASIC15.98■□□□□ 0.15
Pif1Q80SX8 Mgst3-201ENSMUST00000028005 1097 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Pif1Q80SX8 Prss12-201ENSMUST00000029603 2602 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Pif1Q80SX8 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Pif1Q80SX8 Ppm1a-201ENSMUST00000021514 7668 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Pif1Q80SX8 Bend4-204ENSMUST00000201972 8268 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
Pif1Q80SX8 Tle3-211ENSMUST00000161689 2836 ntTSL 2 BASIC15.98■□□□□ 0.15
Pif1Q80SX8 Nptn-212ENSMUST00000177292 1390 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
Pif1Q80SX8 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Pif1Q80SX8 Abhd13-201ENSMUST00000048216 5074 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Pif1Q80SX8 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Pif1Q80SX8 Npepl1-201ENSMUST00000044415 2467 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Pif1Q80SX8 Ptges3l-202ENSMUST00000103102 1463 ntAPPRIS P2 TSL 1 (best) BASIC15.97■□□□□ 0.15
Pif1Q80SX8 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Pif1Q80SX8 Tacc3-203ENSMUST00000114426 2187 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
Pif1Q80SX8 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
Pif1Q80SX8 Cklf-208ENSMUST00000212433 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
Pif1Q80SX8 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Pif1Q80SX8 Mtmr14-201ENSMUST00000113146 2676 ntAPPRIS P2 TSL 1 (best) BASIC15.97■□□□□ 0.15
Pif1Q80SX8 Dach1-202ENSMUST00000071533 5219 ntAPPRIS P4 TSL 1 (best) BASIC15.97■□□□□ 0.15
Pif1Q80SX8 Pcf11-201ENSMUST00000119954 5995 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Pif1Q80SX8 H2-Q6-201ENSMUST00000113879 981 ntAPPRIS P1 TSL 2 BASIC15.97■□□□□ 0.15
Pif1Q80SX8 Steap1-201ENSMUST00000015796 1230 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Pif1Q80SX8 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Pif1Q80SX8 Il17a-201ENSMUST00000027061 1171 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Pif1Q80SX8 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC15.97■□□□□ 0.15
Pif1Q80SX8 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Pif1Q80SX8 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC15.97■□□□□ 0.15
Pif1Q80SX8 Gm6093-201ENSMUST00000221792 1623 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Pif1Q80SX8 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC15.97■□□□□ 0.15
Retrieved 100 of 76,532 protein–RNA pairs in 24 ms