Protein–RNA interactions for Protein: Q6QIY3

Scn10a, Sodium channel protein type 10 subunit alpha, mousemouse

Predictions only

Length 1,958 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn10aQ6QIY3 Cd300c-201ENSMUST00000061637 690 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
Scn10aQ6QIY3 Cd300c-202ENSMUST00000092466 700 ntAPPRIS P5 TSL 5 BASIC19.73■□□□□ 0.75
Scn10aQ6QIY3 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Scn10aQ6QIY3 Dap-201ENSMUST00000044524 1555 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Scn10aQ6QIY3 Gm37280-201ENSMUST00000194583 375 ntTSL 3 BASIC19.72■□□□□ 0.75
Scn10aQ6QIY3 Gm19935-201ENSMUST00000209208 979 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Scn10aQ6QIY3 Timm13-204ENSMUST00000219896 542 ntTSL 3 BASIC19.72■□□□□ 0.75
Scn10aQ6QIY3 Rhoc-201ENSMUST00000002303 1202 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Scn10aQ6QIY3 Hist1h1a-201ENSMUST00000055770 741 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
Scn10aQ6QIY3 Platr31-201ENSMUST00000180653 1466 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Scn10aQ6QIY3 Arpc5-201ENSMUST00000077755 1914 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Scn10aQ6QIY3 Serinc2-201ENSMUST00000105996 1878 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
Scn10aQ6QIY3 Gm26892-201ENSMUST00000181695 1636 ntTSL 5 BASIC19.72■□□□□ 0.75
Scn10aQ6QIY3 Tubb6-201ENSMUST00000001513 1757 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Scn10aQ6QIY3 Dtx3-202ENSMUST00000116229 1994 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Scn10aQ6QIY3 Gm11452-201ENSMUST00000122376 690 ntBASIC19.72■□□□□ 0.75
Scn10aQ6QIY3 Gm44450-201ENSMUST00000199528 114 ntBASIC19.72■□□□□ 0.75
Scn10aQ6QIY3 Gm9449-201ENSMUST00000207265 1011 ntBASIC19.72■□□□□ 0.75
Scn10aQ6QIY3 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Scn10aQ6QIY3 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
Scn10aQ6QIY3 B3gnt4-201ENSMUST00000031384 1423 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
Scn10aQ6QIY3 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Scn10aQ6QIY3 4933405L10Rik-201ENSMUST00000013302 1214 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Scn10aQ6QIY3 Gm13054-201ENSMUST00000154192 820 ntTSL 3 BASIC19.71■□□□□ 0.75
Scn10aQ6QIY3 Gm20675-201ENSMUST00000175861 338 ntTSL 3 BASIC19.71■□□□□ 0.75
Scn10aQ6QIY3 Gm26549-201ENSMUST00000181112 1209 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Scn10aQ6QIY3 Gm33054-201ENSMUST00000216588 313 ntTSL 5 BASIC19.71■□□□□ 0.75
Scn10aQ6QIY3 Cmtm3-201ENSMUST00000034343 1616 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Scn10aQ6QIY3 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Scn10aQ6QIY3 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Scn10aQ6QIY3 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Scn10aQ6QIY3 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Scn10aQ6QIY3 Prpsap1-201ENSMUST00000106391 1841 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Scn10aQ6QIY3 Gm12644-201ENSMUST00000119935 606 ntBASIC19.7■□□□□ 0.74
Scn10aQ6QIY3 Tsen15-201ENSMUST00000015124 1133 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Scn10aQ6QIY3 Inip-202ENSMUST00000107526 1438 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Scn10aQ6QIY3 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Scn10aQ6QIY3 Gal3st1-201ENSMUST00000063004 1879 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Scn10aQ6QIY3 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Scn10aQ6QIY3 March3-202ENSMUST00000102912 1754 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Scn10aQ6QIY3 Cyp26b1-203ENSMUST00000204109 1340 ntTSL 5 BASIC19.7■□□□□ 0.74
Scn10aQ6QIY3 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Scn10aQ6QIY3 Dnajc24-201ENSMUST00000102555 1197 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Scn10aQ6QIY3 Trmt112-ps2-201ENSMUST00000117987 378 ntBASIC19.7■□□□□ 0.74
Scn10aQ6QIY3 Gm18421-201ENSMUST00000204122 625 ntBASIC19.7■□□□□ 0.74
Scn10aQ6QIY3 Pisd-201ENSMUST00000061895 2183 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
Scn10aQ6QIY3 Gm7935-201ENSMUST00000100555 1278 ntBASIC19.69■□□□□ 0.74
Scn10aQ6QIY3 Gm12973-201ENSMUST00000143967 607 ntTSL 5 BASIC19.69■□□□□ 0.74
Scn10aQ6QIY3 Psmb1-201ENSMUST00000014913 1036 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Scn10aQ6QIY3 Eapp-203ENSMUST00000160085 676 ntTSL 3 BASIC19.69■□□□□ 0.74
Scn10aQ6QIY3 1600014C10Rik-209ENSMUST00000179992 568 ntTSL 3 BASIC19.69■□□□□ 0.74
Scn10aQ6QIY3 Gm42802-201ENSMUST00000202475 456 ntTSL 2 BASIC19.69■□□□□ 0.74
Scn10aQ6QIY3 Gm18206-201ENSMUST00000207027 926 ntBASIC19.69■□□□□ 0.74
Scn10aQ6QIY3 Tenm3-204ENSMUST00000110346 2267 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Scn10aQ6QIY3 Gm6190-201ENSMUST00000220683 1374 ntBASIC19.69■□□□□ 0.74
Scn10aQ6QIY3 Txnl4b-201ENSMUST00000034159 1890 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Scn10aQ6QIY3 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Scn10aQ6QIY3 3110002H16Rik-201ENSMUST00000025276 2170 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Scn10aQ6QIY3 Shd-201ENSMUST00000044216 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Scn10aQ6QIY3 Vegfc-203ENSMUST00000210831 555 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Scn10aQ6QIY3 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Scn10aQ6QIY3 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Scn10aQ6QIY3 Kctd14-202ENSMUST00000121987 1210 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Scn10aQ6QIY3 Gm10052-201ENSMUST00000168019 960 ntBASIC19.68■□□□□ 0.74
Scn10aQ6QIY3 Gm29629-201ENSMUST00000187926 386 ntTSL 3 BASIC19.68■□□□□ 0.74
Scn10aQ6QIY3 Rpsa-ps1-201ENSMUST00000191040 886 ntBASIC19.68■□□□□ 0.74
Scn10aQ6QIY3 Ank1-201ENSMUST00000033947 1030 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Scn10aQ6QIY3 Gm7729-201ENSMUST00000050143 801 ntBASIC19.68■□□□□ 0.74
Scn10aQ6QIY3 Vps72-201ENSMUST00000009102 1456 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Scn10aQ6QIY3 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC19.68■□□□□ 0.74
Scn10aQ6QIY3 Anks1b-208ENSMUST00000182053 1649 ntTSL 5 BASIC19.67■□□□□ 0.74
Scn10aQ6QIY3 Hdhd2-202ENSMUST00000097521 1716 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Scn10aQ6QIY3 Mkln1os-202ENSMUST00000144232 964 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Scn10aQ6QIY3 AC153794.1-201ENSMUST00000169148 126 ntBASIC19.67■□□□□ 0.74
Scn10aQ6QIY3 Hs3st2-202ENSMUST00000206880 1149 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Scn10aQ6QIY3 AC132104.2-201ENSMUST00000215011 266 ntBASIC19.67■□□□□ 0.74
Scn10aQ6QIY3 Ift74-202ENSMUST00000107104 1713 ntTSL 2 BASIC19.67■□□□□ 0.74
Scn10aQ6QIY3 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Scn10aQ6QIY3 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC19.67■□□□□ 0.74
Scn10aQ6QIY3 Slc7a10-201ENSMUST00000001854 1953 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Scn10aQ6QIY3 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Scn10aQ6QIY3 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Scn10aQ6QIY3 Gm18195-201ENSMUST00000207604 706 ntBASIC19.66■□□□□ 0.74
Scn10aQ6QIY3 Sharpin-201ENSMUST00000023211 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Scn10aQ6QIY3 Fxr2-201ENSMUST00000018909 2951 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Scn10aQ6QIY3 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Scn10aQ6QIY3 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC19.66■□□□□ 0.74
Scn10aQ6QIY3 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Scn10aQ6QIY3 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Scn10aQ6QIY3 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Scn10aQ6QIY3 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC19.66■□□□□ 0.74
Scn10aQ6QIY3 Emd-201ENSMUST00000002029 1595 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Scn10aQ6QIY3 Pus1-204ENSMUST00000112426 1389 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Scn10aQ6QIY3 Ascl2-201ENSMUST00000009392 1605 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Scn10aQ6QIY3 Acads-201ENSMUST00000031524 1870 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Scn10aQ6QIY3 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Scn10aQ6QIY3 Sbsn-202ENSMUST00000182227 432 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
Scn10aQ6QIY3 Sbsn-203ENSMUST00000182229 732 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Scn10aQ6QIY3 Gm43073-201ENSMUST00000198200 1189 ntBASIC19.66■□□□□ 0.74
Scn10aQ6QIY3 Tssc4-208ENSMUST00000208779 647 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Retrieved 100 of 76,532 protein–RNA pairs in 23.3 ms