Protein–RNA interactions for Protein: Q6PAV2

Herc4, Probable E3 ubiquitin-protein ligase HERC4, mousemouse

Predictions only

Length 1,057 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Herc4Q6PAV2 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Herc4Q6PAV2 Mettl4-ps1-202ENSMUST00000130218 1323 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Herc4Q6PAV2 Ulk1-201ENSMUST00000031490 5213 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
Herc4Q6PAV2 Tmem125-201ENSMUST00000060214 1864 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
Herc4Q6PAV2 Adsl-204ENSMUST00000164806 1595 ntTSL 5 BASIC19.19■□□□□ 0.66
Herc4Q6PAV2 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC19.19■□□□□ 0.66
Herc4Q6PAV2 Fam181a-201ENSMUST00000179363 1406 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
Herc4Q6PAV2 Tmem131-208ENSMUST00000194563 6698 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
Herc4Q6PAV2 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC19.19■□□□□ 0.66
Herc4Q6PAV2 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Herc4Q6PAV2 Map7-205ENSMUST00000214231 675 ntTSL 3 BASIC19.19■□□□□ 0.66
Herc4Q6PAV2 Cebpg-201ENSMUST00000070191 914 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
Herc4Q6PAV2 Mfap2-201ENSMUST00000071977 1073 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Herc4Q6PAV2 Apba3-201ENSMUST00000057798 2106 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Herc4Q6PAV2 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Herc4Q6PAV2 Aldh5a1-201ENSMUST00000037615 5647 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Herc4Q6PAV2 Haus8-201ENSMUST00000035960 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Herc4Q6PAV2 Pcnx-204ENSMUST00000221721 8318 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
Herc4Q6PAV2 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Herc4Q6PAV2 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Herc4Q6PAV2 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Herc4Q6PAV2 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Herc4Q6PAV2 Lrrc47-201ENSMUST00000030894 3395 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Herc4Q6PAV2 Tmem198-201ENSMUST00000050899 2456 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Herc4Q6PAV2 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Herc4Q6PAV2 Fbxl15-201ENSMUST00000026256 1348 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Herc4Q6PAV2 Stk32c-202ENSMUST00000165870 1883 ntTSL 5 BASIC19.18■□□□□ 0.66
Herc4Q6PAV2 Pmepa1-201ENSMUST00000036248 4538 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Herc4Q6PAV2 Bub3-201ENSMUST00000084502 2218 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Herc4Q6PAV2 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC19.17■□□□□ 0.66
Herc4Q6PAV2 Zfp629-207ENSMUST00000134446 670 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Herc4Q6PAV2 Igflr1-202ENSMUST00000172251 1224 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Herc4Q6PAV2 E030044B06Rik-201ENSMUST00000181195 1266 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Herc4Q6PAV2 AC154649.1-201ENSMUST00000227392 384 ntBASIC19.17■□□□□ 0.66
Herc4Q6PAV2 Cfap20-201ENSMUST00000034249 1295 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Herc4Q6PAV2 Plpp1-202ENSMUST00000070951 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Herc4Q6PAV2 Pusl1-201ENSMUST00000097737 1243 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
Herc4Q6PAV2 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
Herc4Q6PAV2 Amigo1-202ENSMUST00000106656 5482 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Herc4Q6PAV2 Gm37519-201ENSMUST00000191687 2210 ntBASIC19.17■□□□□ 0.66
Herc4Q6PAV2 Naxd-201ENSMUST00000033901 1359 ntTSL 2 BASIC19.17■□□□□ 0.66
Herc4Q6PAV2 Clstn2-201ENSMUST00000035027 4365 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Herc4Q6PAV2 Ift74-201ENSMUST00000030311 2139 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
Herc4Q6PAV2 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Herc4Q6PAV2 Map3k5-201ENSMUST00000095806 5450 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Herc4Q6PAV2 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC19.16■□□□□ 0.66
Herc4Q6PAV2 Ndufb2-202ENSMUST00000119379 455 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Herc4Q6PAV2 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Herc4Q6PAV2 Gm9694-201ENSMUST00000193347 1189 ntBASIC19.16■□□□□ 0.66
Herc4Q6PAV2 AC153881.1-201ENSMUST00000214448 284 ntBASIC19.16■□□□□ 0.66
Herc4Q6PAV2 Ankib1-201ENSMUST00000043551 6426 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Herc4Q6PAV2 Man2a1-201ENSMUST00000086723 6991 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Herc4Q6PAV2 Gm45736-201ENSMUST00000210592 1352 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
Herc4Q6PAV2 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Herc4Q6PAV2 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Herc4Q6PAV2 Dcaf5-201ENSMUST00000054145 5706 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Herc4Q6PAV2 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC19.16■□□□□ 0.66
Herc4Q6PAV2 Abhd10-201ENSMUST00000066983 2848 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Herc4Q6PAV2 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Herc4Q6PAV2 Gm16863-201ENSMUST00000181476 2431 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Herc4Q6PAV2 Rev1-201ENSMUST00000027251 4262 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Herc4Q6PAV2 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Herc4Q6PAV2 Prdm6-201ENSMUST00000091900 2601 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Herc4Q6PAV2 Fbxo7-203ENSMUST00000120344 1655 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Herc4Q6PAV2 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Herc4Q6PAV2 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Herc4Q6PAV2 Ppm1b-202ENSMUST00000112304 3262 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
Herc4Q6PAV2 Camsap2-201ENSMUST00000048309 7823 ntAPPRIS P3 TSL 5 BASIC19.15■□□□□ 0.66
Herc4Q6PAV2 Rgs19-207ENSMUST00000108779 642 ntTSL 5 BASIC19.15■□□□□ 0.66
Herc4Q6PAV2 Prss16-204ENSMUST00000150547 1159 ntTSL 3 BASIC19.15■□□□□ 0.66
Herc4Q6PAV2 Smim22-201ENSMUST00000178155 429 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
Herc4Q6PAV2 Uqcr11-201ENSMUST00000020372 445 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Herc4Q6PAV2 Uchl1-201ENSMUST00000031131 1177 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Herc4Q6PAV2 Gnao1-207ENSMUST00000138659 5526 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Herc4Q6PAV2 Wbp1-202ENSMUST00000113936 1314 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Herc4Q6PAV2 Vac14-201ENSMUST00000034190 3069 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Herc4Q6PAV2 Ntng1-204ENSMUST00000106571 1446 ntTSL 5 BASIC19.15■□□□□ 0.66
Herc4Q6PAV2 Ntng1-210ENSMUST00000138953 1443 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Herc4Q6PAV2 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Herc4Q6PAV2 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Herc4Q6PAV2 Dhx32-203ENSMUST00000106139 2233 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Herc4Q6PAV2 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.66
Herc4Q6PAV2 Cerkl-205ENSMUST00000143974 1623 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Herc4Q6PAV2 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Herc4Q6PAV2 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
Herc4Q6PAV2 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Herc4Q6PAV2 Man2a2-201ENSMUST00000098346 6554 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Herc4Q6PAV2 Acadvl-201ENSMUST00000018718 2020 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
Herc4Q6PAV2 Il17rb-202ENSMUST00000122205 2094 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
Herc4Q6PAV2 Proser2-201ENSMUST00000054254 2061 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Herc4Q6PAV2 Atox1-201ENSMUST00000108857 541 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Herc4Q6PAV2 Zfp467-208ENSMUST00000114564 626 ntTSL 2 BASIC19.14■□□□□ 0.65
Herc4Q6PAV2 Mir1199-201ENSMUST00000117015 119 ntBASIC19.14■□□□□ 0.65
Herc4Q6PAV2 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC19.14■□□□□ 0.65
Herc4Q6PAV2 Gm37939-201ENSMUST00000192309 447 ntTSL 5 BASIC19.14■□□□□ 0.65
Herc4Q6PAV2 Gm10812-201ENSMUST00000099864 546 ntBASIC19.14■□□□□ 0.65
Herc4Q6PAV2 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Herc4Q6PAV2 Fam129c-208ENSMUST00000143662 2267 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
Herc4Q6PAV2 Gm42417-201ENSMUST00000191849 2256 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Herc4Q6PAV2 Rbbp7-202ENSMUST00000112326 1430 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 22.2 ms