Protein–RNA interactions for Protein: Q6P9Z1

Smarcd3, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 3, mousemouse

Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcd3Q6P9Z1 Fam126a-201ENSMUST00000030849 5659 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Smarcd3Q6P9Z1 Cacna1h-202ENSMUST00000159048 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
Smarcd3Q6P9Z1 Cyfip2-205ENSMUST00000165599 6659 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Smarcd3Q6P9Z1 Bub3-201ENSMUST00000084502 2218 ntAPPRIS P2 TSL 1 (best) BASIC15.95■□□□□ 0.14
Smarcd3Q6P9Z1 Dleu2-208ENSMUST00000182768 1442 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Smarcd3Q6P9Z1 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Smarcd3Q6P9Z1 Camk2n1-201ENSMUST00000050918 4444 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Smarcd3Q6P9Z1 Cask-201ENSMUST00000033321 4057 ntTSL 5 BASIC15.95■□□□□ 0.14
Smarcd3Q6P9Z1 Zfp467-201ENSMUST00000101443 599 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Smarcd3Q6P9Z1 Jtb-202ENSMUST00000119304 878 ntTSL 3 BASIC15.95■□□□□ 0.14
Smarcd3Q6P9Z1 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Smarcd3Q6P9Z1 Gm6916-201ENSMUST00000205277 828 ntTSL 3 BASIC15.95■□□□□ 0.14
Smarcd3Q6P9Z1 Slc35b2-207ENSMUST00000226086 850 ntBASIC15.95■□□□□ 0.14
Smarcd3Q6P9Z1 Hspe1-201ENSMUST00000075242 774 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Smarcd3Q6P9Z1 Iqsec1-202ENSMUST00000101153 8036 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
Smarcd3Q6P9Z1 Ttbk1-201ENSMUST00000047034 6959 ntAPPRIS P2 TSL 5 BASIC15.95■□□□□ 0.14
Smarcd3Q6P9Z1 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC15.95■□□□□ 0.14
Smarcd3Q6P9Z1 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Smarcd3Q6P9Z1 Lrrc47-205ENSMUST00000169622 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
Smarcd3Q6P9Z1 BC051019-202ENSMUST00000106735 1957 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Smarcd3Q6P9Z1 Podxl2-201ENSMUST00000038409 1994 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
Smarcd3Q6P9Z1 Prrt4-201ENSMUST00000159200 3411 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Smarcd3Q6P9Z1 Adgrl1-201ENSMUST00000045393 5643 ntAPPRIS P1 TSL 5 BASIC15.94■□□□□ 0.14
Smarcd3Q6P9Z1 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Smarcd3Q6P9Z1 Rab11fip4-201ENSMUST00000017783 7156 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Smarcd3Q6P9Z1 Tmem81-201ENSMUST00000058167 1742 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Smarcd3Q6P9Z1 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Smarcd3Q6P9Z1 Apba3-201ENSMUST00000057798 2106 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Smarcd3Q6P9Z1 Mag-201ENSMUST00000040548 2419 ntAPPRIS P2 TSL 1 (best) BASIC15.94■□□□□ 0.14
Smarcd3Q6P9Z1 Acvr2a-201ENSMUST00000063886 5686 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Smarcd3Q6P9Z1 Rimbp3-201ENSMUST00000169803 5787 ntAPPRIS P1 BASIC15.94■□□□□ 0.14
Smarcd3Q6P9Z1 Prcd-201ENSMUST00000106381 724 ntTSL 3 BASIC15.94■□□□□ 0.14
Smarcd3Q6P9Z1 Gm26571-201ENSMUST00000181399 666 ntBASIC15.94■□□□□ 0.14
Smarcd3Q6P9Z1 Lonp1-201ENSMUST00000047226 2963 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Smarcd3Q6P9Z1 Znrf1-201ENSMUST00000095176 3108 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Smarcd3Q6P9Z1 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Smarcd3Q6P9Z1 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC15.94■□□□□ 0.14
Smarcd3Q6P9Z1 Zdhhc16-201ENSMUST00000026154 1821 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Smarcd3Q6P9Z1 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Smarcd3Q6P9Z1 Cdc14b-203ENSMUST00000109770 3052 ntAPPRIS P3 TSL 1 (best) BASIC15.93■□□□□ 0.14
Smarcd3Q6P9Z1 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC15.93■□□□□ 0.14
Smarcd3Q6P9Z1 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Smarcd3Q6P9Z1 Thsd7a-202ENSMUST00000119581 5678 ntAPPRIS P2 TSL 5 BASIC15.93■□□□□ 0.14
Smarcd3Q6P9Z1 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Smarcd3Q6P9Z1 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC15.93■□□□□ 0.14
Smarcd3Q6P9Z1 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Smarcd3Q6P9Z1 AC108858.1-201ENSMUST00000228461 1498 ntBASIC15.93■□□□□ 0.14
Smarcd3Q6P9Z1 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Smarcd3Q6P9Z1 Arhgap42-201ENSMUST00000093893 6116 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Smarcd3Q6P9Z1 Cpox-201ENSMUST00000060077 3186 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Smarcd3Q6P9Z1 Gpat3-203ENSMUST00000112887 3059 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Smarcd3Q6P9Z1 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Smarcd3Q6P9Z1 Gm42569-201ENSMUST00000200539 472 ntBASIC15.93■□□□□ 0.14
Smarcd3Q6P9Z1 Gm29791-202ENSMUST00000207888 369 ntBASIC15.93■□□□□ 0.14
Smarcd3Q6P9Z1 AC153845.2-202ENSMUST00000213372 807 ntTSL 3 BASIC15.93■□□□□ 0.14
Smarcd3Q6P9Z1 Smn1-201ENSMUST00000022147 1222 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Smarcd3Q6P9Z1 Prrg2-201ENSMUST00000007981 1295 ntAPPRIS P2 TSL 1 (best) BASIC15.93■□□□□ 0.14
Smarcd3Q6P9Z1 Ttc32-201ENSMUST00000085741 1000 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Smarcd3Q6P9Z1 Zfp783-201ENSMUST00000095946 670 ntBASIC15.93■□□□□ 0.14
Smarcd3Q6P9Z1 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Smarcd3Q6P9Z1 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Smarcd3Q6P9Z1 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Smarcd3Q6P9Z1 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Smarcd3Q6P9Z1 Crebzf-201ENSMUST00000061767 3376 ntAPPRIS P1 BASIC15.93■□□□□ 0.14
Smarcd3Q6P9Z1 Atp5d-203ENSMUST00000105367 1410 ntAPPRIS P1 TSL 5 BASIC15.93■□□□□ 0.14
Smarcd3Q6P9Z1 Ppfibp1-201ENSMUST00000016631 4851 ntAPPRIS P3 TSL 1 (best) BASIC15.93■□□□□ 0.14
Smarcd3Q6P9Z1 Cdv3-207ENSMUST00000190226 3107 ntTSL 5 BASIC15.92■□□□□ 0.14
Smarcd3Q6P9Z1 Slc2a8-201ENSMUST00000028129 2108 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Smarcd3Q6P9Z1 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Smarcd3Q6P9Z1 Fosl2-201ENSMUST00000031017 6537 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Smarcd3Q6P9Z1 Syngap1-204ENSMUST00000194598 6011 ntAPPRIS P2 TSL 5 BASIC15.92■□□□□ 0.14
Smarcd3Q6P9Z1 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
Smarcd3Q6P9Z1 Hapln2-201ENSMUST00000005014 1711 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Smarcd3Q6P9Z1 Arrb2-202ENSMUST00000084954 1732 ntTSL 5 BASIC15.92■□□□□ 0.14
Smarcd3Q6P9Z1 A530084C06Rik-201ENSMUST00000170573 3200 ntAPPRIS P1 BASIC15.92■□□□□ 0.14
Smarcd3Q6P9Z1 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC15.92■□□□□ 0.14
Smarcd3Q6P9Z1 Gm20390-201ENSMUST00000170303 991 ntAPPRIS P1 TSL 5 BASIC15.92■□□□□ 0.14
Smarcd3Q6P9Z1 Stx6-209ENSMUST00000195302 955 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Smarcd3Q6P9Z1 Gm44549-201ENSMUST00000208351 577 ntBASIC15.92■□□□□ 0.14
Smarcd3Q6P9Z1 Naxe-201ENSMUST00000029708 908 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Smarcd3Q6P9Z1 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Smarcd3Q6P9Z1 Il1rn-201ENSMUST00000114482 1986 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Smarcd3Q6P9Z1 Serinc2-201ENSMUST00000105996 1878 ntAPPRIS P3 TSL 1 (best) BASIC15.92■□□□□ 0.14
Smarcd3Q6P9Z1 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC15.92■□□□□ 0.14
Smarcd3Q6P9Z1 Met-203ENSMUST00000115443 6809 ntAPPRIS P1 TSL 5 BASIC15.92■□□□□ 0.14
Smarcd3Q6P9Z1 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Smarcd3Q6P9Z1 Lzts2-201ENSMUST00000039016 2825 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Smarcd3Q6P9Z1 Gm26885-201ENSMUST00000181920 1688 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Smarcd3Q6P9Z1 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Smarcd3Q6P9Z1 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Smarcd3Q6P9Z1 Zbtb9-201ENSMUST00000120016 2798 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Smarcd3Q6P9Z1 Ola1-201ENSMUST00000028517 2175 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Smarcd3Q6P9Z1 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC15.92■□□□□ 0.14
Smarcd3Q6P9Z1 Rcbtb2-226ENSMUST00000171767 2692 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Smarcd3Q6P9Z1 Matk-202ENSMUST00000117488 1980 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
Smarcd3Q6P9Z1 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC15.91■□□□□ 0.14
Smarcd3Q6P9Z1 Lrp12-202ENSMUST00000110305 4244 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Smarcd3Q6P9Z1 Sptbn4-202ENSMUST00000108362 4861 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Smarcd3Q6P9Z1 Donson-201ENSMUST00000023682 2360 ntAPPRIS P2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Smarcd3Q6P9Z1 Sh3bp1-201ENSMUST00000001226 2510 ntTSL 5 BASIC15.91■□□□□ 0.14
Retrieved 100 of 76,532 protein–RNA pairs in 31.9 ms