Protein–RNA interactions for Protein: Q6P4T2

Snrnp200, U5 small nuclear ribonucleoprotein 200 kDa helicase, mousemouse

Known RBP Predictions only

Length 2,136 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Snrnp200Q6P4T2 Slc30a5-205ENSMUST00000225922 2722 ntAPPRIS ALT2 BASIC16.42■□□□□ 0.22
Snrnp200Q6P4T2 Prdm6-201ENSMUST00000091900 2601 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Snrnp200Q6P4T2 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Snrnp200Q6P4T2 Plxdc1-202ENSMUST00000107564 619 ntTSL 2 BASIC16.42■□□□□ 0.22
Snrnp200Q6P4T2 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC16.42■□□□□ 0.22
Snrnp200Q6P4T2 Map3k7cl-201ENSMUST00000026700 1652 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Snrnp200Q6P4T2 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
Snrnp200Q6P4T2 Dleu2-208ENSMUST00000182768 1442 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Snrnp200Q6P4T2 Tmem47-203ENSMUST00000171953 1801 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Snrnp200Q6P4T2 Gm10231-201ENSMUST00000181584 441 ntBASIC16.41■□□□□ 0.22
Snrnp200Q6P4T2 Atp5g2-202ENSMUST00000185641 731 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Snrnp200Q6P4T2 Gm10175-202ENSMUST00000208752 441 ntBASIC16.41■□□□□ 0.22
Snrnp200Q6P4T2 Stk11-210ENSMUST00000213772 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Snrnp200Q6P4T2 Gm7370-201ENSMUST00000219471 767 ntBASIC16.41■□□□□ 0.22
Snrnp200Q6P4T2 Cenps-201ENSMUST00000030813 1110 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Snrnp200Q6P4T2 Bax-201ENSMUST00000033093 867 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Snrnp200Q6P4T2 Atp5g2-201ENSMUST00000075630 441 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Snrnp200Q6P4T2 Acvr1c-204ENSMUST00000112608 1497 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
Snrnp200Q6P4T2 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Snrnp200Q6P4T2 Mpst-203ENSMUST00000169133 1309 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
Snrnp200Q6P4T2 8030462N17Rik-201ENSMUST00000074653 3418 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Snrnp200Q6P4T2 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC16.41■□□□□ 0.22
Snrnp200Q6P4T2 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Snrnp200Q6P4T2 Cdk10-201ENSMUST00000036880 1642 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Snrnp200Q6P4T2 Mycn-202ENSMUST00000130990 2522 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Snrnp200Q6P4T2 Krt13-201ENSMUST00000007275 1654 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Snrnp200Q6P4T2 Gm18959-201ENSMUST00000208954 655 ntBASIC16.4■□□□□ 0.22
Snrnp200Q6P4T2 Prok1-201ENSMUST00000049852 813 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Snrnp200Q6P4T2 Hist1h2aj-201ENSMUST00000091710 352 ntBASIC16.4■□□□□ 0.22
Snrnp200Q6P4T2 Bub3-201ENSMUST00000084502 2218 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Snrnp200Q6P4T2 Rasl10b-202ENSMUST00000108140 3156 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
Snrnp200Q6P4T2 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Snrnp200Q6P4T2 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
Snrnp200Q6P4T2 Dnajb2-208ENSMUST00000188346 1823 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Snrnp200Q6P4T2 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Snrnp200Q6P4T2 Gm43808-201ENSMUST00000202534 2065 ntBASIC16.4■□□□□ 0.22
Snrnp200Q6P4T2 Gm27463-201ENSMUST00000183569 57 ntBASIC16.4■□□□□ 0.22
Snrnp200Q6P4T2 Gm18032-201ENSMUST00000222541 538 ntBASIC16.4■□□□□ 0.22
Snrnp200Q6P4T2 Zbtb24-202ENSMUST00000213797 2734 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Snrnp200Q6P4T2 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC16.4■□□□□ 0.22
Snrnp200Q6P4T2 Ccdc126-201ENSMUST00000055559 2351 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Snrnp200Q6P4T2 Tm7sf2-201ENSMUST00000025713 1471 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
Snrnp200Q6P4T2 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Snrnp200Q6P4T2 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC16.39■□□□□ 0.21
Snrnp200Q6P4T2 Trim45-202ENSMUST00000094048 1815 ntTSL 5 BASIC16.39■□□□□ 0.21
Snrnp200Q6P4T2 Kcnab3-201ENSMUST00000018614 2538 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Snrnp200Q6P4T2 St3gal3-203ENSMUST00000106410 2225 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Snrnp200Q6P4T2 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Snrnp200Q6P4T2 Mtrf1l-201ENSMUST00000019908 2588 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Snrnp200Q6P4T2 Cep57-208ENSMUST00000147115 2262 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Snrnp200Q6P4T2 Sgta-201ENSMUST00000005067 1969 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Snrnp200Q6P4T2 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Snrnp200Q6P4T2 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Snrnp200Q6P4T2 AC121577.1-201ENSMUST00000227302 707 ntBASIC16.39■□□□□ 0.21
Snrnp200Q6P4T2 Dbn1-202ENSMUST00000109921 2378 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Snrnp200Q6P4T2 Asnsd1-201ENSMUST00000027264 2442 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Snrnp200Q6P4T2 Pagr1a-202ENSMUST00000200948 1430 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Snrnp200Q6P4T2 Gm42742-205ENSMUST00000202798 1412 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Snrnp200Q6P4T2 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC16.39■□□□□ 0.21
Snrnp200Q6P4T2 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Snrnp200Q6P4T2 Gprc5c-203ENSMUST00000122967 1709 ntTSL 5 BASIC16.39■□□□□ 0.21
Snrnp200Q6P4T2 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC16.39■□□□□ 0.21
Snrnp200Q6P4T2 Gm42417-201ENSMUST00000191849 2256 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Snrnp200Q6P4T2 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Snrnp200Q6P4T2 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Snrnp200Q6P4T2 Alg5-201ENSMUST00000044567 1471 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Snrnp200Q6P4T2 Abhd10-201ENSMUST00000066983 2848 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Snrnp200Q6P4T2 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC16.38■□□□□ 0.21
Snrnp200Q6P4T2 Gm16863-201ENSMUST00000181476 2431 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Snrnp200Q6P4T2 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Snrnp200Q6P4T2 Zfp119b-201ENSMUST00000056147 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Snrnp200Q6P4T2 Gm45606-201ENSMUST00000209836 2795 ntBASIC16.38■□□□□ 0.21
Snrnp200Q6P4T2 Arrdc4-202ENSMUST00000118110 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Snrnp200Q6P4T2 4930405A21Rik-202ENSMUST00000139042 994 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Snrnp200Q6P4T2 Gm9694-201ENSMUST00000193347 1189 ntBASIC16.38■□□□□ 0.21
Snrnp200Q6P4T2 Coa6-201ENSMUST00000059093 747 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Snrnp200Q6P4T2 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Snrnp200Q6P4T2 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Snrnp200Q6P4T2 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Snrnp200Q6P4T2 Plac9a-201ENSMUST00000052286 1555 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Snrnp200Q6P4T2 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
Snrnp200Q6P4T2 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Snrnp200Q6P4T2 Slc23a4-205ENSMUST00000201355 2003 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
Snrnp200Q6P4T2 Bmp8a-201ENSMUST00000040496 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Snrnp200Q6P4T2 Spata25-201ENSMUST00000017911 786 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Snrnp200Q6P4T2 Gm26643-201ENSMUST00000180854 1274 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Snrnp200Q6P4T2 AC122465.1-201ENSMUST00000220813 1209 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Snrnp200Q6P4T2 E030042O20Rik-201ENSMUST00000135244 1427 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Snrnp200Q6P4T2 0610012G03Rik-201ENSMUST00000202722 1445 ntAPPRIS P1 BASIC16.37■□□□□ 0.21
Snrnp200Q6P4T2 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Snrnp200Q6P4T2 Vps53-203ENSMUST00000108419 2209 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Snrnp200Q6P4T2 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Snrnp200Q6P4T2 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Snrnp200Q6P4T2 Arl1-202ENSMUST00000116234 2080 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Snrnp200Q6P4T2 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Snrnp200Q6P4T2 Prss54-205ENSMUST00000213096 1501 ntAPPRIS P3 TSL 5 BASIC16.37■□□□□ 0.21
Snrnp200Q6P4T2 Fam229a-201ENSMUST00000106043 558 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Snrnp200Q6P4T2 Gm14453-201ENSMUST00000139677 553 ntTSL 3 BASIC16.37■□□□□ 0.21
Snrnp200Q6P4T2 Pih1d2-201ENSMUST00000000171 1256 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Snrnp200Q6P4T2 Gadd45b-203ENSMUST00000220246 732 ntTSL 2 BASIC16.37■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 17.7 ms