Protein–RNA interactions for Protein: Q6NSQ5

Sp140, Sp140 nuclear body protein, mousemouse

Predictions only

Length 534 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sp140Q6NSQ5 Tnfaip8l2-201ENSMUST00000013851 1122 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Sp140Q6NSQ5 Gm20635-201ENSMUST00000176473 1287 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Sp140Q6NSQ5 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Sp140Q6NSQ5 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Sp140Q6NSQ5 Gm36736-201ENSMUST00000206060 646 ntTSL 3 BASIC17.63■□□□□ 0.41
Sp140Q6NSQ5 Hist1h2ap-201ENSMUST00000081342 482 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
Sp140Q6NSQ5 Donson-201ENSMUST00000023682 2360 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Sp140Q6NSQ5 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Sp140Q6NSQ5 Sntg2-201ENSMUST00000021004 2411 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Sp140Q6NSQ5 Piezo2-201ENSMUST00000046860 2849 ntTSL 5 BASIC17.63■□□□□ 0.41
Sp140Q6NSQ5 Dhrs7-201ENSMUST00000021512 1385 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Sp140Q6NSQ5 A130014A01Rik-201ENSMUST00000183021 2323 ntBASIC17.63■□□□□ 0.41
Sp140Q6NSQ5 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Sp140Q6NSQ5 P2rx5-201ENSMUST00000006104 2395 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Sp140Q6NSQ5 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Sp140Q6NSQ5 Tarbp1-201ENSMUST00000170518 6383 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
Sp140Q6NSQ5 Wasf3-201ENSMUST00000016143 5196 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Sp140Q6NSQ5 Map3k7-202ENSMUST00000080933 5669 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
Sp140Q6NSQ5 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Sp140Q6NSQ5 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Sp140Q6NSQ5 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC17.62■□□□□ 0.41
Sp140Q6NSQ5 CT025689.6-201ENSMUST00000224991 1104 ntBASIC17.62■□□□□ 0.41
Sp140Q6NSQ5 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
Sp140Q6NSQ5 Nfe2l1-202ENSMUST00000107657 3869 ntAPPRIS P3 TSL 5 BASIC17.62■□□□□ 0.41
Sp140Q6NSQ5 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
Sp140Q6NSQ5 Rbbp7-203ENSMUST00000112327 1862 ntTSL 5 BASIC17.62■□□□□ 0.41
Sp140Q6NSQ5 Snx15-201ENSMUST00000025702 1635 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Sp140Q6NSQ5 Nsmf-201ENSMUST00000006646 2922 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
Sp140Q6NSQ5 Ankra2-203ENSMUST00000123924 2328 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Sp140Q6NSQ5 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Sp140Q6NSQ5 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Sp140Q6NSQ5 Zbtb24-201ENSMUST00000080771 2844 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Sp140Q6NSQ5 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Sp140Q6NSQ5 Gm37292-201ENSMUST00000192062 758 ntBASIC17.61■□□□□ 0.41
Sp140Q6NSQ5 Kcnn4-203ENSMUST00000205626 461 ntTSL 5 BASIC17.61■□□□□ 0.41
Sp140Q6NSQ5 6230400D17Rik-202ENSMUST00000224976 1019 ntBASIC17.61■□□□□ 0.41
Sp140Q6NSQ5 Lonp1-201ENSMUST00000047226 2963 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Sp140Q6NSQ5 Scarf2-201ENSMUST00000012161 3302 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Sp140Q6NSQ5 Atrnl1-201ENSMUST00000077282 6581 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Sp140Q6NSQ5 Ankrd9-202ENSMUST00000128353 2577 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Sp140Q6NSQ5 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
Sp140Q6NSQ5 Acss2-202ENSMUST00000065973 2876 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Sp140Q6NSQ5 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Sp140Q6NSQ5 Cdipt-201ENSMUST00000032920 1974 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Sp140Q6NSQ5 Bpifb4-203ENSMUST00000109759 2115 ntAPPRIS P2 TSL 5 BASIC17.6■□□□□ 0.41
Sp140Q6NSQ5 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
Sp140Q6NSQ5 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Sp140Q6NSQ5 Prdm11-201ENSMUST00000111272 3012 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
Sp140Q6NSQ5 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Sp140Q6NSQ5 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC17.6■□□□□ 0.41
Sp140Q6NSQ5 Gm44878-201ENSMUST00000205812 1295 ntBASIC17.6■□□□□ 0.41
Sp140Q6NSQ5 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC17.6■□□□□ 0.41
Sp140Q6NSQ5 A930018P22Rik-201ENSMUST00000040374 822 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Sp140Q6NSQ5 Trip10-205ENSMUST00000224885 2136 ntAPPRIS ALT2 BASIC17.6■□□□□ 0.41
Sp140Q6NSQ5 Adrb2-201ENSMUST00000053640 2143 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
Sp140Q6NSQ5 Fam57b-201ENSMUST00000079423 2328 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Sp140Q6NSQ5 Msx2-201ENSMUST00000021922 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Sp140Q6NSQ5 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
Sp140Q6NSQ5 Mlxip-202ENSMUST00000111596 2653 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Sp140Q6NSQ5 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
Sp140Q6NSQ5 Atxn7l2-204ENSMUST00000119650 2274 ntTSL 5 BASIC17.59■□□□□ 0.41
Sp140Q6NSQ5 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Sp140Q6NSQ5 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Sp140Q6NSQ5 Gm38534-201ENSMUST00000206566 1909 ntTSL 5 BASIC17.59■□□□□ 0.41
Sp140Q6NSQ5 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC17.59■□□□□ 0.41
Sp140Q6NSQ5 Lrriq4-203ENSMUST00000172350 1797 ntAPPRIS P3 TSL 5 BASIC17.59■□□□□ 0.41
Sp140Q6NSQ5 Gm19721-201ENSMUST00000195284 1764 ntBASIC17.59■□□□□ 0.41
Sp140Q6NSQ5 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC17.59■□□□□ 0.41
Sp140Q6NSQ5 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Sp140Q6NSQ5 9530080O11Rik-201ENSMUST00000137239 1475 ntTSL 2 BASIC17.59■□□□□ 0.41
Sp140Q6NSQ5 Tlcd1-204ENSMUST00000127587 1412 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
Sp140Q6NSQ5 Nrn1-203ENSMUST00000223611 1443 ntBASIC17.59■□□□□ 0.41
Sp140Q6NSQ5 Rbm39-202ENSMUST00000109584 667 ntTSL 5 BASIC17.59■□□□□ 0.41
Sp140Q6NSQ5 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
Sp140Q6NSQ5 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
Sp140Q6NSQ5 Gabarapl1-202ENSMUST00000204487 902 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Sp140Q6NSQ5 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Sp140Q6NSQ5 Vgll2-201ENSMUST00000058347 966 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Sp140Q6NSQ5 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Sp140Q6NSQ5 Gm16499-203ENSMUST00000204633 2177 ntBASIC17.59■□□□□ 0.41
Sp140Q6NSQ5 Cdv3-207ENSMUST00000190226 3107 ntTSL 5 BASIC17.58■□□□□ 0.41
Sp140Q6NSQ5 Rap2a-201ENSMUST00000062117 4191 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Sp140Q6NSQ5 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
Sp140Q6NSQ5 Ilk-212ENSMUST00000163389 1749 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Sp140Q6NSQ5 Parg-208ENSMUST00000170840 2894 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.41
Sp140Q6NSQ5 Tmx1-201ENSMUST00000021471 2795 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Sp140Q6NSQ5 Tmtc4-209ENSMUST00000148661 2719 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Sp140Q6NSQ5 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
Sp140Q6NSQ5 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.41
Sp140Q6NSQ5 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
Sp140Q6NSQ5 Zcchc4-203ENSMUST00000113904 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.41
Sp140Q6NSQ5 Dcps-202ENSMUST00000119847 1445 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
Sp140Q6NSQ5 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Sp140Q6NSQ5 Lrrc73-201ENSMUST00000095262 1384 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Sp140Q6NSQ5 Mettl4-ps1-202ENSMUST00000130218 1323 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Sp140Q6NSQ5 Zdhhc6-207ENSMUST00000224897 2168 ntAPPRIS P1 BASIC17.58■□□□□ 0.4
Sp140Q6NSQ5 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Sp140Q6NSQ5 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC17.58■□□□□ 0.4
Sp140Q6NSQ5 Gm18666-201ENSMUST00000190039 958 ntBASIC17.58■□□□□ 0.4
Sp140Q6NSQ5 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC17.58■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 40.3 ms