Protein–RNA interactions for Protein: Q6A009

Ltn1, E3 ubiquitin-protein ligase listerin, mousemouse

Predictions only

Length 1,767 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ltn1Q6A009 Lrrc57-204ENSMUST00000102499 1961 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Ltn1Q6A009 Meox1-201ENSMUST00000057054 2228 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Ltn1Q6A009 Helt-201ENSMUST00000058636 1541 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Ltn1Q6A009 Gm16712-201ENSMUST00000181962 1960 ntTSL 2 BASIC20.6■□□□□ 0.89
Ltn1Q6A009 Gcat-202ENSMUST00000171999 1763 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Ltn1Q6A009 Dtnbp1-203ENSMUST00000220555 1589 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
Ltn1Q6A009 Rpl3l-202ENSMUST00000170239 1375 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
Ltn1Q6A009 Hikeshi-207ENSMUST00000207309 835 ntTSL 5 BASIC20.6■□□□□ 0.89
Ltn1Q6A009 AC153889.1-201ENSMUST00000219257 330 ntBASIC20.6■□□□□ 0.89
Ltn1Q6A009 AC122351.1-201ENSMUST00000220467 126 ntBASIC20.6■□□□□ 0.89
Ltn1Q6A009 Ppib-201ENSMUST00000034947 892 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Ltn1Q6A009 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Ltn1Q6A009 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Ltn1Q6A009 Ddhd2-206ENSMUST00000211688 2265 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Ltn1Q6A009 2810425M01Rik-201ENSMUST00000180790 1850 ntTSL 5 BASIC20.6■□□□□ 0.89
Ltn1Q6A009 Lrrc25-201ENSMUST00000052437 1313 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Ltn1Q6A009 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
Ltn1Q6A009 Gprc5c-203ENSMUST00000122967 1709 ntTSL 5 BASIC20.59■□□□□ 0.89
Ltn1Q6A009 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC20.59■□□□□ 0.89
Ltn1Q6A009 Gm16181-201ENSMUST00000118793 567 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Ltn1Q6A009 Hrh3-204ENSMUST00000165248 1224 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
Ltn1Q6A009 Epsti1-202ENSMUST00000169978 1175 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
Ltn1Q6A009 Gm28402-201ENSMUST00000188574 373 ntTSL 3 BASIC20.59■□□□□ 0.89
Ltn1Q6A009 Arl5b-206ENSMUST00000193836 481 ntTSL 2 BASIC20.59■□□□□ 0.89
Ltn1Q6A009 Epsti1-203ENSMUST00000227903 1178 ntAPPRIS ALT2 BASIC20.59■□□□□ 0.89
Ltn1Q6A009 Nme3-201ENSMUST00000024978 715 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Ltn1Q6A009 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Ltn1Q6A009 Racgap1-213ENSMUST00000171702 3052 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Ltn1Q6A009 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Ltn1Q6A009 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Ltn1Q6A009 Scml4-203ENSMUST00000105495 1033 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Ltn1Q6A009 Alkal1-201ENSMUST00000133144 971 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Ltn1Q6A009 E2f7-205ENSMUST00000173634 827 ntTSL 2 BASIC20.59■□□□□ 0.89
Ltn1Q6A009 Birc2-201ENSMUST00000054878 378 ntBASIC20.59■□□□□ 0.89
Ltn1Q6A009 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Ltn1Q6A009 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Ltn1Q6A009 Alas2-201ENSMUST00000066337 2037 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.89
Ltn1Q6A009 Sox18-201ENSMUST00000054491 1620 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Ltn1Q6A009 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Ltn1Q6A009 Zkscan4-202ENSMUST00000225845 1506 ntBASIC20.58■□□□□ 0.89
Ltn1Q6A009 Lhx1os-201ENSMUST00000126072 589 ntTSL 3 BASIC20.58■□□□□ 0.89
Ltn1Q6A009 Mir8098-201ENSMUST00000184011 137 ntBASIC20.58■□□□□ 0.89
Ltn1Q6A009 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.88
Ltn1Q6A009 Eif3b-201ENSMUST00000100507 2945 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Ltn1Q6A009 Sfrp4-201ENSMUST00000002883 1764 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Ltn1Q6A009 Ino80e-201ENSMUST00000050833 1944 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
Ltn1Q6A009 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.88
Ltn1Q6A009 Kcnk10-203ENSMUST00000221305 1357 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Ltn1Q6A009 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Ltn1Q6A009 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Ltn1Q6A009 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC20.57■□□□□ 0.88
Ltn1Q6A009 Btn1a1-202ENSMUST00000110434 1077 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Ltn1Q6A009 Zfp133-ps-202ENSMUST00000124788 1079 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Ltn1Q6A009 Taco1os-201ENSMUST00000140736 644 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Ltn1Q6A009 Gm26661-201ENSMUST00000181025 471 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
Ltn1Q6A009 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Ltn1Q6A009 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
Ltn1Q6A009 Aldh7a1-201ENSMUST00000066208 1914 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
Ltn1Q6A009 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Ltn1Q6A009 Smim3-201ENSMUST00000042710 1984 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Ltn1Q6A009 Gas2-201ENSMUST00000051912 2181 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Ltn1Q6A009 Speg-202ENSMUST00000113587 1254 ntTSL 5 BASIC20.57■□□□□ 0.88
Ltn1Q6A009 Psma3-204ENSMUST00000160864 859 ntTSL 5 BASIC20.57■□□□□ 0.88
Ltn1Q6A009 Gm27000-201ENSMUST00000182943 842 ntBASIC20.57■□□□□ 0.88
Ltn1Q6A009 Ighv6-1-201ENSMUST00000193612 343 ntBASIC20.57■□□□□ 0.88
Ltn1Q6A009 Tmed4-201ENSMUST00000004508 2003 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Ltn1Q6A009 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Ltn1Q6A009 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
Ltn1Q6A009 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Ltn1Q6A009 Zbtb25-201ENSMUST00000167011 1681 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
Ltn1Q6A009 Gm13524-201ENSMUST00000125869 662 ntTSL 3 BASIC20.56■□□□□ 0.88
Ltn1Q6A009 Prr3-202ENSMUST00000165613 767 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Ltn1Q6A009 Gm28659-201ENSMUST00000188013 759 ntBASIC20.56■□□□□ 0.88
Ltn1Q6A009 Thoc7-201ENSMUST00000065865 937 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Ltn1Q6A009 Dgcr6-202ENSMUST00000076757 894 ntTSL 5 BASIC20.56■□□□□ 0.88
Ltn1Q6A009 Olfr1232-201ENSMUST00000099785 936 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
Ltn1Q6A009 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
Ltn1Q6A009 Matn4-202ENSMUST00000103104 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Ltn1Q6A009 Ano10-206ENSMUST00000216670 2108 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Ltn1Q6A009 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Ltn1Q6A009 Gm12536-201ENSMUST00000129102 358 ntTSL 2 BASIC20.55■□□□□ 0.88
Ltn1Q6A009 Sftpb-201ENSMUST00000070437 1131 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
Ltn1Q6A009 Ubxn11-202ENSMUST00000074690 1573 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Ltn1Q6A009 Slc47a2-201ENSMUST00000093029 2377 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Ltn1Q6A009 Pomgnt2-207ENSMUST00000217610 2413 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Ltn1Q6A009 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Ltn1Q6A009 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
Ltn1Q6A009 Med14-201ENSMUST00000076016 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Ltn1Q6A009 Sharpin-201ENSMUST00000023211 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Ltn1Q6A009 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Ltn1Q6A009 Gm5828-201ENSMUST00000071842 1860 ntBASIC20.54■□□□□ 0.88
Ltn1Q6A009 Ppil3-202ENSMUST00000114345 1175 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Ltn1Q6A009 Gm13884-201ENSMUST00000118103 829 ntBASIC20.54■□□□□ 0.88
Ltn1Q6A009 Mis18bp1-202ENSMUST00000124201 717 ntTSL 3 BASIC20.54■□□□□ 0.88
Ltn1Q6A009 Ankrd40-201ENSMUST00000021227 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Ltn1Q6A009 Ppp2r2d-207ENSMUST00000155672 1938 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Ltn1Q6A009 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Ltn1Q6A009 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Ltn1Q6A009 Tsc22d1-201ENSMUST00000022587 1762 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Ltn1Q6A009 Zdhhc6-207ENSMUST00000224897 2168 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
Retrieved 100 of 76,532 protein–RNA pairs in 29.3 ms