Protein–RNA interactions for Protein: Q62504

Spen, Msx2-interacting protein, mousemouse

Known RBP Predictions only

Length 3,644 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SpenQ62504 Iqcd-202ENSMUST00000094391 1673 ntAPPRIS P2 TSL 1 (best) BASIC15.44■□□□□ 0.06
SpenQ62504 Tm9sf2-203ENSMUST00000171318 1494 ntTSL 5 BASIC15.44■□□□□ 0.06
SpenQ62504 Skp1a-203ENSMUST00000109072 1754 ntAPPRIS P1 TSL 5 BASIC15.44■□□□□ 0.06
SpenQ62504 Slc39a1-201ENSMUST00000015467 2364 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
SpenQ62504 Mtmr14-201ENSMUST00000113146 2676 ntAPPRIS P2 TSL 1 (best) BASIC15.44■□□□□ 0.06
SpenQ62504 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
SpenQ62504 Blcap-201ENSMUST00000088494 2108 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
SpenQ62504 Gm24841-201ENSMUST00000158676 357 ntBASIC15.44■□□□□ 0.06
SpenQ62504 Pla2g10-201ENSMUST00000023364 1423 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
SpenQ62504 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
SpenQ62504 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
SpenQ62504 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
SpenQ62504 Gm32050-201ENSMUST00000209793 638 ntTSL 3 BASIC15.44■□□□□ 0.06
SpenQ62504 Gm10060-201ENSMUST00000212002 111 ntBASIC15.44■□□□□ 0.06
SpenQ62504 Cyp26b1-203ENSMUST00000204109 1340 ntTSL 5 BASIC15.44■□□□□ 0.06
SpenQ62504 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC15.44■□□□□ 0.06
SpenQ62504 Nlrp5-ps-201ENSMUST00000044683 1913 ntTSL 2 BASIC15.44■□□□□ 0.06
SpenQ62504 Tfap4-201ENSMUST00000005862 2113 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
SpenQ62504 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC15.43■□□□□ 0.06
SpenQ62504 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC15.43■□□□□ 0.06
SpenQ62504 Gm43575-201ENSMUST00000196420 516 ntBASIC15.43■□□□□ 0.06
SpenQ62504 Ppp2r2d-207ENSMUST00000155672 1938 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
SpenQ62504 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
SpenQ62504 Chchd2-ps-201ENSMUST00000117487 462 ntBASIC15.43■□□□□ 0.06
SpenQ62504 Gm12350-201ENSMUST00000121208 462 ntBASIC15.43■□□□□ 0.06
SpenQ62504 Upp1-205ENSMUST00000164791 1252 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
SpenQ62504 Hs3st2-202ENSMUST00000206880 1149 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
SpenQ62504 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC15.43■□□□□ 0.06
SpenQ62504 Ube2f-201ENSMUST00000059743 1154 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
SpenQ62504 AC154855.1-201ENSMUST00000227353 1458 ntBASIC15.43■□□□□ 0.06
SpenQ62504 Tmem81-201ENSMUST00000058167 1742 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
SpenQ62504 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
SpenQ62504 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
SpenQ62504 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
SpenQ62504 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
SpenQ62504 Drap1-202ENSMUST00000113673 744 ntTSL 2 BASIC15.43■□□□□ 0.06
SpenQ62504 Auts2-212ENSMUST00000178555 309 ntBASIC15.43■□□□□ 0.06
SpenQ62504 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC15.43■□□□□ 0.06
SpenQ62504 Krt79-201ENSMUST00000023799 2097 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
SpenQ62504 4931422A03Rik-201ENSMUST00000056170 1037 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
SpenQ62504 Cd300c-201ENSMUST00000061637 690 ntAPPRIS ALT2 TSL 5 BASIC15.43■□□□□ 0.06
SpenQ62504 Eif5a-203ENSMUST00000071026 1286 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
SpenQ62504 Cd300c-202ENSMUST00000092466 700 ntAPPRIS P5 TSL 5 BASIC15.43■□□□□ 0.06
SpenQ62504 Tmem116-203ENSMUST00000094357 1366 ntAPPRIS ALT2 TSL 5 BASIC15.43■□□□□ 0.06
SpenQ62504 Lsmem1-201ENSMUST00000095760 1213 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
SpenQ62504 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
SpenQ62504 Krt13-201ENSMUST00000007275 1654 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
SpenQ62504 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC15.42■□□□□ 0.06
SpenQ62504 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC15.42■□□□□ 0.06
SpenQ62504 Lamtor5-201ENSMUST00000145735 881 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
SpenQ62504 Fbxo36-201ENSMUST00000097672 901 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
SpenQ62504 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
SpenQ62504 Tm7sf2-201ENSMUST00000025713 1471 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
SpenQ62504 Ascl2-202ENSMUST00000121862 814 ntAPPRIS ALT2 BASIC15.42■□□□□ 0.06
SpenQ62504 4930442P19Rik-201ENSMUST00000193163 1240 ntBASIC15.42■□□□□ 0.06
SpenQ62504 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
SpenQ62504 4933405L10Rik-201ENSMUST00000013302 1214 ntAPPRIS P2 TSL 1 (best) BASIC15.42■□□□□ 0.06
SpenQ62504 1700025N23Rik-201ENSMUST00000186189 915 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
SpenQ62504 Lat-206ENSMUST00000206793 1215 ntAPPRIS ALT2 TSL 5 BASIC15.42■□□□□ 0.06
SpenQ62504 AC161829.1-201ENSMUST00000220298 281 ntBASIC15.42■□□□□ 0.06
SpenQ62504 Zfp24-203ENSMUST00000153337 1513 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
SpenQ62504 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
SpenQ62504 Gm12895-201ENSMUST00000122214 226 ntBASIC15.41■□□□□ 0.06
SpenQ62504 Tpt1-205ENSMUST00000142061 996 ntTSL 5 BASIC15.41■□□□□ 0.06
SpenQ62504 AC159093.1-201ENSMUST00000227779 380 ntBASIC15.41■□□□□ 0.06
SpenQ62504 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
SpenQ62504 Racgap1-213ENSMUST00000171702 3052 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
SpenQ62504 Pou2f2-202ENSMUST00000108413 1599 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
SpenQ62504 Sdhb-201ENSMUST00000010007 1142 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
SpenQ62504 Mcub-204ENSMUST00000153506 1005 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
SpenQ62504 Rbm11-201ENSMUST00000046378 1400 ntAPPRIS P2 TSL 5 BASIC15.41■□□□□ 0.06
SpenQ62504 Tmem97-201ENSMUST00000103242 1375 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
SpenQ62504 Auh-202ENSMUST00000110031 3235 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
SpenQ62504 Slc25a43-201ENSMUST00000047655 1111 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
SpenQ62504 Mamstr-201ENSMUST00000148532 1606 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
SpenQ62504 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
SpenQ62504 Ccl27a-217ENSMUST00000155240 343 ntTSL 2 BASIC15.4■□□□□ 0.06
SpenQ62504 Dcdc2c-201ENSMUST00000020963 1041 ntTSL 5 BASIC15.4■□□□□ 0.06
SpenQ62504 Timm13-203ENSMUST00000218481 471 ntTSL 3 BASIC15.4■□□□□ 0.06
SpenQ62504 Shd-201ENSMUST00000044216 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
SpenQ62504 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
SpenQ62504 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
SpenQ62504 Slc25a3-206ENSMUST00000170810 1341 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
SpenQ62504 Tpm1-215ENSMUST00000113705 1759 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
SpenQ62504 Park7-203ENSMUST00000105674 937 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
SpenQ62504 Tmsb4x-202ENSMUST00000112175 864 ntTSL 2 BASIC15.4■□□□□ 0.06
SpenQ62504 Alkal1-201ENSMUST00000133144 971 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
SpenQ62504 Gm45669-201ENSMUST00000209808 459 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
SpenQ62504 Pdx1-201ENSMUST00000085591 2158 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
SpenQ62504 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
SpenQ62504 Tpt1-201ENSMUST00000110894 1169 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
SpenQ62504 AC124603.1-201ENSMUST00000223843 308 ntBASIC15.4■□□□□ 0.06
SpenQ62504 Lce3b-201ENSMUST00000046234 562 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
SpenQ62504 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC15.39■□□□□ 0.05
SpenQ62504 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
SpenQ62504 Nabp2-204ENSMUST00000166608 979 ntTSL 5 BASIC15.39■□□□□ 0.05
SpenQ62504 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC15.39■□□□□ 0.05
SpenQ62504 Abcg5-202ENSMUST00000163375 1613 ntTSL 5 BASIC15.39■□□□□ 0.05
SpenQ62504 Klhl33-201ENSMUST00000164415 1602 ntTSL 5 BASIC15.39■□□□□ 0.05
SpenQ62504 Rpl3l-202ENSMUST00000170239 1375 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
Retrieved 100 of 76,532 protein–RNA pairs in 24 ms