Protein–RNA interactions for Protein: Q62388

Atm, Serine-protein kinase ATM, mousemouse

Predictions only

Length 3,066 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AtmQ62388 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
AtmQ62388 Med11-202ENSMUST00000151013 445 ntTSL 2 BASIC16.45■□□□□ 0.22
AtmQ62388 Gm10052-201ENSMUST00000168019 960 ntBASIC16.45■□□□□ 0.22
AtmQ62388 Arl5b-206ENSMUST00000193836 481 ntTSL 2 BASIC16.45■□□□□ 0.22
AtmQ62388 Gm7729-201ENSMUST00000050143 801 ntBASIC16.45■□□□□ 0.22
AtmQ62388 Coro1a-201ENSMUST00000032949 1660 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
AtmQ62388 Dok5-201ENSMUST00000029075 1768 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
AtmQ62388 Cldn6-201ENSMUST00000024699 1506 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
AtmQ62388 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
AtmQ62388 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
AtmQ62388 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC16.45■□□□□ 0.22
AtmQ62388 Lamtor5-201ENSMUST00000145735 881 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
AtmQ62388 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
AtmQ62388 AW011738-201ENSMUST00000105140 1848 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
AtmQ62388 Wdr55-201ENSMUST00000049323 1498 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
AtmQ62388 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
AtmQ62388 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC16.45■□□□□ 0.22
AtmQ62388 Cnn2-202ENSMUST00000105374 926 ntTSL 5 BASIC16.44■□□□□ 0.22
AtmQ62388 Gm2756-201ENSMUST00000195851 400 ntBASIC16.44■□□□□ 0.22
AtmQ62388 4933412L11Rik-201ENSMUST00000203702 1044 ntBASIC16.44■□□□□ 0.22
AtmQ62388 Nme3-201ENSMUST00000024978 715 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
AtmQ62388 4930474H06Rik-201ENSMUST00000132822 1590 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
AtmQ62388 Mis18a-201ENSMUST00000099554 1333 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
AtmQ62388 Tecr-201ENSMUST00000019382 1158 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
AtmQ62388 Gm5186-201ENSMUST00000218781 920 ntBASIC16.44■□□□□ 0.22
AtmQ62388 Fbxo36-201ENSMUST00000097672 901 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
AtmQ62388 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
AtmQ62388 Tdrd12-201ENSMUST00000032701 1620 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
AtmQ62388 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
AtmQ62388 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
AtmQ62388 Iqcd-202ENSMUST00000094391 1673 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
AtmQ62388 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
AtmQ62388 Banf1-202ENSMUST00000170010 742 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
AtmQ62388 Hist2h3b-201ENSMUST00000098843 488 ntAPPRIS P1 BASIC16.44■□□□□ 0.22
AtmQ62388 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
AtmQ62388 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
AtmQ62388 Btf3-204ENSMUST00000134542 780 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
AtmQ62388 Ccl27a-217ENSMUST00000155240 343 ntTSL 2 BASIC16.43■□□□□ 0.22
AtmQ62388 Ctsg-201ENSMUST00000015583 1002 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
AtmQ62388 Fahd2a-201ENSMUST00000028848 1211 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
AtmQ62388 Ndufv2-203ENSMUST00000143987 1540 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
AtmQ62388 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
AtmQ62388 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
AtmQ62388 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
AtmQ62388 Krt13-201ENSMUST00000007275 1654 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
AtmQ62388 Pqlc1-208ENSMUST00000144468 1050 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
AtmQ62388 Tsen15-201ENSMUST00000015124 1133 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
AtmQ62388 Gm8797-201ENSMUST00000192045 490 ntAPPRIS P1 BASIC16.43■□□□□ 0.22
AtmQ62388 AC154855.1-201ENSMUST00000227353 1458 ntBASIC16.43■□□□□ 0.22
AtmQ62388 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
AtmQ62388 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
AtmQ62388 Gm8000-201ENSMUST00000188378 592 ntBASIC16.42■□□□□ 0.22
AtmQ62388 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
AtmQ62388 Dmtn-210ENSMUST00000228824 2377 ntBASIC16.42■□□□□ 0.22
AtmQ62388 Bend6-202ENSMUST00000115161 2231 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
AtmQ62388 Tm9sf2-203ENSMUST00000171318 1494 ntTSL 5 BASIC16.42■□□□□ 0.22
AtmQ62388 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
AtmQ62388 Tekt1-201ENSMUST00000021155 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
AtmQ62388 B3gnt4-201ENSMUST00000031384 1423 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
AtmQ62388 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
AtmQ62388 Hsd3b2-203ENSMUST00000177651 1122 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
AtmQ62388 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
AtmQ62388 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC16.42■□□□□ 0.22
AtmQ62388 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
AtmQ62388 Rbmx-206ENSMUST00000143310 1296 ntTSL 5 BASIC16.42■□□□□ 0.22
AtmQ62388 Hs3st2-202ENSMUST00000206880 1149 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
AtmQ62388 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
AtmQ62388 Tfap4-201ENSMUST00000005862 2113 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
AtmQ62388 H2-Bl-204ENSMUST00000184502 862 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
AtmQ62388 AC124569.2-201ENSMUST00000225998 818 ntBASIC16.41■□□□□ 0.22
AtmQ62388 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC16.41■□□□□ 0.22
AtmQ62388 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
AtmQ62388 Ilkap-201ENSMUST00000027534 1368 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
AtmQ62388 Blcap-201ENSMUST00000088494 2108 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
AtmQ62388 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
AtmQ62388 Ndufv1-202ENSMUST00000128787 1436 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
AtmQ62388 Ndufv1-207ENSMUST00000134479 1438 ntTSL 5 BASIC16.41■□□□□ 0.22
AtmQ62388 Klk12-202ENSMUST00000107970 1115 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
AtmQ62388 1190007I07Rik-202ENSMUST00000176200 586 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
AtmQ62388 Syngr2-206ENSMUST00000177131 935 ntAPPRIS ALT2 TSL 3 BASIC16.41■□□□□ 0.22
AtmQ62388 1190007I07Rik-203ENSMUST00000183363 406 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
AtmQ62388 AC138767.1-201ENSMUST00000222661 415 ntBASIC16.41■□□□□ 0.22
AtmQ62388 AC124603.1-201ENSMUST00000223843 308 ntBASIC16.41■□□□□ 0.22
AtmQ62388 1190007I07Rik-201ENSMUST00000079648 716 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
AtmQ62388 Gm5414-201ENSMUST00000062879 1659 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
AtmQ62388 Ppp2r1b-204ENSMUST00000174628 2195 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
AtmQ62388 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
AtmQ62388 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
AtmQ62388 Gm44924-201ENSMUST00000138087 421 ntTSL 3 BASIC16.4■□□□□ 0.22
AtmQ62388 Rpp40-202ENSMUST00000174230 1053 ntTSL 5 BASIC16.4■□□□□ 0.22
AtmQ62388 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC16.4■□□□□ 0.22
AtmQ62388 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
AtmQ62388 Serpinh1-202ENSMUST00000169437 2274 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
AtmQ62388 Gm4995-201ENSMUST00000117247 432 ntBASIC16.4■□□□□ 0.22
AtmQ62388 Sumo3-204ENSMUST00000129492 487 ntAPPRIS ALT2 TSL 2 BASIC16.4■□□□□ 0.22
AtmQ62388 Timm23-201ENSMUST00000013845 1173 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
AtmQ62388 Cebpzos-201ENSMUST00000063817 753 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
AtmQ62388 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
AtmQ62388 Skp1a-203ENSMUST00000109072 1754 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
AtmQ62388 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 20.1 ms