Protein–RNA interactions for Protein: Q60641

Nr1h4, Bile acid receptor, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nr1h4Q60641 Misp-205ENSMUST00000219305 2569 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Nr1h4Q60641 Rcbtb2-226ENSMUST00000171767 2692 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
Nr1h4Q60641 Cdon-202ENSMUST00000119129 7503 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
Nr1h4Q60641 Alad-202ENSMUST00000107444 1247 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Nr1h4Q60641 Gm29791-202ENSMUST00000207888 369 ntBASIC16.58■□□□□ 0.24
Nr1h4Q60641 Gm18671-201ENSMUST00000214826 683 ntBASIC16.58■□□□□ 0.24
Nr1h4Q60641 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC16.58■□□□□ 0.24
Nr1h4Q60641 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC16.58■□□□□ 0.24
Nr1h4Q60641 Snx15-201ENSMUST00000025702 1635 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Nr1h4Q60641 Serinc2-201ENSMUST00000105996 1878 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
Nr1h4Q60641 Lrrc43-202ENSMUST00000121444 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Nr1h4Q60641 Il17rb-202ENSMUST00000122205 2094 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
Nr1h4Q60641 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Nr1h4Q60641 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
Nr1h4Q60641 Sfrp1-201ENSMUST00000033952 4372 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Nr1h4Q60641 Dag1-201ENSMUST00000080435 4364 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Nr1h4Q60641 Prdm6-201ENSMUST00000091900 2601 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Nr1h4Q60641 Zdhhc24-201ENSMUST00000006632 2558 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Nr1h4Q60641 Gm26774-201ENSMUST00000181534 2401 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Nr1h4Q60641 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Nr1h4Q60641 Mfsd13a-202ENSMUST00000128041 2223 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Nr1h4Q60641 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Nr1h4Q60641 Pacsin3-215ENSMUST00000168916 1859 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Nr1h4Q60641 Gm26885-201ENSMUST00000181920 1688 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Nr1h4Q60641 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Nr1h4Q60641 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC16.57■□□□□ 0.24
Nr1h4Q60641 Hebp1-201ENSMUST00000045855 1058 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Nr1h4Q60641 Flt1-202ENSMUST00000031653 6895 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Nr1h4Q60641 Eml5-210ENSMUST00000223282 7595 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
Nr1h4Q60641 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC16.57■□□□□ 0.24
Nr1h4Q60641 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
Nr1h4Q60641 Slc2a8-201ENSMUST00000028129 2108 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Nr1h4Q60641 Rab11fip4-201ENSMUST00000017783 7156 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Nr1h4Q60641 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Nr1h4Q60641 Pdcl3-201ENSMUST00000027247 3914 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Nr1h4Q60641 Taf6l-205ENSMUST00000176496 2224 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Nr1h4Q60641 Rmdn3-201ENSMUST00000094695 2249 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Nr1h4Q60641 Gm26881-201ENSMUST00000180426 593 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Nr1h4Q60641 Mir8112-201ENSMUST00000184382 131 ntBASIC16.56■□□□□ 0.24
Nr1h4Q60641 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Nr1h4Q60641 Camk2n1-201ENSMUST00000050918 4444 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Nr1h4Q60641 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Nr1h4Q60641 Lhx6-203ENSMUST00000112963 3481 ntTSL 2 BASIC16.56■□□□□ 0.24
Nr1h4Q60641 Sncaip-205ENSMUST00000178011 3433 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
Nr1h4Q60641 Rap2a-201ENSMUST00000062117 4191 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Nr1h4Q60641 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC16.56■□□□□ 0.24
Nr1h4Q60641 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC16.56■□□□□ 0.24
Nr1h4Q60641 Fam98b-201ENSMUST00000028825 1861 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Nr1h4Q60641 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
Nr1h4Q60641 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC16.56■□□□□ 0.24
Nr1h4Q60641 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Nr1h4Q60641 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Nr1h4Q60641 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Nr1h4Q60641 Ptges3-202ENSMUST00000084771 1559 ntTSL 5 BASIC16.55■□□□□ 0.24
Nr1h4Q60641 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Nr1h4Q60641 Tbxas1-201ENSMUST00000003017 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Nr1h4Q60641 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC16.55■□□□□ 0.24
Nr1h4Q60641 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Nr1h4Q60641 Xpo6-213ENSMUST00000168189 4552 ntAPPRIS ALT1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Nr1h4Q60641 Sult2b1-204ENSMUST00000209739 1858 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
Nr1h4Q60641 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Nr1h4Q60641 Zdhhc12-202ENSMUST00000102865 1165 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Nr1h4Q60641 Etv2-201ENSMUST00000108147 1048 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Nr1h4Q60641 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC16.55■□□□□ 0.24
Nr1h4Q60641 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Nr1h4Q60641 AC153845.2-202ENSMUST00000213372 807 ntTSL 3 BASIC16.55■□□□□ 0.24
Nr1h4Q60641 Nes-201ENSMUST00000090973 6126 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Nr1h4Q60641 Stambp-206ENSMUST00000206400 2144 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Nr1h4Q60641 Ube2d3-202ENSMUST00000166033 2504 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Nr1h4Q60641 Uri1-201ENSMUST00000085513 3441 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Nr1h4Q60641 Tubgcp4-203ENSMUST00000110658 4250 ntAPPRIS ALT1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Nr1h4Q60641 A530016L24Rik-202ENSMUST00000223266 1547 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Nr1h4Q60641 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Nr1h4Q60641 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Nr1h4Q60641 Appbp2-201ENSMUST00000018625 6463 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Nr1h4Q60641 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC16.54■□□□□ 0.24
Nr1h4Q60641 Pds5b-208ENSMUST00000202170 6598 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
Nr1h4Q60641 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Nr1h4Q60641 Fxyd6-201ENSMUST00000085939 1788 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Nr1h4Q60641 Dnlz-201ENSMUST00000028295 2916 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Nr1h4Q60641 Foxp4-204ENSMUST00000113265 3999 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Nr1h4Q60641 5031425F14Rik-201ENSMUST00000127920 2098 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Nr1h4Q60641 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
Nr1h4Q60641 Pdcd5-201ENSMUST00000118501 684 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Nr1h4Q60641 Gadd45b-201ENSMUST00000015456 1284 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Nr1h4Q60641 Gm4553-201ENSMUST00000168049 714 ntAPPRIS ALT2 BASIC16.54■□□□□ 0.24
Nr1h4Q60641 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC16.54■□□□□ 0.24
Nr1h4Q60641 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Nr1h4Q60641 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC16.54■□□□□ 0.24
Nr1h4Q60641 D830036C21Rik-201ENSMUST00000207444 453 ntTSL 3 BASIC16.54■□□□□ 0.24
Nr1h4Q60641 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC16.54■□□□□ 0.24
Nr1h4Q60641 Dusp9-201ENSMUST00000019701 2722 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Nr1h4Q60641 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Nr1h4Q60641 A930017K11Rik-201ENSMUST00000162431 2539 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Nr1h4Q60641 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Nr1h4Q60641 Eda-203ENSMUST00000113776 5105 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Nr1h4Q60641 Gda-201ENSMUST00000087600 5428 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Nr1h4Q60641 Uso1-204ENSMUST00000202155 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Nr1h4Q60641 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC16.54■□□□□ 0.24
Nr1h4Q60641 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 20.7 ms