Protein–RNA interactions for Protein: Q5SP85

Ccdc85a, Coiled-coil domain-containing protein 85A, mousemouse

Predictions only

Length 500 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc85aQ5SP85 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Ccdc85aQ5SP85 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC19.17■□□□□ 0.66
Ccdc85aQ5SP85 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Ccdc85aQ5SP85 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Ccdc85aQ5SP85 Alas2-201ENSMUST00000066337 2037 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
Ccdc85aQ5SP85 Babam1-201ENSMUST00000002473 1433 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Ccdc85aQ5SP85 Dynll2-202ENSMUST00000107923 2443 ntAPPRIS P1 TSL 3 BASIC19.16■□□□□ 0.66
Ccdc85aQ5SP85 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Ccdc85aQ5SP85 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Ccdc85aQ5SP85 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Ccdc85aQ5SP85 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
Ccdc85aQ5SP85 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
Ccdc85aQ5SP85 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Ccdc85aQ5SP85 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Ccdc85aQ5SP85 Rnf141-201ENSMUST00000106682 1101 ntAPPRIS P1 TSL 3 BASIC19.16■□□□□ 0.66
Ccdc85aQ5SP85 Gm25925-201ENSMUST00000158314 306 ntBASIC19.16■□□□□ 0.66
Ccdc85aQ5SP85 Bex3-204ENSMUST00000178632 933 ntAPPRIS P3 TSL 2 BASIC19.16■□□□□ 0.66
Ccdc85aQ5SP85 Snhg4-201ENSMUST00000181664 1190 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Ccdc85aQ5SP85 Gm32031-203ENSMUST00000208993 649 ntTSL 2 BASIC19.16■□□□□ 0.66
Ccdc85aQ5SP85 AC156576.2-201ENSMUST00000222752 503 ntTSL 5 BASIC19.16■□□□□ 0.66
Ccdc85aQ5SP85 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Ccdc85aQ5SP85 BC021767-201ENSMUST00000126387 1716 ntBASIC19.16■□□□□ 0.66
Ccdc85aQ5SP85 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Ccdc85aQ5SP85 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
Ccdc85aQ5SP85 Tm6sf2-201ENSMUST00000049197 1418 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
Ccdc85aQ5SP85 Bnipl-201ENSMUST00000098871 1414 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Ccdc85aQ5SP85 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC19.15■□□□□ 0.66
Ccdc85aQ5SP85 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC19.15■□□□□ 0.66
Ccdc85aQ5SP85 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Ccdc85aQ5SP85 Gpr142-202ENSMUST00000106584 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Ccdc85aQ5SP85 Cldn7-204ENSMUST00000108597 913 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
Ccdc85aQ5SP85 Rerg-204ENSMUST00000149100 635 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Ccdc85aQ5SP85 A830052D11Rik-201ENSMUST00000181729 1130 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Ccdc85aQ5SP85 Gm28626-201ENSMUST00000187004 520 ntTSL 2 BASIC19.15■□□□□ 0.66
Ccdc85aQ5SP85 Gm21057-201ENSMUST00000206022 670 ntTSL 3 BASIC19.15■□□□□ 0.66
Ccdc85aQ5SP85 Nudt21-204ENSMUST00000212981 1184 ntTSL 3 BASIC19.15■□□□□ 0.66
Ccdc85aQ5SP85 CAAA01066804.1-201ENSMUST00000217800 611 ntTSL 3 BASIC19.15■□□□□ 0.66
Ccdc85aQ5SP85 Mrpl36-203ENSMUST00000222030 680 ntAPPRIS P1 TSL 3 BASIC19.15■□□□□ 0.66
Ccdc85aQ5SP85 Ppib-201ENSMUST00000034947 892 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Ccdc85aQ5SP85 Gpr142-201ENSMUST00000045319 1098 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
Ccdc85aQ5SP85 Birc2-201ENSMUST00000054878 378 ntBASIC19.15■□□□□ 0.66
Ccdc85aQ5SP85 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Ccdc85aQ5SP85 1810043G02Rik-201ENSMUST00000105397 1818 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Ccdc85aQ5SP85 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
Ccdc85aQ5SP85 Klhdc8b-214ENSMUST00000195435 1612 ntTSL 5 BASIC19.14■□□□□ 0.66
Ccdc85aQ5SP85 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC19.14■□□□□ 0.66
Ccdc85aQ5SP85 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Ccdc85aQ5SP85 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Ccdc85aQ5SP85 Camsap2-201ENSMUST00000048309 7823 ntAPPRIS P3 TSL 5 BASIC19.14■□□□□ 0.65
Ccdc85aQ5SP85 Gm16181-201ENSMUST00000118793 567 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Ccdc85aQ5SP85 Mpst-202ENSMUST00000167140 1279 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
Ccdc85aQ5SP85 F420014N23Rik-202ENSMUST00000219079 659 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Ccdc85aQ5SP85 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Ccdc85aQ5SP85 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Ccdc85aQ5SP85 Ubl7-201ENSMUST00000163329 1364 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
Ccdc85aQ5SP85 Rpl3l-202ENSMUST00000170239 1375 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
Ccdc85aQ5SP85 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
Ccdc85aQ5SP85 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Ccdc85aQ5SP85 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Ccdc85aQ5SP85 Dnajc2-201ENSMUST00000030771 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Ccdc85aQ5SP85 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Ccdc85aQ5SP85 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Ccdc85aQ5SP85 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC19.13■□□□□ 0.65
Ccdc85aQ5SP85 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Ccdc85aQ5SP85 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC19.13■□□□□ 0.65
Ccdc85aQ5SP85 Cd82-204ENSMUST00000111257 1003 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
Ccdc85aQ5SP85 Tulp3-205ENSMUST00000157005 1053 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Ccdc85aQ5SP85 Gm28577-201ENSMUST00000176106 741 ntTSL 5 BASIC19.13■□□□□ 0.65
Ccdc85aQ5SP85 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Ccdc85aQ5SP85 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Ccdc85aQ5SP85 Dnajb2-208ENSMUST00000188346 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Ccdc85aQ5SP85 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC19.13■□□□□ 0.65
Ccdc85aQ5SP85 Gm43545-201ENSMUST00000196765 2779 ntBASIC19.12■□□□□ 0.65
Ccdc85aQ5SP85 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
Ccdc85aQ5SP85 Spg21-202ENSMUST00000213957 1302 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Ccdc85aQ5SP85 Echdc2-203ENSMUST00000116307 893 ntTSL 5 BASIC19.12■□□□□ 0.65
Ccdc85aQ5SP85 Gtf3c2-202ENSMUST00000200871 318 ntTSL 3 BASIC19.12■□□□□ 0.65
Ccdc85aQ5SP85 Gm35154-202ENSMUST00000217008 1093 ntTSL 5 BASIC19.12■□□□□ 0.65
Ccdc85aQ5SP85 Gm9857-201ENSMUST00000050914 393 ntAPPRIS P1 BASIC19.12■□□□□ 0.65
Ccdc85aQ5SP85 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Ccdc85aQ5SP85 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Ccdc85aQ5SP85 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Ccdc85aQ5SP85 Abhd13-201ENSMUST00000048216 5074 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Ccdc85aQ5SP85 Fam126a-202ENSMUST00000101513 1679 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Ccdc85aQ5SP85 Tnfrsf25-201ENSMUST00000025706 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Ccdc85aQ5SP85 Pla2g2c-201ENSMUST00000030530 1618 ntAPPRIS P1 TSL 3 BASIC19.11■□□□□ 0.65
Ccdc85aQ5SP85 Pou2f2-202ENSMUST00000108413 1599 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Ccdc85aQ5SP85 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC19.11■□□□□ 0.65
Ccdc85aQ5SP85 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Ccdc85aQ5SP85 Idh1-201ENSMUST00000097709 2302 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Ccdc85aQ5SP85 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Ccdc85aQ5SP85 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Ccdc85aQ5SP85 Slbp-205ENSMUST00000139518 1191 ntAPPRIS ALT2 TSL 2 BASIC19.11■□□□□ 0.65
Ccdc85aQ5SP85 Gm26887-201ENSMUST00000181282 547 ntTSL 5 BASIC19.11■□□□□ 0.65
Ccdc85aQ5SP85 Mir8098-201ENSMUST00000184011 137 ntBASIC19.11■□□□□ 0.65
Ccdc85aQ5SP85 Ankrd23-204ENSMUST00000194853 1073 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Ccdc85aQ5SP85 Gm38948-201ENSMUST00000210035 688 ntTSL 3 BASIC19.11■□□□□ 0.65
Ccdc85aQ5SP85 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC19.11■□□□□ 0.65
Ccdc85aQ5SP85 AC122351.1-201ENSMUST00000220467 126 ntBASIC19.11■□□□□ 0.65
Ccdc85aQ5SP85 Cldn19-201ENSMUST00000084309 924 ntAPPRIS P4 TSL 1 (best) BASIC19.11■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 34.1 ms