Protein–RNA interactions for Protein: Q4FZF3

Ddx49, Probable ATP-dependent RNA helicase DDX49, mousemouse

Known RBP Predictions only

Length 480 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx49Q4FZF3 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Ddx49Q4FZF3 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Ddx49Q4FZF3 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Ddx49Q4FZF3 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Ddx49Q4FZF3 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Ddx49Q4FZF3 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC20.15■□□□□ 0.82
Ddx49Q4FZF3 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.82
Ddx49Q4FZF3 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
Ddx49Q4FZF3 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
Ddx49Q4FZF3 Slc10a4-201ENSMUST00000031127 2106 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Ddx49Q4FZF3 Gm42922-201ENSMUST00000195887 2078 ntBASIC20.14■□□□□ 0.81
Ddx49Q4FZF3 Gm3488-202ENSMUST00000181562 1945 ntAPPRIS P5 TSL 5 BASIC20.14■□□□□ 0.81
Ddx49Q4FZF3 Tyk2-205ENSMUST00000214864 1662 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Ddx49Q4FZF3 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC20.14■□□□□ 0.81
Ddx49Q4FZF3 Rbm4-203ENSMUST00000178615 1018 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Ddx49Q4FZF3 Gm27742-201ENSMUST00000184667 60 ntBASIC20.14■□□□□ 0.81
Ddx49Q4FZF3 2010010A06Rik-202ENSMUST00000186356 694 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Ddx49Q4FZF3 Jagn1-202ENSMUST00000204254 1147 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Ddx49Q4FZF3 Gm29791-202ENSMUST00000207888 369 ntBASIC20.14■□□□□ 0.81
Ddx49Q4FZF3 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Ddx49Q4FZF3 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC20.14■□□□□ 0.81
Ddx49Q4FZF3 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC20.14■□□□□ 0.81
Ddx49Q4FZF3 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC20.14■□□□□ 0.81
Ddx49Q4FZF3 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Ddx49Q4FZF3 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Ddx49Q4FZF3 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Ddx49Q4FZF3 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC20.13■□□□□ 0.81
Ddx49Q4FZF3 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Ddx49Q4FZF3 Creld1-201ENSMUST00000032422 2306 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Ddx49Q4FZF3 Dapk1-207ENSMUST00000226059 5009 ntBASIC20.13■□□□□ 0.81
Ddx49Q4FZF3 Gm18115-201ENSMUST00000221209 621 ntBASIC20.13■□□□□ 0.81
Ddx49Q4FZF3 Mzt1-203ENSMUST00000227948 952 ntBASIC20.13■□□□□ 0.81
Ddx49Q4FZF3 Iscu-201ENSMUST00000026937 957 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Ddx49Q4FZF3 Cebpg-201ENSMUST00000070191 914 ntAPPRIS P1 TSL 2 BASIC20.13■□□□□ 0.81
Ddx49Q4FZF3 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Ddx49Q4FZF3 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Ddx49Q4FZF3 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Ddx49Q4FZF3 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC20.13■□□□□ 0.81
Ddx49Q4FZF3 A930029G22Rik-201ENSMUST00000181032 1710 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Ddx49Q4FZF3 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Ddx49Q4FZF3 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
Ddx49Q4FZF3 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Ddx49Q4FZF3 Grk6-206ENSMUST00000224995 2971 ntBASIC20.13■□□□□ 0.81
Ddx49Q4FZF3 4930471E19Rik-201ENSMUST00000219022 1514 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Ddx49Q4FZF3 Gm7856-201ENSMUST00000117514 1493 ntBASIC20.12■□□□□ 0.81
Ddx49Q4FZF3 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC20.12■□□□□ 0.81
Ddx49Q4FZF3 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Ddx49Q4FZF3 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC20.12■□□□□ 0.81
Ddx49Q4FZF3 Gm15890-201ENSMUST00000161024 770 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Ddx49Q4FZF3 Gm6623-201ENSMUST00000173570 544 ntBASIC20.12■□□□□ 0.81
Ddx49Q4FZF3 Faap20-210ENSMUST00000178473 1076 ntAPPRIS P3 TSL 1 (best) BASIC20.12■□□□□ 0.81
Ddx49Q4FZF3 Gm8797-201ENSMUST00000192045 490 ntAPPRIS P1 BASIC20.12■□□□□ 0.81
Ddx49Q4FZF3 Fam213b-201ENSMUST00000030935 883 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Ddx49Q4FZF3 Exosc5-201ENSMUST00000079634 1020 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Ddx49Q4FZF3 Spr-ps1-201ENSMUST00000089584 605 ntBASIC20.12■□□□□ 0.81
Ddx49Q4FZF3 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Ddx49Q4FZF3 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC20.12■□□□□ 0.81
Ddx49Q4FZF3 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
Ddx49Q4FZF3 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Ddx49Q4FZF3 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
Ddx49Q4FZF3 Golga7-202ENSMUST00000121783 1945 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Ddx49Q4FZF3 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Ddx49Q4FZF3 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC20.11■□□□□ 0.81
Ddx49Q4FZF3 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Ddx49Q4FZF3 Kcnk4-201ENSMUST00000025908 1715 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Ddx49Q4FZF3 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Ddx49Q4FZF3 Fam43b-201ENSMUST00000105032 2437 ntAPPRIS P1 BASIC20.11■□□□□ 0.81
Ddx49Q4FZF3 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Ddx49Q4FZF3 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC20.11■□□□□ 0.81
Ddx49Q4FZF3 Prkcz-203ENSMUST00000105624 694 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Ddx49Q4FZF3 Gm11860-201ENSMUST00000122346 1010 ntBASIC20.11■□□□□ 0.81
Ddx49Q4FZF3 Gm14964-202ENSMUST00000149574 716 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Ddx49Q4FZF3 Gm2431-201ENSMUST00000171531 519 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
Ddx49Q4FZF3 Gm17949-201ENSMUST00000210548 1179 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
Ddx49Q4FZF3 4933427E11Rik-201ENSMUST00000056711 1214 ntBASIC20.11■□□□□ 0.81
Ddx49Q4FZF3 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Ddx49Q4FZF3 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Ddx49Q4FZF3 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Ddx49Q4FZF3 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Ddx49Q4FZF3 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
Ddx49Q4FZF3 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Ddx49Q4FZF3 Trim54-202ENSMUST00000202769 1408 ntAPPRIS ALT1 TSL 5 BASIC20.1■□□□□ 0.81
Ddx49Q4FZF3 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Ddx49Q4FZF3 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Ddx49Q4FZF3 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Ddx49Q4FZF3 Hspb6-201ENSMUST00000044048 1363 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Ddx49Q4FZF3 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC20.1■□□□□ 0.81
Ddx49Q4FZF3 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Ddx49Q4FZF3 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC20.1■□□□□ 0.81
Ddx49Q4FZF3 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Ddx49Q4FZF3 Wbp2-202ENSMUST00000106444 1012 ntTSL 2 BASIC20.1■□□□□ 0.81
Ddx49Q4FZF3 Gm44924-201ENSMUST00000138087 421 ntTSL 3 BASIC20.1■□□□□ 0.81
Ddx49Q4FZF3 Smim1-210ENSMUST00000146054 707 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Ddx49Q4FZF3 Rpl14-201ENSMUST00000165532 1009 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Ddx49Q4FZF3 Imp3-201ENSMUST00000034827 924 ntAPPRIS P1 BASIC20.1■□□□□ 0.81
Ddx49Q4FZF3 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Ddx49Q4FZF3 Nfs1-201ENSMUST00000029147 2051 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Ddx49Q4FZF3 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Ddx49Q4FZF3 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
Ddx49Q4FZF3 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Retrieved 100 of 76,532 protein–RNA pairs in 33.4 ms