Protein–RNA interactions for Protein: Q3UTQ8

Cdkl5, Cyclin-dependent kinase-like 5, mousemouse

Predictions only

Length 938 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdkl5Q3UTQ8 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Cdkl5Q3UTQ8 Nudt22-203ENSMUST00000180765 1073 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.81
Cdkl5Q3UTQ8 Inpp4a-201ENSMUST00000027287 5691 ntAPPRIS P2 TSL 5 BASIC20.14■□□□□ 0.81
Cdkl5Q3UTQ8 Ust-201ENSMUST00000061601 4228 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Cdkl5Q3UTQ8 Gm19721-201ENSMUST00000195284 1764 ntBASIC20.13■□□□□ 0.81
Cdkl5Q3UTQ8 Ilk-212ENSMUST00000163389 1749 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Cdkl5Q3UTQ8 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC20.13■□□□□ 0.81
Cdkl5Q3UTQ8 Icam2-201ENSMUST00000001055 1282 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Cdkl5Q3UTQ8 Zfp467-209ENSMUST00000114566 543 ntTSL 3 BASIC20.13■□□□□ 0.81
Cdkl5Q3UTQ8 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Cdkl5Q3UTQ8 Smim1-212ENSMUST00000146543 839 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Cdkl5Q3UTQ8 Mrpl13-205ENSMUST00000172387 1223 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Cdkl5Q3UTQ8 Gm8520-201ENSMUST00000186517 868 ntBASIC20.13■□□□□ 0.81
Cdkl5Q3UTQ8 Gm10517-202ENSMUST00000192970 758 ntBASIC20.13■□□□□ 0.81
Cdkl5Q3UTQ8 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC20.13■□□□□ 0.81
Cdkl5Q3UTQ8 Slc25a31-201ENSMUST00000091184 2128 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Cdkl5Q3UTQ8 Il17re-203ENSMUST00000101065 1973 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Cdkl5Q3UTQ8 Map3k7-202ENSMUST00000080933 5669 ntAPPRIS P3 TSL 1 (best) BASIC20.13■□□□□ 0.81
Cdkl5Q3UTQ8 Tmem125-201ENSMUST00000060214 1864 ntAPPRIS P1 TSL 2 BASIC20.13■□□□□ 0.81
Cdkl5Q3UTQ8 Rbpms-213ENSMUST00000191473 2547 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Cdkl5Q3UTQ8 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Cdkl5Q3UTQ8 Tmem198-201ENSMUST00000050899 2456 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Cdkl5Q3UTQ8 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Cdkl5Q3UTQ8 Pitpnm2-210ENSMUST00000162812 6952 ntAPPRIS P3 TSL 1 (best) BASIC20.13■□□□□ 0.81
Cdkl5Q3UTQ8 Xxylt1-201ENSMUST00000055389 2987 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Cdkl5Q3UTQ8 Gm37519-201ENSMUST00000191687 2210 ntBASIC20.12■□□□□ 0.81
Cdkl5Q3UTQ8 Fbxl15-201ENSMUST00000026256 1348 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Cdkl5Q3UTQ8 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC20.12■□□□□ 0.81
Cdkl5Q3UTQ8 C030014I23Rik-201ENSMUST00000080911 1810 ntBASIC20.12■□□□□ 0.81
Cdkl5Q3UTQ8 Prss16-204ENSMUST00000150547 1159 ntTSL 3 BASIC20.12■□□□□ 0.81
Cdkl5Q3UTQ8 Creb1-207ENSMUST00000187811 1255 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Cdkl5Q3UTQ8 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC20.12■□□□□ 0.81
Cdkl5Q3UTQ8 Ctdsp2-202ENSMUST00000105256 4817 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Cdkl5Q3UTQ8 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Cdkl5Q3UTQ8 Snrnp48-201ENSMUST00000091641 1785 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Cdkl5Q3UTQ8 Pard3-209ENSMUST00000160272 5815 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Cdkl5Q3UTQ8 Rasl10b-202ENSMUST00000108140 3156 ntAPPRIS P1 TSL 2 BASIC20.12■□□□□ 0.81
Cdkl5Q3UTQ8 Nfs1-201ENSMUST00000029147 2051 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Cdkl5Q3UTQ8 Gne-202ENSMUST00000102936 2920 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Cdkl5Q3UTQ8 Il1rn-201ENSMUST00000114482 1986 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Cdkl5Q3UTQ8 Mfsd10-202ENSMUST00000114329 1906 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Cdkl5Q3UTQ8 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Cdkl5Q3UTQ8 Klhdc8a-201ENSMUST00000046071 4269 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Cdkl5Q3UTQ8 Matn4-202ENSMUST00000103104 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Cdkl5Q3UTQ8 B3gnt9-202ENSMUST00000136822 2516 ntAPPRIS P1 BASIC20.11■□□□□ 0.81
Cdkl5Q3UTQ8 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Cdkl5Q3UTQ8 Apaf1-208ENSMUST00000162618 5151 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
Cdkl5Q3UTQ8 CT010444.2-201ENSMUST00000217877 1629 ntBASIC20.11■□□□□ 0.81
Cdkl5Q3UTQ8 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Cdkl5Q3UTQ8 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC20.11■□□□□ 0.81
Cdkl5Q3UTQ8 Tm7sf2-202ENSMUST00000113543 1498 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Cdkl5Q3UTQ8 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Cdkl5Q3UTQ8 Tmem94-202ENSMUST00000103033 5238 ntAPPRIS P2 TSL 2 BASIC20.1■□□□□ 0.81
Cdkl5Q3UTQ8 Igdcc4-205ENSMUST00000213533 6220 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
Cdkl5Q3UTQ8 Igdcc4-201ENSMUST00000035499 6223 ntAPPRIS P2 TSL 1 (best) BASIC20.1■□□□□ 0.81
Cdkl5Q3UTQ8 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Cdkl5Q3UTQ8 Psmd4-202ENSMUST00000107237 1332 ntAPPRIS P3 TSL 1 (best) BASIC20.1■□□□□ 0.81
Cdkl5Q3UTQ8 Mettl4-ps1-202ENSMUST00000130218 1323 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Cdkl5Q3UTQ8 Gm34933-201ENSMUST00000203245 1067 ntTSL 5 BASIC20.1■□□□□ 0.81
Cdkl5Q3UTQ8 Uqcr11-201ENSMUST00000020372 445 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Cdkl5Q3UTQ8 Enpp1-202ENSMUST00000105520 6777 ntAPPRIS P3 TSL 1 (best) BASIC20.1■□□□□ 0.81
Cdkl5Q3UTQ8 Snx21-201ENSMUST00000056181 2590 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Cdkl5Q3UTQ8 Nfib-206ENSMUST00000107248 3294 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Cdkl5Q3UTQ8 Raver2-201ENSMUST00000038463 4045 ntAPPRIS P2 TSL 1 (best) BASIC20.1■□□□□ 0.81
Cdkl5Q3UTQ8 Ipo9-201ENSMUST00000041023 6247 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Cdkl5Q3UTQ8 8030462N17Rik-201ENSMUST00000074653 3418 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Cdkl5Q3UTQ8 Tdh-201ENSMUST00000022522 1881 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Cdkl5Q3UTQ8 Prss12-201ENSMUST00000029603 2602 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Cdkl5Q3UTQ8 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC20.09■□□□□ 0.81
Cdkl5Q3UTQ8 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC20.09■□□□□ 0.81
Cdkl5Q3UTQ8 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC20.09■□□□□ 0.81
Cdkl5Q3UTQ8 Rab6b-201ENSMUST00000035155 5007 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Cdkl5Q3UTQ8 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC20.09■□□□□ 0.81
Cdkl5Q3UTQ8 Atp5g1-203ENSMUST00000107686 691 ntAPPRIS P1 TSL 3 BASIC20.09■□□□□ 0.81
Cdkl5Q3UTQ8 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC20.09■□□□□ 0.81
Cdkl5Q3UTQ8 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC20.09■□□□□ 0.81
Cdkl5Q3UTQ8 Grina-201ENSMUST00000023225 1693 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Cdkl5Q3UTQ8 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC20.09■□□□□ 0.81
Cdkl5Q3UTQ8 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
Cdkl5Q3UTQ8 Tnrc6c-202ENSMUST00000106344 8847 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.81
Cdkl5Q3UTQ8 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Cdkl5Q3UTQ8 Anapc13-204ENSMUST00000190279 589 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Cdkl5Q3UTQ8 Gm9694-201ENSMUST00000193347 1189 ntBASIC20.08■□□□□ 0.81
Cdkl5Q3UTQ8 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
Cdkl5Q3UTQ8 Mroh5-201ENSMUST00000071419 2766 ntAPPRIS P2 TSL 1 (best) BASIC20.08■□□□□ 0.8
Cdkl5Q3UTQ8 Rbbp7-202ENSMUST00000112326 1430 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
Cdkl5Q3UTQ8 Jmy-201ENSMUST00000065537 8776 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Cdkl5Q3UTQ8 Apba3-201ENSMUST00000057798 2106 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Cdkl5Q3UTQ8 Kif7-202ENSMUST00000178048 4524 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.8
Cdkl5Q3UTQ8 Cisd2-202ENSMUST00000120988 1363 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
Cdkl5Q3UTQ8 Rev1-201ENSMUST00000027251 4262 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Cdkl5Q3UTQ8 Gprc5c-203ENSMUST00000122967 1709 ntTSL 5 BASIC20.07■□□□□ 0.8
Cdkl5Q3UTQ8 Prps1l3-201ENSMUST00000139049 1720 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Cdkl5Q3UTQ8 Ppm1j-201ENSMUST00000002298 1721 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Cdkl5Q3UTQ8 Ostm1-201ENSMUST00000040718 3006 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Cdkl5Q3UTQ8 Ankrd63-201ENSMUST00000104937 4861 ntAPPRIS P1 BASIC20.07■□□□□ 0.8
Cdkl5Q3UTQ8 Zfp467-208ENSMUST00000114564 626 ntTSL 2 BASIC20.07■□□□□ 0.8
Cdkl5Q3UTQ8 Gm21863-201ENSMUST00000179133 336 ntAPPRIS P1 BASIC20.07■□□□□ 0.8
Cdkl5Q3UTQ8 E030044B06Rik-201ENSMUST00000181195 1266 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Cdkl5Q3UTQ8 Ubac2-201ENSMUST00000039803 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Retrieved 100 of 76,532 protein–RNA pairs in 22.5 ms