Protein–RNA interactions for Protein: Q3US17

Znf48, Zinc finger protein 48, mousemouse

Predictions only

Length 591 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Znf48Q3US17 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Znf48Q3US17 2200002D01Rik-201ENSMUST00000032808 1466 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Znf48Q3US17 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
Znf48Q3US17 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Znf48Q3US17 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
Znf48Q3US17 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
Znf48Q3US17 Ramp2-202ENSMUST00000122006 899 ntTSL 2 BASIC14.33□□□□□ -0.12
Znf48Q3US17 Gm10549-201ENSMUST00000097634 450 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
Znf48Q3US17 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Znf48Q3US17 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
Znf48Q3US17 Rab6a-202ENSMUST00000098252 3110 ntAPPRIS ALT1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Znf48Q3US17 Espn-208ENSMUST00000105654 1566 ntTSL 5 BASIC14.33□□□□□ -0.12
Znf48Q3US17 Igf2-205ENSMUST00000121128 4722 ntTSL 2 BASIC14.33□□□□□ -0.12
Znf48Q3US17 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Znf48Q3US17 Gm15635-204ENSMUST00000208024 2539 ntBASIC14.33□□□□□ -0.12
Znf48Q3US17 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Znf48Q3US17 Wnt4-201ENSMUST00000045747 4194 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Znf48Q3US17 Ostm1-201ENSMUST00000040718 3006 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Znf48Q3US17 Ttc6-203ENSMUST00000172939 5782 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Znf48Q3US17 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Znf48Q3US17 Lpin2-213ENSMUST00000156570 1586 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Znf48Q3US17 Sgsm2-201ENSMUST00000057631 4743 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Znf48Q3US17 Clta-203ENSMUST00000107847 1121 ntTSL 5 BASIC14.32□□□□□ -0.12
Znf48Q3US17 Fev-202ENSMUST00000159232 928 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Znf48Q3US17 Cox7a2l-202ENSMUST00000167741 1147 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Znf48Q3US17 Calml4-206ENSMUST00000215870 803 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Znf48Q3US17 Eif3h-201ENSMUST00000022925 1295 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Znf48Q3US17 Exosc3-201ENSMUST00000030003 1077 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Znf48Q3US17 Bax-201ENSMUST00000033093 867 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Znf48Q3US17 Gm7367-201ENSMUST00000057611 492 ntBASIC14.32□□□□□ -0.12
Znf48Q3US17 Kctd12-202ENSMUST00000184744 6057 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
Znf48Q3US17 Pcsk5-202ENSMUST00000050715 5783 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Znf48Q3US17 Gnao1-201ENSMUST00000034198 2948 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Znf48Q3US17 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Znf48Q3US17 Vkorc1l1-203ENSMUST00000201855 4809 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Znf48Q3US17 Gm43672-201ENSMUST00000199072 1731 ntBASIC14.32□□□□□ -0.12
Znf48Q3US17 Eif4g3-205ENSMUST00000105831 6235 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Znf48Q3US17 Msx2-201ENSMUST00000021922 2453 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Znf48Q3US17 Etnk1-201ENSMUST00000032413 6433 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Znf48Q3US17 Mief1-203ENSMUST00000228788 5352 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
Znf48Q3US17 Stum-201ENSMUST00000136521 6506 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Znf48Q3US17 Fam222a-201ENSMUST00000043650 2930 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Znf48Q3US17 Gm9885-202ENSMUST00000186234 2209 ntBASIC14.31□□□□□ -0.12
Znf48Q3US17 K230015D01Rik-201ENSMUST00000211969 1516 ntBASIC14.31□□□□□ -0.12
Znf48Q3US17 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Znf48Q3US17 Lrch4-201ENSMUST00000031734 3078 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
Znf48Q3US17 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Znf48Q3US17 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Znf48Q3US17 Gm5898-201ENSMUST00000121016 2071 ntBASIC14.31□□□□□ -0.12
Znf48Q3US17 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Znf48Q3US17 Cadm3-201ENSMUST00000005470 2518 ntTSL 5 BASIC14.31□□□□□ -0.12
Znf48Q3US17 Cacna1b-204ENSMUST00000102939 9736 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
Znf48Q3US17 Ccnd3-ps-201ENSMUST00000117963 881 ntBASIC14.31□□□□□ -0.12
Znf48Q3US17 2210408F21Rik-208ENSMUST00000144612 450 ntTSL 3 BASIC14.31□□□□□ -0.12
Znf48Q3US17 Ano10-206ENSMUST00000216670 2108 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Znf48Q3US17 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Znf48Q3US17 Yif1b-201ENSMUST00000032809 1111 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
Znf48Q3US17 Ewsr1-204ENSMUST00000093365 1290 ntTSL 5 BASIC14.31□□□□□ -0.12
Znf48Q3US17 Ank1-209ENSMUST00000121802 8218 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Znf48Q3US17 Hps4-201ENSMUST00000035279 2836 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Znf48Q3US17 Aqp2-201ENSMUST00000023752 1416 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Znf48Q3US17 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Znf48Q3US17 Plekha7-210ENSMUST00000182834 5257 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Znf48Q3US17 Slc25a26-201ENSMUST00000061118 1922 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Znf48Q3US17 Ank1-203ENSMUST00000110688 7206 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Znf48Q3US17 Galnt16-204ENSMUST00000218943 2047 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Znf48Q3US17 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Znf48Q3US17 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Znf48Q3US17 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Znf48Q3US17 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Znf48Q3US17 Stam-202ENSMUST00000102960 5000 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Znf48Q3US17 Znhit1-203ENSMUST00000111090 698 ntTSL 2 BASIC14.3□□□□□ -0.12
Znf48Q3US17 2210408F21Rik-211ENSMUST00000151800 750 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Znf48Q3US17 Hsbp1-201ENSMUST00000034300 1208 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Znf48Q3US17 Ina-201ENSMUST00000037636 3240 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Znf48Q3US17 Ppm1b-202ENSMUST00000112304 3262 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
Znf48Q3US17 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Znf48Q3US17 Bmpr1b-203ENSMUST00000106230 2147 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Znf48Q3US17 Vstm2b-203ENSMUST00000205845 1455 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Znf48Q3US17 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Znf48Q3US17 Usp32-202ENSMUST00000108075 7053 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
Znf48Q3US17 Celf6-204ENSMUST00000121266 2610 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Znf48Q3US17 Cep135-202ENSMUST00000121979 5537 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Znf48Q3US17 Sdk1-202ENSMUST00000085774 10352 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Znf48Q3US17 Gm16201-202ENSMUST00000139218 2330 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Znf48Q3US17 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Znf48Q3US17 Rint1-204ENSMUST00000117783 560 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Znf48Q3US17 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC14.29□□□□□ -0.12
Znf48Q3US17 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Znf48Q3US17 Gm10459-201ENSMUST00000202708 1155 ntBASIC14.29□□□□□ -0.12
Znf48Q3US17 Metrn-201ENSMUST00000002344 987 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Znf48Q3US17 Nfu1-201ENSMUST00000032060 948 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Znf48Q3US17 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Znf48Q3US17 Npw-201ENSMUST00000095544 638 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Znf48Q3US17 Zpbp-201ENSMUST00000020413 4248 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Znf48Q3US17 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC14.29□□□□□ -0.12
Znf48Q3US17 Ptprs-201ENSMUST00000067538 6855 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Znf48Q3US17 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
Znf48Q3US17 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Znf48Q3US17 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 35.7 ms