Protein–RNA interactions for Protein: Q08423

Tff1, Trefoil factor 1, mousemouse

Predictions only

Length 87 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tff1Q08423 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Tff1Q08423 Appl2-201ENSMUST00000020500 3020 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Tff1Q08423 Eml1-203ENSMUST00000109860 4160 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Tff1Q08423 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Tff1Q08423 Gm37519-201ENSMUST00000191687 2210 ntBASIC14.43□□□□□ -0.1
Tff1Q08423 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Tff1Q08423 Gm26674-201ENSMUST00000180770 1446 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Tff1Q08423 Acp5-204ENSMUST00000213815 1419 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
Tff1Q08423 Acp5-206ENSMUST00000217643 1447 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
Tff1Q08423 Fam171b-201ENSMUST00000051454 5614 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Tff1Q08423 Acadvl-201ENSMUST00000018718 2020 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
Tff1Q08423 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC14.43□□□□□ -0.1
Tff1Q08423 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Tff1Q08423 Zfp467-209ENSMUST00000114566 543 ntTSL 3 BASIC14.43□□□□□ -0.1
Tff1Q08423 Tmed5-204ENSMUST00000118036 1045 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Tff1Q08423 Gm29241-201ENSMUST00000189260 1096 ntBASIC14.43□□□□□ -0.1
Tff1Q08423 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC14.43□□□□□ -0.1
Tff1Q08423 Ckm-201ENSMUST00000003643 1235 ntTSL 5 BASIC14.43□□□□□ -0.1
Tff1Q08423 Apba3-201ENSMUST00000057798 2106 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Tff1Q08423 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Tff1Q08423 Ints8-202ENSMUST00000108318 3169 ntTSL 5 BASIC14.43□□□□□ -0.1
Tff1Q08423 Mag-201ENSMUST00000040548 2419 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Tff1Q08423 Rasa2-201ENSMUST00000034984 5813 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Tff1Q08423 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Tff1Q08423 Meox1-201ENSMUST00000057054 2228 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Tff1Q08423 Xpr1-202ENSMUST00000111774 2753 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Tff1Q08423 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC14.42□□□□□ -0.1
Tff1Q08423 Ric1-201ENSMUST00000043610 7190 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
Tff1Q08423 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Tff1Q08423 Gm13836-201ENSMUST00000121159 501 ntBASIC14.42□□□□□ -0.1
Tff1Q08423 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Tff1Q08423 Pantr1-210ENSMUST00000185599 343 ntTSL 3 BASIC14.42□□□□□ -0.1
Tff1Q08423 Rsu1-209ENSMUST00000191959 720 ntTSL 3 BASIC14.42□□□□□ -0.1
Tff1Q08423 Wdr33-202ENSMUST00000082319 1152 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Tff1Q08423 Pdap1-201ENSMUST00000031627 2353 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Tff1Q08423 Rab6b-201ENSMUST00000035155 5007 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Tff1Q08423 Tex264-203ENSMUST00000169068 1364 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Tff1Q08423 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
Tff1Q08423 Isca1-201ENSMUST00000057115 1942 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Tff1Q08423 Tmed4-201ENSMUST00000004508 2003 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Tff1Q08423 Lrrc7-201ENSMUST00000106044 5918 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
Tff1Q08423 Camsap2-203ENSMUST00000192314 4916 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Tff1Q08423 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC14.42□□□□□ -0.1
Tff1Q08423 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC14.42□□□□□ -0.1
Tff1Q08423 Etv6-201ENSMUST00000081028 5545 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
Tff1Q08423 Chst2-201ENSMUST00000036267 7328 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Tff1Q08423 Ncoa1-201ENSMUST00000085814 7329 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Tff1Q08423 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Tff1Q08423 Gpr137-202ENSMUST00000099774 1434 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Tff1Q08423 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Tff1Q08423 Isyna1-201ENSMUST00000019283 1836 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Tff1Q08423 Elk4-202ENSMUST00000086556 4433 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Tff1Q08423 Fbrsl1-202ENSMUST00000069483 4720 ntAPPRIS P2 TSL 5 BASIC14.41□□□□□ -0.1
Tff1Q08423 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Tff1Q08423 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Tff1Q08423 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Tff1Q08423 Piezo2-201ENSMUST00000046860 2849 ntTSL 5 BASIC14.41□□□□□ -0.1
Tff1Q08423 Synpo-201ENSMUST00000097566 5060 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
Tff1Q08423 Bsg-202ENSMUST00000105381 1240 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Tff1Q08423 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Tff1Q08423 Cmc1-202ENSMUST00000215799 531 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Tff1Q08423 Smim15-206ENSMUST00000226042 1092 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
Tff1Q08423 Akip1-201ENSMUST00000033335 1028 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Tff1Q08423 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC14.41□□□□□ -0.1
Tff1Q08423 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Tff1Q08423 Arhgef16-201ENSMUST00000030898 2860 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Tff1Q08423 A530084C06Rik-201ENSMUST00000170573 3200 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
Tff1Q08423 Nsmf-201ENSMUST00000006646 2922 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
Tff1Q08423 Scly-201ENSMUST00000027532 2202 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Tff1Q08423 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Tff1Q08423 Gm37563-201ENSMUST00000192580 1513 ntBASIC14.41□□□□□ -0.1
Tff1Q08423 Ppp1r36-201ENSMUST00000063977 1515 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
Tff1Q08423 Itsn1-203ENSMUST00000095909 6103 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Tff1Q08423 Zfp710-201ENSMUST00000049680 4721 ntAPPRIS P4 TSL 1 (best) BASIC14.4□□□□□ -0.1
Tff1Q08423 Btbd10-203ENSMUST00000119278 2394 ntTSL 5 BASIC14.4□□□□□ -0.1
Tff1Q08423 Cux1-206ENSMUST00000176172 4882 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Tff1Q08423 Fmr1-205ENSMUST00000114656 4257 ntTSL 5 BASIC14.4□□□□□ -0.1
Tff1Q08423 Adam15-203ENSMUST00000107446 1686 ntTSL 5 BASIC14.4□□□□□ -0.1
Tff1Q08423 Shroom4-202ENSMUST00000103005 4839 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Tff1Q08423 Xiap-203ENSMUST00000115094 6542 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
Tff1Q08423 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Tff1Q08423 Cck-201ENSMUST00000035120 691 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Tff1Q08423 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
Tff1Q08423 Txnl1-201ENSMUST00000025476 2558 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Tff1Q08423 Kdm5b-203ENSMUST00000112198 5413 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Tff1Q08423 Acbd4-201ENSMUST00000024492 2075 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
Tff1Q08423 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Tff1Q08423 Atg4c-201ENSMUST00000030279 3178 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Tff1Q08423 Tekt1-201ENSMUST00000021155 1447 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Tff1Q08423 Lonp1-201ENSMUST00000047226 2963 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Tff1Q08423 St7l-202ENSMUST00000106769 2428 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Tff1Q08423 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Tff1Q08423 Ripor2-202ENSMUST00000058009 2550 ntAPPRIS ALT2 TSL 2 BASIC14.39□□□□□ -0.11
Tff1Q08423 Rbm33-204ENSMUST00000114884 6256 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
Tff1Q08423 Agxt-201ENSMUST00000027491 1553 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Tff1Q08423 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
Tff1Q08423 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC14.39□□□□□ -0.11
Tff1Q08423 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC14.39□□□□□ -0.11
Tff1Q08423 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC14.39□□□□□ -0.11
Tff1Q08423 Gabarap-201ENSMUST00000018711 1351 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 20.3 ms