Protein–RNA interactions for Protein: P97313

Prkdc, DNA-dependent protein kinase catalytic subunit, mousemouse

Predictions only

Length 4,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PrkdcP97313 Fbxo17-205ENSMUST00000167118 861 ntAPPRIS P1 TSL 5 BASIC11.95□□□□□ -0.5
PrkdcP97313 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
PrkdcP97313 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC11.95□□□□□ -0.5
PrkdcP97313 A330070K13Rik-201ENSMUST00000063656 633 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
PrkdcP97313 Gm38308-201ENSMUST00000194934 1809 ntBASIC11.95□□□□□ -0.5
PrkdcP97313 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
PrkdcP97313 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
PrkdcP97313 Cyp2w1-201ENSMUST00000031521 1512 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
PrkdcP97313 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.5
PrkdcP97313 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
PrkdcP97313 Gm13830-205ENSMUST00000201195 1155 ntBASIC11.94□□□□□ -0.5
PrkdcP97313 Gm45144-201ENSMUST00000207473 354 ntTSL 5 BASIC11.94□□□□□ -0.5
PrkdcP97313 Aurkaip1-201ENSMUST00000084097 1159 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
PrkdcP97313 Mef2b-203ENSMUST00000110143 1312 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
PrkdcP97313 Mef2b-204ENSMUST00000110146 1342 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.5
PrkdcP97313 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
PrkdcP97313 Fam126a-202ENSMUST00000101513 1679 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
PrkdcP97313 Gm45890-204ENSMUST00000212356 545 ntTSL 2 BASIC11.94□□□□□ -0.5
PrkdcP97313 Prdx4-201ENSMUST00000026328 990 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
PrkdcP97313 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.5
PrkdcP97313 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
PrkdcP97313 Tpm1-215ENSMUST00000113705 1759 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
PrkdcP97313 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
PrkdcP97313 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
PrkdcP97313 Ndufs7-202ENSMUST00000105364 983 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
PrkdcP97313 Zscan10-204ENSMUST00000118369 1006 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
PrkdcP97313 Smim22-208ENSMUST00000185147 399 ntAPPRIS ALT2 TSL 2 BASIC11.94□□□□□ -0.5
PrkdcP97313 H2-Bl-211ENSMUST00000195838 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
PrkdcP97313 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
PrkdcP97313 Nt5c-202ENSMUST00000106530 836 ntTSL 3 BASIC11.93□□□□□ -0.5
PrkdcP97313 Tsfm-207ENSMUST00000152054 655 ntTSL 3 BASIC11.93□□□□□ -0.5
PrkdcP97313 Sytl3-204ENSMUST00000159880 1296 ntTSL 5 BASIC11.93□□□□□ -0.5
PrkdcP97313 Ighv1-15-201ENSMUST00000192077 351 ntAPPRIS P1 BASIC11.93□□□□□ -0.5
PrkdcP97313 Vamp8-201ENSMUST00000059983 820 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
PrkdcP97313 Cdkn2d-201ENSMUST00000086374 1264 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
PrkdcP97313 Skp1a-203ENSMUST00000109072 1754 ntAPPRIS P1 TSL 5 BASIC11.93□□□□□ -0.5
PrkdcP97313 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC11.93□□□□□ -0.5
PrkdcP97313 Helt-201ENSMUST00000058636 1541 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
PrkdcP97313 Sbsn-202ENSMUST00000182227 432 ntAPPRIS ALT2 TSL 5 BASIC11.93□□□□□ -0.5
PrkdcP97313 Sbsn-203ENSMUST00000182229 732 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
PrkdcP97313 AC084391.1-201ENSMUST00000200651 141 ntBASIC11.93□□□□□ -0.5
PrkdcP97313 Cplx3-202ENSMUST00000215487 594 ntTSL 3 BASIC11.93□□□□□ -0.5
PrkdcP97313 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
PrkdcP97313 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
PrkdcP97313 P2rx5-201ENSMUST00000006104 2395 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
PrkdcP97313 Dtx3-202ENSMUST00000116229 1994 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
PrkdcP97313 Slc26a10-201ENSMUST00000095270 2215 ntAPPRIS P2 TSL 5 BASIC11.93□□□□□ -0.5
PrkdcP97313 Plk3-201ENSMUST00000076859 2378 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
PrkdcP97313 2210408F21Rik-210ENSMUST00000151076 539 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
PrkdcP97313 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC11.93□□□□□ -0.5
PrkdcP97313 Tekt1-201ENSMUST00000021155 1447 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
PrkdcP97313 AC124603.1-201ENSMUST00000223843 308 ntBASIC11.93□□□□□ -0.5
PrkdcP97313 Nmu-201ENSMUST00000031146 828 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
PrkdcP97313 Mrpl17-201ENSMUST00000033170 1028 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
PrkdcP97313 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
PrkdcP97313 Msantd3-202ENSMUST00000064807 1378 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
PrkdcP97313 Chrm4-201ENSMUST00000045537 1440 ntAPPRIS P1 BASIC11.93□□□□□ -0.5
PrkdcP97313 Lce3f-201ENSMUST00000090863 611 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
PrkdcP97313 Irak1bp1-202ENSMUST00000113245 2158 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
PrkdcP97313 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
PrkdcP97313 Tgds-204ENSMUST00000228543 1594 ntBASIC11.92□□□□□ -0.5
PrkdcP97313 Gm12216-201ENSMUST00000117316 1152 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
PrkdcP97313 Triqk-201ENSMUST00000143186 888 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
PrkdcP97313 Mymx-202ENSMUST00000169137 616 ntAPPRIS P4 TSL 2 BASIC11.92□□□□□ -0.5
PrkdcP97313 Arfip1-202ENSMUST00000107687 1714 ntTSL 5 BASIC11.92□□□□□ -0.5
PrkdcP97313 Zmym3-204ENSMUST00000118092 1502 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
PrkdcP97313 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
PrkdcP97313 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
PrkdcP97313 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
PrkdcP97313 Mier2-212ENSMUST00000172158 1400 ntTSL 5 BASIC11.92□□□□□ -0.5
PrkdcP97313 Gdap1l1-203ENSMUST00000109421 1206 ntAPPRIS ALT1 TSL 1 (best) BASIC11.92□□□□□ -0.5
PrkdcP97313 Gm19345-201ENSMUST00000172815 993 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
PrkdcP97313 Acaa1a-203ENSMUST00000175743 1219 ntTSL 5 BASIC11.92□□□□□ -0.5
PrkdcP97313 Acaa1a-207ENSMUST00000176397 996 ntTSL 5 BASIC11.92□□□□□ -0.5
PrkdcP97313 Sgta-201ENSMUST00000005067 1969 ntAPPRIS P2 TSL 1 (best) BASIC11.92□□□□□ -0.5
PrkdcP97313 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
PrkdcP97313 Abcg5-202ENSMUST00000163375 1613 ntTSL 5 BASIC11.92□□□□□ -0.5
PrkdcP97313 Klhl33-201ENSMUST00000164415 1602 ntTSL 5 BASIC11.92□□□□□ -0.5
PrkdcP97313 Krt15-201ENSMUST00000107411 1700 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
PrkdcP97313 Gm26308-201ENSMUST00000157768 69 ntBASIC11.92□□□□□ -0.5
PrkdcP97313 Igflr1-201ENSMUST00000043850 1186 ntAPPRIS P2 TSL 1 (best) BASIC11.92□□□□□ -0.5
PrkdcP97313 Mrgpra9-201ENSMUST00000098436 1049 ntAPPRIS ALT2 TSL 5 BASIC11.92□□□□□ -0.5
PrkdcP97313 Gm3468-201ENSMUST00000165193 1955 ntAPPRIS P1 TSL 5 BASIC11.91□□□□□ -0.5
PrkdcP97313 Gm2956-201ENSMUST00000177786 1955 ntAPPRIS P1 TSL 5 BASIC11.91□□□□□ -0.5
PrkdcP97313 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
PrkdcP97313 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC11.91□□□□□ -0.5
PrkdcP97313 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
PrkdcP97313 E530001F21Rik-201ENSMUST00000120991 730 ntBASIC11.91□□□□□ -0.5
PrkdcP97313 Pdcd6-201ENSMUST00000022060 1131 ntAPPRIS P2 TSL 1 (best) BASIC11.91□□□□□ -0.5
PrkdcP97313 Cidea-201ENSMUST00000025404 1164 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
PrkdcP97313 Klk15-201ENSMUST00000068625 845 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
PrkdcP97313 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC11.91□□□□□ -0.5
PrkdcP97313 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
PrkdcP97313 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC11.91□□□□□ -0.5
PrkdcP97313 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC11.91□□□□□ -0.5
PrkdcP97313 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
PrkdcP97313 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
PrkdcP97313 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
PrkdcP97313 Prmt2-202ENSMUST00000099571 2052 ntAPPRIS P3 TSL 1 (best) BASIC11.91□□□□□ -0.5
PrkdcP97313 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 26.1 ms