Protein–RNA interactions for Protein: P68404

Prkcb, Protein kinase C beta type, mousemouse

Predictions only

Length 671 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PrkcbP68404 Cutc-202ENSMUST00000112047 1233 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
PrkcbP68404 1810062O18Rik-202ENSMUST00000128848 745 ntTSL 3 BASIC18.8■□□□□ 0.6
PrkcbP68404 Gm4217-201ENSMUST00000182243 1002 ntBASIC18.8■□□□□ 0.6
PrkcbP68404 4732471J01Rik-202ENSMUST00000205787 991 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
PrkcbP68404 Mrpl21-201ENSMUST00000025743 802 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
PrkcbP68404 Gng11-201ENSMUST00000031670 919 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
PrkcbP68404 Prok1-201ENSMUST00000049852 813 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
PrkcbP68404 Etv5-201ENSMUST00000079601 3975 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
PrkcbP68404 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
PrkcbP68404 Dnajb9-201ENSMUST00000015049 2461 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
PrkcbP68404 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
PrkcbP68404 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
PrkcbP68404 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PrkcbP68404 Mpdu1-201ENSMUST00000018905 1321 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PrkcbP68404 Aurkb-201ENSMUST00000021277 1950 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PrkcbP68404 Khdrbs2-201ENSMUST00000027226 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PrkcbP68404 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC18.79■□□□□ 0.6
PrkcbP68404 Carmn-201ENSMUST00000181155 1778 ntTSL 2 BASIC18.79■□□□□ 0.6
PrkcbP68404 Tmem80-202ENSMUST00000126510 959 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
PrkcbP68404 Gm3764-209ENSMUST00000181550 1093 ntTSL 3 BASIC18.79■□□□□ 0.6
PrkcbP68404 4930579K19Rik-202ENSMUST00000190541 632 ntTSL 2 BASIC18.79■□□□□ 0.6
PrkcbP68404 Rab28-205ENSMUST00000202913 863 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
PrkcbP68404 Rgcc-201ENSMUST00000022595 918 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PrkcbP68404 Osbpl1a-207ENSMUST00000121808 3030 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
PrkcbP68404 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC18.79■□□□□ 0.6
PrkcbP68404 Mff-202ENSMUST00000078332 1894 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PrkcbP68404 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
PrkcbP68404 Ncam2-202ENSMUST00000067602 3563 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
PrkcbP68404 Senp2-201ENSMUST00000023561 4499 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PrkcbP68404 Zdhhc6-201ENSMUST00000076891 2263 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PrkcbP68404 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PrkcbP68404 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC18.78■□□□□ 0.6
PrkcbP68404 Adat2-201ENSMUST00000019944 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
PrkcbP68404 Alg5-201ENSMUST00000044567 1471 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
PrkcbP68404 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC18.78■□□□□ 0.6
PrkcbP68404 Abhd13-201ENSMUST00000048216 5074 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
PrkcbP68404 Arhgap21-201ENSMUST00000114594 7351 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
PrkcbP68404 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
PrkcbP68404 Pdlim5-211ENSMUST00000198381 1555 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
PrkcbP68404 Tspan9-201ENSMUST00000032503 1405 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
PrkcbP68404 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
PrkcbP68404 Ptf1aos-201ENSMUST00000122978 916 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
PrkcbP68404 Gm16731-201ENSMUST00000132432 922 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
PrkcbP68404 Gm2274-201ENSMUST00000184539 609 ntBASIC18.78■□□□□ 0.6
PrkcbP68404 Gm18959-201ENSMUST00000208954 655 ntBASIC18.78■□□□□ 0.6
PrkcbP68404 Chmp2a-203ENSMUST00000210587 930 ntAPPRIS P1 TSL 3 BASIC18.78■□□□□ 0.6
PrkcbP68404 B4galt5-201ENSMUST00000109221 4210 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
PrkcbP68404 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
PrkcbP68404 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC18.78■□□□□ 0.6
PrkcbP68404 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
PrkcbP68404 Plac9a-201ENSMUST00000052286 1555 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
PrkcbP68404 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
PrkcbP68404 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
PrkcbP68404 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC18.77■□□□□ 0.6
PrkcbP68404 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
PrkcbP68404 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
PrkcbP68404 Gm17661-201ENSMUST00000170317 270 ntBASIC18.77■□□□□ 0.6
PrkcbP68404 Spata25-201ENSMUST00000017911 786 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
PrkcbP68404 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC18.77■□□□□ 0.6
PrkcbP68404 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
PrkcbP68404 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
PrkcbP68404 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
PrkcbP68404 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC18.77■□□□□ 0.59
PrkcbP68404 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
PrkcbP68404 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
PrkcbP68404 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
PrkcbP68404 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC18.76■□□□□ 0.59
PrkcbP68404 Slc25a3-201ENSMUST00000076694 1612 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
PrkcbP68404 Fam229a-201ENSMUST00000106043 558 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
PrkcbP68404 Pthlh-202ENSMUST00000204197 1281 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
PrkcbP68404 Gadd45b-203ENSMUST00000220246 732 ntTSL 2 BASIC18.76■□□□□ 0.59
PrkcbP68404 Il3ra-202ENSMUST00000223589 738 ntBASIC18.76■□□□□ 0.59
PrkcbP68404 Gas2-201ENSMUST00000051912 2181 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
PrkcbP68404 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
PrkcbP68404 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
PrkcbP68404 Tmed4-201ENSMUST00000004508 2003 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
PrkcbP68404 Atrnl1-201ENSMUST00000077282 6581 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
PrkcbP68404 A930029G22Rik-201ENSMUST00000181032 1710 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
PrkcbP68404 Pih1d2-201ENSMUST00000000171 1256 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
PrkcbP68404 BC048679-201ENSMUST00000073406 522 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
PrkcbP68404 3110070M22Rik-201ENSMUST00000099148 1123 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
PrkcbP68404 Rogdi-207ENSMUST00000202281 1355 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
PrkcbP68404 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
PrkcbP68404 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
PrkcbP68404 Fam98a-201ENSMUST00000112507 2817 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
PrkcbP68404 Snrnp48-201ENSMUST00000091641 1785 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
PrkcbP68404 Dut-201ENSMUST00000051605 1950 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
PrkcbP68404 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
PrkcbP68404 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
PrkcbP68404 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC18.75■□□□□ 0.59
PrkcbP68404 Mycbp-202ENSMUST00000106202 1536 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
PrkcbP68404 Gprc5c-203ENSMUST00000122967 1709 ntTSL 5 BASIC18.74■□□□□ 0.59
PrkcbP68404 Tmem47-203ENSMUST00000171953 1801 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
PrkcbP68404 Trp73-203ENSMUST00000105643 1916 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
PrkcbP68404 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
PrkcbP68404 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
PrkcbP68404 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC18.74■□□□□ 0.59
PrkcbP68404 4930405A21Rik-202ENSMUST00000139042 994 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
PrkcbP68404 AC120002.2-201ENSMUST00000220205 773 ntBASIC18.74■□□□□ 0.59
PrkcbP68404 Pigf-201ENSMUST00000024957 988 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 25.1 ms