Protein–RNA interactions for Protein: P62960

Ybx1, Nuclease-sensitive element-binding protein 1, mousemouse

Known RBP Predictions only

Length 322 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ybx1P62960 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Ybx1P62960 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC17.8■□□□□ 0.44
Ybx1P62960 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Ybx1P62960 Gm37374-201ENSMUST00000194954 1829 ntBASIC17.8■□□□□ 0.44
Ybx1P62960 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Ybx1P62960 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Ybx1P62960 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Ybx1P62960 AC159205.3-201ENSMUST00000224614 874 ntBASIC17.8■□□□□ 0.44
Ybx1P62960 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Ybx1P62960 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC17.8■□□□□ 0.44
Ybx1P62960 Gmcl1-201ENSMUST00000001185 2949 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Ybx1P62960 Snrpd2-201ENSMUST00000049294 1420 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Ybx1P62960 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC17.79■□□□□ 0.44
Ybx1P62960 Plpbp-202ENSMUST00000098851 1368 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Ybx1P62960 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Ybx1P62960 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
Ybx1P62960 Rnf208-202ENSMUST00000114355 1333 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
Ybx1P62960 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Ybx1P62960 Gm37811-201ENSMUST00000192416 2601 ntBASIC17.79■□□□□ 0.44
Ybx1P62960 Bud23-202ENSMUST00000085984 1516 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Ybx1P62960 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC17.79■□□□□ 0.44
Ybx1P62960 Laptm4b-201ENSMUST00000022867 1902 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Ybx1P62960 Krtap1-4-201ENSMUST00000100479 593 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
Ybx1P62960 Npb-202ENSMUST00000106194 530 ntAPPRIS ALT2 TSL 2 BASIC17.79■□□□□ 0.44
Ybx1P62960 Npb-203ENSMUST00000106195 542 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
Ybx1P62960 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC17.79■□□□□ 0.44
Ybx1P62960 Gm3272-201ENSMUST00000181181 1229 ntBASIC17.79■□□□□ 0.44
Ybx1P62960 Gm17971-201ENSMUST00000190239 806 ntBASIC17.79■□□□□ 0.44
Ybx1P62960 Pcyox1-206ENSMUST00000204116 546 ntTSL 5 BASIC17.79■□□□□ 0.44
Ybx1P62960 AC156832.2-201ENSMUST00000216217 1295 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Ybx1P62960 AC120002.2-201ENSMUST00000220205 773 ntBASIC17.79■□□□□ 0.44
Ybx1P62960 Olfr315-201ENSMUST00000081533 998 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
Ybx1P62960 Gm10566-201ENSMUST00000086739 996 ntBASIC17.79■□□□□ 0.44
Ybx1P62960 G730003C15Rik-202ENSMUST00000189096 2309 ntBASIC17.79■□□□□ 0.44
Ybx1P62960 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC17.79■□□□□ 0.44
Ybx1P62960 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
Ybx1P62960 Coq5-201ENSMUST00000040421 2037 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Ybx1P62960 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
Ybx1P62960 Gm37711-201ENSMUST00000194907 1749 ntTSL 5 BASIC17.78■□□□□ 0.44
Ybx1P62960 Osbpl1a-207ENSMUST00000121808 3030 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Ybx1P62960 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Ybx1P62960 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Ybx1P62960 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Ybx1P62960 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Ybx1P62960 Mrpl37-201ENSMUST00000030365 1498 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Ybx1P62960 AW011738-201ENSMUST00000105140 1848 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
Ybx1P62960 Bpifa3-202ENSMUST00000109746 1102 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Ybx1P62960 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC17.78■□□□□ 0.44
Ybx1P62960 Gm15952-201ENSMUST00000122858 490 ntTSL 3 BASIC17.78■□□□□ 0.44
Ybx1P62960 Mrps12-204ENSMUST00000171183 883 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
Ybx1P62960 Gm37025-201ENSMUST00000195159 829 ntBASIC17.78■□□□□ 0.44
Ybx1P62960 Taar2-201ENSMUST00000079134 1020 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Ybx1P62960 Rrbp1-202ENSMUST00000037875 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Ybx1P62960 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Ybx1P62960 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Ybx1P62960 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Ybx1P62960 Dmap1-201ENSMUST00000102687 1566 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Ybx1P62960 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Ybx1P62960 Psmd8-203ENSMUST00000186182 1512 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Ybx1P62960 Fam126a-202ENSMUST00000101513 1679 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Ybx1P62960 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC17.77■□□□□ 0.44
Ybx1P62960 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Ybx1P62960 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Ybx1P62960 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Ybx1P62960 Carmn-201ENSMUST00000181155 1778 ntTSL 2 BASIC17.77■□□□□ 0.44
Ybx1P62960 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Ybx1P62960 Gm9013-201ENSMUST00000132939 882 ntBASIC17.77■□□□□ 0.44
Ybx1P62960 4930526A20Rik-201ENSMUST00000134228 941 ntBASIC17.77■□□□□ 0.44
Ybx1P62960 Gm17808-201ENSMUST00000200859 894 ntBASIC17.77■□□□□ 0.44
Ybx1P62960 Gm43791-201ENSMUST00000202914 468 ntTSL 5 BASIC17.77■□□□□ 0.44
Ybx1P62960 Gm45631-201ENSMUST00000210318 1244 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Ybx1P62960 Alkbh2-201ENSMUST00000053657 1073 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Ybx1P62960 Tmem81-201ENSMUST00000058167 1742 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Ybx1P62960 Rasl10b-204ENSMUST00000175848 3249 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
Ybx1P62960 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Ybx1P62960 4930540M05Rik-201ENSMUST00000180527 2068 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Ybx1P62960 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Ybx1P62960 Noxa1-201ENSMUST00000044018 1617 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
Ybx1P62960 Dlgap2-209ENSMUST00000152652 3842 ntAPPRIS P4 TSL 1 (best) BASIC17.76■□□□□ 0.43
Ybx1P62960 Krt27-201ENSMUST00000017732 1550 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Ybx1P62960 Mras-203ENSMUST00000122384 1122 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Ybx1P62960 Gm44924-201ENSMUST00000138087 421 ntTSL 3 BASIC17.76■□□□□ 0.43
Ybx1P62960 Ppdpf-201ENSMUST00000016488 1160 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Ybx1P62960 Gm28033-201ENSMUST00000184224 96 ntBASIC17.76■□□□□ 0.43
Ybx1P62960 Gm28876-201ENSMUST00000188137 703 ntTSL 3 BASIC17.76■□□□□ 0.43
Ybx1P62960 Nudt1-201ENSMUST00000050205 954 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Ybx1P62960 Nudt1-202ENSMUST00000071881 952 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Ybx1P62960 C1qbp-201ENSMUST00000078528 1175 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Ybx1P62960 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Ybx1P62960 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC17.76■□□□□ 0.43
Ybx1P62960 Tmem198-201ENSMUST00000050899 2456 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Ybx1P62960 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
Ybx1P62960 Mtrf1l-201ENSMUST00000019908 2588 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Ybx1P62960 Tmem125-201ENSMUST00000060214 1864 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
Ybx1P62960 Gm15582-201ENSMUST00000132849 1581 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Ybx1P62960 1700024G13Rik-201ENSMUST00000100723 850 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Ybx1P62960 Yif1b-203ENSMUST00000108238 1126 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Ybx1P62960 4930401G09Rik-201ENSMUST00000139500 637 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Ybx1P62960 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Ybx1P62960 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 20.6 ms