Protein–RNA interactions for Protein: P58749

Tm6sf1, Transmembrane 6 superfamily member 1, mousemouse

Predictions only

Length 370 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tm6sf1P58749 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC21.32■■□□□ 1
Tm6sf1P58749 Creb1-203ENSMUST00000171164 1287 ntTSL 1 (best) BASIC21.32■■□□□ 1
Tm6sf1P58749 Zfas1-205ENSMUST00000189909 738 ntTSL 1 (best) BASIC21.32■■□□□ 1
Tm6sf1P58749 Il3ra-202ENSMUST00000223589 738 ntBASIC21.32■■□□□ 1
Tm6sf1P58749 Espn-202ENSMUST00000049305 1142 ntTSL 1 (best) BASIC21.32■■□□□ 1
Tm6sf1P58749 Prr29-201ENSMUST00000009354 1112 ntTSL 1 (best) BASIC21.32■■□□□ 1
Tm6sf1P58749 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC21.32■■□□□ 1
Tm6sf1P58749 Pi4k2b-201ENSMUST00000031081 3139 ntAPPRIS P3 TSL 1 (best) BASIC21.32■■□□□ 1
Tm6sf1P58749 Acads-201ENSMUST00000031524 1870 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Tm6sf1P58749 Misp-205ENSMUST00000219305 2569 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Tm6sf1P58749 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Tm6sf1P58749 Gm19439-201ENSMUST00000198195 2273 ntBASIC21.31■■□□□ 1
Tm6sf1P58749 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Tm6sf1P58749 Pagr1a-202ENSMUST00000200948 1430 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Tm6sf1P58749 Gm42742-205ENSMUST00000202798 1412 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Tm6sf1P58749 Mmp23-201ENSMUST00000030937 1434 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Tm6sf1P58749 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Tm6sf1P58749 Hmgn2-204ENSMUST00000105893 973 ntTSL 3 BASIC21.31■■□□□ 1
Tm6sf1P58749 Gm1673-203ENSMUST00000114383 511 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
Tm6sf1P58749 Gm14968-201ENSMUST00000155528 769 ntTSL 3 BASIC21.31■■□□□ 1
Tm6sf1P58749 Steap1-201ENSMUST00000015796 1230 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Tm6sf1P58749 Prlh-201ENSMUST00000166281 276 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Tm6sf1P58749 Rcbtb2-217ENSMUST00000167401 868 ntTSL 5 BASIC21.31■■□□□ 1
Tm6sf1P58749 AL672049.1-201ENSMUST00000197943 91 ntBASIC21.31■■□□□ 1
Tm6sf1P58749 Ube2a-208ENSMUST00000202812 719 ntTSL 2 BASIC21.31■■□□□ 1
Tm6sf1P58749 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Tm6sf1P58749 A930029G22Rik-201ENSMUST00000181032 1710 ntTSL 1 (best) BASIC21.31■■□□□ 1
Tm6sf1P58749 Gm15635-204ENSMUST00000208024 2539 ntBASIC21.31■■□□□ 1
Tm6sf1P58749 Tekt1-203ENSMUST00000108503 1397 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Tm6sf1P58749 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC21.31■■□□□ 1
Tm6sf1P58749 Dnajb2-208ENSMUST00000188346 1823 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Tm6sf1P58749 Car9-201ENSMUST00000030183 2023 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Tm6sf1P58749 0610012G03Rik-201ENSMUST00000202722 1445 ntAPPRIS P1 BASIC21.3■■□□□ 1
Tm6sf1P58749 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC21.3■■□□□ 1
Tm6sf1P58749 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC21.3■■□□□ 1
Tm6sf1P58749 Zfyve19-201ENSMUST00000090174 2008 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Tm6sf1P58749 Gm2479-201ENSMUST00000173312 1053 ntTSL 3 BASIC21.3■■□□□ 1
Tm6sf1P58749 AC124601.2-201ENSMUST00000222888 759 ntTSL 2 BASIC21.3■■□□□ 1
Tm6sf1P58749 Arl2-201ENSMUST00000025893 1144 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Tm6sf1P58749 Lgals7-201ENSMUST00000081457 754 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Tm6sf1P58749 4833418N02Rik-202ENSMUST00000146560 1495 ntTSL 1 (best) BASIC21.3■■□□□ 1
Tm6sf1P58749 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Tm6sf1P58749 Ppan-201ENSMUST00000004203 1670 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Tm6sf1P58749 Fkrp-201ENSMUST00000061390 2827 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Tm6sf1P58749 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Tm6sf1P58749 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC21.29■■□□□ 1
Tm6sf1P58749 Cct6b-201ENSMUST00000021040 1787 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Tm6sf1P58749 Dtnbp1-203ENSMUST00000220555 1589 ntAPPRIS ALT2 TSL 5 BASIC21.29■■□□□ 1
Tm6sf1P58749 Mthfsl-201ENSMUST00000113110 801 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Tm6sf1P58749 Mthfs-203ENSMUST00000118870 705 ntTSL 3 BASIC21.29■■□□□ 1
Tm6sf1P58749 Ndufa12-201ENSMUST00000020209 1110 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Tm6sf1P58749 Cnih3-204ENSMUST00000209607 564 ntTSL 5 BASIC21.29■■□□□ 1
Tm6sf1P58749 Stard10-211ENSMUST00000210192 1258 ntAPPRIS P1 TSL 5 BASIC21.29■■□□□ 1
Tm6sf1P58749 Mthfs-201ENSMUST00000085256 816 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Tm6sf1P58749 Zbtb24-202ENSMUST00000213797 2734 ntTSL 1 (best) BASIC21.29■■□□□ 1
Tm6sf1P58749 Aifm1-201ENSMUST00000037349 2237 ntAPPRIS P3 TSL 1 (best) BASIC21.29■■□□□ 1
Tm6sf1P58749 Kat14-208ENSMUST00000147747 3299 ntTSL 1 (best) BASIC21.29■■□□□ 1
Tm6sf1P58749 Osgin2-201ENSMUST00000037198 2658 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Tm6sf1P58749 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC21.29■■□□□ 1
Tm6sf1P58749 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC21.28■■□□□ 1
Tm6sf1P58749 Sfrp4-201ENSMUST00000002883 1764 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Tm6sf1P58749 Spi1-201ENSMUST00000002180 2034 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Tm6sf1P58749 Gm3488-202ENSMUST00000181562 1945 ntAPPRIS P5 TSL 5 BASIC21.28■■□□□ 1
Tm6sf1P58749 Hps4-201ENSMUST00000035279 2836 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Tm6sf1P58749 Zpbp2-205ENSMUST00000107513 1240 ntAPPRIS ALT2 TSL 5 BASIC21.28■■□□□ 1
Tm6sf1P58749 Gssos2-201ENSMUST00000130859 727 ntTSL 3 BASIC21.28■■□□□ 1
Tm6sf1P58749 Gm7791-201ENSMUST00000219066 539 ntBASIC21.28■■□□□ 1
Tm6sf1P58749 Lce1m-201ENSMUST00000029520 874 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Tm6sf1P58749 Gm8994-201ENSMUST00000077886 1236 ntAPPRIS P1 BASIC21.28■■□□□ 1
Tm6sf1P58749 Arfip2-202ENSMUST00000084782 2254 ntAPPRIS P2 TSL 5 BASIC21.28■■□□□ 1
Tm6sf1P58749 Ffar3-201ENSMUST00000094583 1625 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Tm6sf1P58749 AC121598.2-201ENSMUST00000228376 2325 ntBASIC21.28■■□□□ 1
Tm6sf1P58749 Dlk2-202ENSMUST00000166280 1341 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Tm6sf1P58749 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC21.28■■□□□ 1
Tm6sf1P58749 Htr5b-201ENSMUST00000055884 1935 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Tm6sf1P58749 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
Tm6sf1P58749 Opa3-202ENSMUST00000161711 1390 ntAPPRIS ALT2 TSL 2 BASIC21.27■■□□□ 1
Tm6sf1P58749 Atp1b1-201ENSMUST00000027863 2580 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Tm6sf1P58749 Capzb-202ENSMUST00000042675 1604 ntTSL 1 (best) BASIC21.27■■□□□ 1
Tm6sf1P58749 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
Tm6sf1P58749 Vsig10l-204ENSMUST00000203769 2473 ntAPPRIS P2 TSL 1 (best) BASIC21.27■■□□□ 1
Tm6sf1P58749 Gjb3-201ENSMUST00000046532 1880 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Tm6sf1P58749 Gm37055-201ENSMUST00000191866 133 ntBASIC21.27■■□□□ 1
Tm6sf1P58749 1700025A08Rik-201ENSMUST00000200753 609 ntBASIC21.27■■□□□ 1
Tm6sf1P58749 AC120002.2-201ENSMUST00000220205 773 ntBASIC21.27■■□□□ 1
Tm6sf1P58749 Crb3-202ENSMUST00000097299 1206 ntAPPRIS P3 TSL 1 (best) BASIC21.27■■□□□ 1
Tm6sf1P58749 Scrn2-201ENSMUST00000021249 1530 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Tm6sf1P58749 Dpep3-201ENSMUST00000034371 1698 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Tm6sf1P58749 Zfp92-202ENSMUST00000086470 2050 ntTSL 1 (best) BASIC21.27■□□□□ 0.99
Tm6sf1P58749 Plac9a-201ENSMUST00000052286 1555 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
Tm6sf1P58749 Praf2-201ENSMUST00000033489 1339 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
Tm6sf1P58749 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC21.27■□□□□ 0.99
Tm6sf1P58749 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC21.26■□□□□ 0.99
Tm6sf1P58749 Rbbp7-203ENSMUST00000112327 1862 ntTSL 5 BASIC21.26■□□□□ 0.99
Tm6sf1P58749 Mbp-201ENSMUST00000047865 2492 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Tm6sf1P58749 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC21.26■□□□□ 0.99
Tm6sf1P58749 Gm28876-201ENSMUST00000188137 703 ntTSL 3 BASIC21.26■□□□□ 0.99
Tm6sf1P58749 Anapc13-203ENSMUST00000188398 727 ntAPPRIS P1 TSL 2 BASIC21.26■□□□□ 0.99
Tm6sf1P58749 AC135963.1-201ENSMUST00000211640 717 ntBASIC21.26■□□□□ 0.99
Tm6sf1P58749 4930554C24Rik-202ENSMUST00000216019 1159 ntTSL 5 BASIC21.26■□□□□ 0.99
Retrieved 100 of 76,532 protein–RNA pairs in 39.8 ms