Protein–RNA interactions for Protein: P56563

Lim2, Lens fiber membrane intrinsic protein, mousemouse

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lim2P56563 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Lim2P56563 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
Lim2P56563 AC121598.2-201ENSMUST00000228376 2325 ntBASIC17.38■□□□□ 0.37
Lim2P56563 Hist1h2bh-201ENSMUST00000224359 1679 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
Lim2P56563 Fkrp-201ENSMUST00000061390 2827 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Lim2P56563 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Lim2P56563 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Lim2P56563 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Lim2P56563 Vsig10l-204ENSMUST00000203769 2473 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Lim2P56563 Ak5-201ENSMUST00000045262 3323 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Lim2P56563 B430219N15Rik-201ENSMUST00000147230 835 ntTSL 2 BASIC17.37■□□□□ 0.37
Lim2P56563 Tlx1os-201ENSMUST00000173437 620 ntTSL 3 BASIC17.37■□□□□ 0.37
Lim2P56563 Flywch2-201ENSMUST00000024704 694 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Lim2P56563 Slc25a31-201ENSMUST00000091184 2128 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Lim2P56563 Agpat3-202ENSMUST00000105387 1316 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Lim2P56563 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
Lim2P56563 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Lim2P56563 Nrxn1-217ENSMUST00000174337 3021 ntTSL 5 BASIC17.37■□□□□ 0.37
Lim2P56563 Rassf7-201ENSMUST00000046890 1525 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Lim2P56563 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Lim2P56563 Glrx2-210ENSMUST00000185362 3337 ntAPPRIS P4 TSL 1 (best) BASIC17.36■□□□□ 0.37
Lim2P56563 Fam126a-202ENSMUST00000101513 1679 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Lim2P56563 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
Lim2P56563 Rmnd1-201ENSMUST00000042251 3139 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Lim2P56563 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Lim2P56563 Plxdc1-202ENSMUST00000107564 619 ntTSL 2 BASIC17.36■□□□□ 0.37
Lim2P56563 D330020A13Rik-201ENSMUST00000181956 1069 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
Lim2P56563 Mir6982-201ENSMUST00000184354 68 ntBASIC17.36■□□□□ 0.37
Lim2P56563 Gm4974-201ENSMUST00000209974 875 ntBASIC17.36■□□□□ 0.37
Lim2P56563 Ppic-201ENSMUST00000025419 1286 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Lim2P56563 Lat-201ENSMUST00000032997 1235 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Lim2P56563 Coro7-202ENSMUST00000090480 1147 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Lim2P56563 Arrb2-203ENSMUST00000102563 1352 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Lim2P56563 Fam181a-201ENSMUST00000179363 1406 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
Lim2P56563 Sertad4-204ENSMUST00000155579 3350 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Lim2P56563 P2rx2-201ENSMUST00000058016 1895 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Lim2P56563 Gm43808-201ENSMUST00000202534 2065 ntBASIC17.35■□□□□ 0.37
Lim2P56563 Pi4k2b-201ENSMUST00000031081 3139 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
Lim2P56563 Fam129c-208ENSMUST00000143662 2267 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
Lim2P56563 Gm20544-201ENSMUST00000174338 690 ntTSL 3 BASIC17.35■□□□□ 0.37
Lim2P56563 Gm37055-201ENSMUST00000191866 133 ntBASIC17.35■□□□□ 0.37
Lim2P56563 Pomc-204ENSMUST00000219543 1043 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Lim2P56563 AC156016.1-201ENSMUST00000227190 1035 ntBASIC17.35■□□□□ 0.37
Lim2P56563 Espn-202ENSMUST00000049305 1142 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Lim2P56563 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Lim2P56563 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
Lim2P56563 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Lim2P56563 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC17.35■□□□□ 0.37
Lim2P56563 Fbxo7-203ENSMUST00000120344 1655 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Lim2P56563 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Lim2P56563 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Lim2P56563 Txnl4b-201ENSMUST00000034159 1890 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Lim2P56563 Mfsd10-202ENSMUST00000114329 1906 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Lim2P56563 AC125311.2-201ENSMUST00000227477 1940 ntBASIC17.35■□□□□ 0.37
Lim2P56563 Raver2-201ENSMUST00000038463 4045 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Lim2P56563 Ift74-201ENSMUST00000030311 2139 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
Lim2P56563 Mag-201ENSMUST00000040548 2419 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Lim2P56563 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Lim2P56563 Irgq-201ENSMUST00000049020 6083 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Lim2P56563 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Lim2P56563 Zpbp2-205ENSMUST00000107513 1240 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
Lim2P56563 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC17.34■□□□□ 0.37
Lim2P56563 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Lim2P56563 Mettl4-ps1-202ENSMUST00000130218 1323 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Lim2P56563 Prss16-204ENSMUST00000150547 1159 ntTSL 3 BASIC17.34■□□□□ 0.37
Lim2P56563 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC17.34■□□□□ 0.37
Lim2P56563 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
Lim2P56563 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Lim2P56563 Gm9484-201ENSMUST00000195892 1159 ntBASIC17.34■□□□□ 0.37
Lim2P56563 Gm43338-201ENSMUST00000198617 2223 ntBASIC17.34■□□□□ 0.37
Lim2P56563 Tdh-201ENSMUST00000022522 1881 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Lim2P56563 Fgf8-202ENSMUST00000026241 1168 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Lim2P56563 Tm2d1-201ENSMUST00000030292 952 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Lim2P56563 Nme2-202ENSMUST00000072566 734 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Lim2P56563 Lrrc73-201ENSMUST00000095262 1384 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Lim2P56563 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Lim2P56563 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC17.34■□□□□ 0.37
Lim2P56563 Eepd1-201ENSMUST00000040677 2723 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Lim2P56563 Plppr2-201ENSMUST00000046371 2626 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Lim2P56563 Ttyh3-202ENSMUST00000197452 4576 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
Lim2P56563 Stk32c-202ENSMUST00000165870 1883 ntTSL 5 BASIC17.33■□□□□ 0.37
Lim2P56563 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Lim2P56563 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC17.33■□□□□ 0.37
Lim2P56563 Rbmxl1-201ENSMUST00000049245 1695 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Lim2P56563 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Lim2P56563 Gpat3-203ENSMUST00000112887 3059 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Lim2P56563 A530016L24Rik-202ENSMUST00000223266 1547 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
Lim2P56563 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Lim2P56563 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Lim2P56563 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Lim2P56563 Epo-203ENSMUST00000111039 706 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Lim2P56563 Phgr1-202ENSMUST00000130293 542 ntAPPRIS P2 TSL 5 BASIC17.33■□□□□ 0.36
Lim2P56563 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC17.33■□□□□ 0.36
Lim2P56563 Gm9694-201ENSMUST00000193347 1189 ntBASIC17.33■□□□□ 0.36
Lim2P56563 2310033P09Rik-201ENSMUST00000020719 1285 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Lim2P56563 Arhgef4-208ENSMUST00000211073 171 ntBASIC17.33■□□□□ 0.36
Lim2P56563 Timm23-208ENSMUST00000226683 750 ntBASIC17.33■□□□□ 0.36
Lim2P56563 Ntpcr-201ENSMUST00000034313 1155 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Lim2P56563 Nnat-201ENSMUST00000088484 458 ntTSL 2 BASIC17.33■□□□□ 0.36
Lim2P56563 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC17.33■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 37.9 ms