Protein–RNA interactions for Protein: P50586

Tub, Tubby protein, mousemouse

Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TubP50586 Odf3b-204ENSMUST00000227834 930 ntBASIC17.81■□□□□ 0.44
TubP50586 Npm3-201ENSMUST00000070215 888 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
TubP50586 Olfr1411-201ENSMUST00000073748 972 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
TubP50586 Zbtb5-204ENSMUST00000180217 4708 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
TubP50586 Rassf7-201ENSMUST00000046890 1525 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
TubP50586 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC17.81■□□□□ 0.44
TubP50586 Cetn4-205ENSMUST00000140956 2981 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
TubP50586 Trim68-201ENSMUST00000082175 2388 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
TubP50586 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
TubP50586 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
TubP50586 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
TubP50586 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
TubP50586 Podxl2-201ENSMUST00000038409 1994 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
TubP50586 Rbmxl1-201ENSMUST00000049245 1695 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
TubP50586 Tekt1-203ENSMUST00000108503 1397 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
TubP50586 Ptpre-201ENSMUST00000073961 5410 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
TubP50586 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC17.8■□□□□ 0.44
TubP50586 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
TubP50586 Gm17098-201ENSMUST00000166507 628 ntTSL 5 BASIC17.8■□□□□ 0.44
TubP50586 Rcbtb2-217ENSMUST00000167401 868 ntTSL 5 BASIC17.8■□□□□ 0.44
TubP50586 Gm8969-201ENSMUST00000199694 526 ntBASIC17.8■□□□□ 0.44
TubP50586 Gm21814-202ENSMUST00000203277 873 ntBASIC17.8■□□□□ 0.44
TubP50586 Gm5417-201ENSMUST00000079706 384 ntBASIC17.8■□□□□ 0.44
TubP50586 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
TubP50586 Tbcel-201ENSMUST00000066148 5000 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
TubP50586 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC17.8■□□□□ 0.44
TubP50586 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
TubP50586 Gas2-201ENSMUST00000051912 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
TubP50586 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
TubP50586 Tgds-201ENSMUST00000022727 1682 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
TubP50586 March8-202ENSMUST00000101032 4611 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
TubP50586 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
TubP50586 Igsf23-201ENSMUST00000043440 1908 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
TubP50586 Echdc2-204ENSMUST00000116309 1238 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
TubP50586 Atf7ip2-204ENSMUST00000119023 1048 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
TubP50586 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
TubP50586 Mir6982-201ENSMUST00000184354 68 ntBASIC17.79■□□□□ 0.44
TubP50586 Gm38027-201ENSMUST00000192315 235 ntBASIC17.79■□□□□ 0.44
TubP50586 Enah-205ENSMUST00000177811 4231 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
TubP50586 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
TubP50586 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
TubP50586 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
TubP50586 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC17.79■□□□□ 0.44
TubP50586 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC17.79■□□□□ 0.44
TubP50586 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
TubP50586 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC17.79■□□□□ 0.44
TubP50586 Pkp4-202ENSMUST00000102754 4614 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
TubP50586 Dlk2-202ENSMUST00000166280 1341 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
TubP50586 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC17.78■□□□□ 0.44
TubP50586 Gm3264-202ENSMUST00000166776 882 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
TubP50586 Utf1-201ENSMUST00000168457 1227 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
TubP50586 Gm3375-201ENSMUST00000203929 796 ntBASIC17.78■□□□□ 0.44
TubP50586 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC17.78■□□□□ 0.44
TubP50586 4930554C24Rik-202ENSMUST00000216019 1159 ntTSL 5 BASIC17.78■□□□□ 0.44
TubP50586 Tollip-202ENSMUST00000055819 1100 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
TubP50586 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
TubP50586 Aurkb-201ENSMUST00000021277 1950 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
TubP50586 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
TubP50586 Polr3gl-201ENSMUST00000091924 1427 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
TubP50586 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
TubP50586 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.44
TubP50586 Dus3l-201ENSMUST00000007747 2303 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
TubP50586 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
TubP50586 Rrp15-201ENSMUST00000001339 1321 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
TubP50586 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC17.77■□□□□ 0.44
TubP50586 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC17.77■□□□□ 0.44
TubP50586 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.44
TubP50586 Pigu-201ENSMUST00000077626 1636 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.44
TubP50586 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
TubP50586 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
TubP50586 AC125311.2-201ENSMUST00000227477 1940 ntBASIC17.77■□□□□ 0.44
TubP50586 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC17.77■□□□□ 0.44
TubP50586 Sct-202ENSMUST00000167790 507 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
TubP50586 Ccnd2-204ENSMUST00000201637 1006 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
TubP50586 Casp3-203ENSMUST00000210534 583 ntTSL 5 BASIC17.77■□□□□ 0.44
TubP50586 Rps12-206ENSMUST00000218221 460 ntTSL 5 BASIC17.77■□□□□ 0.44
TubP50586 Fgf8-202ENSMUST00000026241 1168 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
TubP50586 Sct-201ENSMUST00000046156 534 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
TubP50586 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC17.77■□□□□ 0.43
TubP50586 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.43
TubP50586 Scrn2-201ENSMUST00000021249 1530 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
TubP50586 Dock9-202ENSMUST00000100299 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.43
TubP50586 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
TubP50586 Mink1-205ENSMUST00000102559 4865 ntAPPRIS P4 TSL 1 (best) BASIC17.76■□□□□ 0.43
TubP50586 Edn2-201ENSMUST00000030384 1462 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
TubP50586 Smim14-202ENSMUST00000121661 1056 ntAPPRIS P1 TSL 3 BASIC17.76■□□□□ 0.43
TubP50586 Nsl1-203ENSMUST00000139340 837 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
TubP50586 Cmtm7-201ENSMUST00000035009 993 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
TubP50586 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
TubP50586 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
TubP50586 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
TubP50586 Opa3-202ENSMUST00000161711 1390 ntAPPRIS ALT2 TSL 2 BASIC17.76■□□□□ 0.43
TubP50586 A930001A20Rik-201ENSMUST00000182586 1366 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
TubP50586 Gm44832-201ENSMUST00000208849 2303 ntBASIC17.76■□□□□ 0.43
TubP50586 Gm19721-201ENSMUST00000195284 1764 ntBASIC17.76■□□□□ 0.43
TubP50586 Kat14-208ENSMUST00000147747 3299 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
TubP50586 Kmt5c-201ENSMUST00000098853 2189 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
TubP50586 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
TubP50586 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
TubP50586 Slc35g1-201ENSMUST00000054098 3471 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 26.9 ms