Protein–RNA interactions for Protein: P50481

Lhx3, LIM/homeobox protein Lhx3, mousemouse

Predictions only

Length 400 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lhx3P50481 Olfr464-201ENSMUST00000074874 1084 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
Lhx3P50481 Zfp119b-201ENSMUST00000056147 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Lhx3P50481 Gm3488-202ENSMUST00000181562 1945 ntAPPRIS P5 TSL 5 BASIC17.62■□□□□ 0.41
Lhx3P50481 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC17.62■□□□□ 0.41
Lhx3P50481 Nfkbib-201ENSMUST00000032815 2061 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Lhx3P50481 Zdhhc6-207ENSMUST00000224897 2168 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
Lhx3P50481 Bend6-202ENSMUST00000115161 2231 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Lhx3P50481 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Lhx3P50481 Fuz-201ENSMUST00000071207 1698 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Lhx3P50481 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Lhx3P50481 Tmem47-203ENSMUST00000171953 1801 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Lhx3P50481 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Lhx3P50481 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
Lhx3P50481 Med9-201ENSMUST00000081980 1920 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Lhx3P50481 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Lhx3P50481 Mir9-3hg-206ENSMUST00000182937 636 ntTSL 3 BASIC17.61■□□□□ 0.41
Lhx3P50481 Apba3-201ENSMUST00000057798 2106 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Lhx3P50481 Psmd4-201ENSMUST00000071664 1276 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Lhx3P50481 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC17.61■□□□□ 0.41
Lhx3P50481 Rogdi-207ENSMUST00000202281 1355 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Lhx3P50481 Dcps-202ENSMUST00000119847 1445 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Lhx3P50481 4930519A11Rik-201ENSMUST00000181381 1523 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Lhx3P50481 2810408A11Rik-203ENSMUST00000102580 1640 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
Lhx3P50481 Gm16861-201ENSMUST00000181498 1647 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Lhx3P50481 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Lhx3P50481 Krt15-201ENSMUST00000107411 1700 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Lhx3P50481 Kdelr2-201ENSMUST00000110731 1829 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Lhx3P50481 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Lhx3P50481 Mapre3-201ENSMUST00000031058 2021 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Lhx3P50481 Glmn-201ENSMUST00000078021 2015 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Lhx3P50481 Il17rb-202ENSMUST00000122205 2094 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
Lhx3P50481 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Lhx3P50481 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Lhx3P50481 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Lhx3P50481 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Lhx3P50481 Tnnt2-202ENSMUST00000112085 1076 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
Lhx3P50481 Tnnt2-203ENSMUST00000112086 1094 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
Lhx3P50481 Tnnt2-204ENSMUST00000112087 1112 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
Lhx3P50481 Tnnt2-206ENSMUST00000178854 1076 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
Lhx3P50481 Gm28876-201ENSMUST00000188137 703 ntTSL 3 BASIC17.6■□□□□ 0.41
Lhx3P50481 Tnnt2-211ENSMUST00000189355 1112 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
Lhx3P50481 Tnnt2-212ENSMUST00000189732 1123 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
Lhx3P50481 AC122465.1-201ENSMUST00000220813 1209 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Lhx3P50481 Gm9987-201ENSMUST00000069768 567 ntBASIC17.6■□□□□ 0.41
Lhx3P50481 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC17.6■□□□□ 0.41
Lhx3P50481 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Lhx3P50481 Taf6l-211ENSMUST00000177056 2006 ntTSL 5 BASIC17.6■□□□□ 0.41
Lhx3P50481 Arl1-202ENSMUST00000116234 2080 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Lhx3P50481 Cep57-208ENSMUST00000147115 2262 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Lhx3P50481 Tmem132d-201ENSMUST00000044441 6139 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Lhx3P50481 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Lhx3P50481 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Lhx3P50481 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
Lhx3P50481 Asnsd1-201ENSMUST00000027264 2442 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Lhx3P50481 Mfsd10-202ENSMUST00000114329 1906 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Lhx3P50481 Fam110a-204ENSMUST00000109865 1853 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
Lhx3P50481 Dnajb2-208ENSMUST00000188346 1823 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Lhx3P50481 Ing4-205ENSMUST00000140131 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Lhx3P50481 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC17.59■□□□□ 0.41
Lhx3P50481 Dnajb3-201ENSMUST00000119972 1051 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
Lhx3P50481 Slc2a8-204ENSMUST00000153484 1168 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Lhx3P50481 Pih1d2-201ENSMUST00000000171 1256 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Lhx3P50481 Fuz-209ENSMUST00000208179 1164 ntTSL 5 BASIC17.59■□□□□ 0.41
Lhx3P50481 Prok1-201ENSMUST00000049852 813 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Lhx3P50481 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Lhx3P50481 Kcnj4-201ENSMUST00000057801 2148 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Lhx3P50481 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Lhx3P50481 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
Lhx3P50481 Spata18-202ENSMUST00000071077 1978 ntAPPRIS P2 TSL 5 BASIC17.59■□□□□ 0.41
Lhx3P50481 Sharpin-201ENSMUST00000023211 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Lhx3P50481 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.41
Lhx3P50481 Gm16759-201ENSMUST00000126238 1393 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Lhx3P50481 Dcxr-202ENSMUST00000106148 830 ntTSL 2 BASIC17.58■□□□□ 0.4
Lhx3P50481 Gm2431-201ENSMUST00000171531 519 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
Lhx3P50481 AC159205.6-201ENSMUST00000224935 887 ntBASIC17.58■□□□□ 0.4
Lhx3P50481 Gm21974-201ENSMUST00000126662 2037 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
Lhx3P50481 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Lhx3P50481 Pea15a-201ENSMUST00000013842 2501 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Lhx3P50481 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Lhx3P50481 Arpc4-201ENSMUST00000156898 2270 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Lhx3P50481 Bub3-201ENSMUST00000084502 2218 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Lhx3P50481 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
Lhx3P50481 Gm37811-201ENSMUST00000192416 2601 ntBASIC17.57■□□□□ 0.4
Lhx3P50481 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
Lhx3P50481 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Lhx3P50481 Sept10-203ENSMUST00000220156 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Lhx3P50481 Pdxdc1-203ENSMUST00000115803 1268 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
Lhx3P50481 Izumo1r-204ENSMUST00000121116 726 ntTSL 2 BASIC17.57■□□□□ 0.4
Lhx3P50481 Ptf1aos-201ENSMUST00000122978 916 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Lhx3P50481 1810062O18Rik-202ENSMUST00000128848 745 ntTSL 3 BASIC17.57■□□□□ 0.4
Lhx3P50481 Gm14453-201ENSMUST00000139677 553 ntTSL 3 BASIC17.57■□□□□ 0.4
Lhx3P50481 Cmc1-202ENSMUST00000215799 531 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Lhx3P50481 Pigf-201ENSMUST00000024957 988 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Lhx3P50481 BC048679-201ENSMUST00000073406 522 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
Lhx3P50481 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Lhx3P50481 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
Lhx3P50481 Smim3-201ENSMUST00000042710 1984 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Lhx3P50481 Skap1-203ENSMUST00000100521 1539 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Lhx3P50481 Skap1-204ENSMUST00000103154 1507 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
Lhx3P50481 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC17.57■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 20.3 ms