Protein–RNA interactions for Protein: P49135

Ercc3, General transcription and DNA repair factor IIH helicase subunit XPB, mousemouse

Predictions only

Length 783 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ercc3P49135 Diaph1-205ENSMUST00000115634 5666 ntAPPRIS P3 TSL 5 BASIC20.58■□□□□ 0.89
Ercc3P49135 Ccnd2-204ENSMUST00000201637 1006 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Ercc3P49135 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Ercc3P49135 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Ercc3P49135 Podxl2-201ENSMUST00000038409 1994 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
Ercc3P49135 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Ercc3P49135 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
Ercc3P49135 Atf7ip2-204ENSMUST00000119023 1048 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Ercc3P49135 Gm13816-201ENSMUST00000152230 715 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Ercc3P49135 Gm19610-201ENSMUST00000202894 408 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Ercc3P49135 Lysmd2-201ENSMUST00000034702 1189 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Ercc3P49135 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC20.57■□□□□ 0.88
Ercc3P49135 Eepd1-201ENSMUST00000040677 2723 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Ercc3P49135 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Ercc3P49135 Plxdc1-202ENSMUST00000107564 619 ntTSL 2 BASIC20.56■□□□□ 0.88
Ercc3P49135 Prlh-201ENSMUST00000166281 276 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Ercc3P49135 Sct-202ENSMUST00000167790 507 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
Ercc3P49135 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Ercc3P49135 Impa1-204ENSMUST00000191670 1100 ntTSL 2 BASIC20.56■□□□□ 0.88
Ercc3P49135 Tpsg1-201ENSMUST00000024999 1186 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Ercc3P49135 Sct-201ENSMUST00000046156 534 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Ercc3P49135 Tollip-202ENSMUST00000055819 1100 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Ercc3P49135 Cebpg-201ENSMUST00000070191 914 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
Ercc3P49135 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
Ercc3P49135 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Ercc3P49135 Nsmf-202ENSMUST00000074422 2824 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Ercc3P49135 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Ercc3P49135 Gm44832-201ENSMUST00000208849 2303 ntBASIC20.55■□□□□ 0.88
Ercc3P49135 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Ercc3P49135 Enah-205ENSMUST00000177811 4231 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
Ercc3P49135 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC20.55■□□□□ 0.88
Ercc3P49135 Prss16-204ENSMUST00000150547 1159 ntTSL 3 BASIC20.55■□□□□ 0.88
Ercc3P49135 Mir8112-201ENSMUST00000184382 131 ntBASIC20.55■□□□□ 0.88
Ercc3P49135 Gm3375-201ENSMUST00000203929 796 ntBASIC20.55■□□□□ 0.88
Ercc3P49135 Lat-201ENSMUST00000032997 1235 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Ercc3P49135 Mrps28-201ENSMUST00000042148 783 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Ercc3P49135 Pfdn4-201ENSMUST00000063682 935 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Ercc3P49135 Nnat-201ENSMUST00000088484 458 ntTSL 2 BASIC20.55■□□□□ 0.88
Ercc3P49135 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC20.55■□□□□ 0.88
Ercc3P49135 Akt2-205ENSMUST00000108344 4544 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Ercc3P49135 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC20.55■□□□□ 0.88
Ercc3P49135 Wasf3-201ENSMUST00000016143 5196 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Ercc3P49135 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Ercc3P49135 Pea15a-201ENSMUST00000013842 2501 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Ercc3P49135 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Ercc3P49135 Calu-208ENSMUST00000173694 611 ntTSL 5 BASIC20.54■□□□□ 0.88
Ercc3P49135 Casp3-203ENSMUST00000210534 583 ntTSL 5 BASIC20.54■□□□□ 0.88
Ercc3P49135 Tomm20-202ENSMUST00000212771 458 ntTSL 2 BASIC20.54■□□□□ 0.88
Ercc3P49135 Opa3-202ENSMUST00000161711 1390 ntAPPRIS ALT2 TSL 2 BASIC20.54■□□□□ 0.88
Ercc3P49135 Igsf23-201ENSMUST00000043440 1908 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Ercc3P49135 Bcar1-201ENSMUST00000166232 3142 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
Ercc3P49135 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Ercc3P49135 Ptgfrn-201ENSMUST00000102694 5902 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Ercc3P49135 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC20.54■□□□□ 0.88
Ercc3P49135 Arhgef16-201ENSMUST00000030898 2860 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Ercc3P49135 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Ercc3P49135 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Ercc3P49135 Mycn-202ENSMUST00000130990 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Ercc3P49135 Usp36-201ENSMUST00000092382 5609 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
Ercc3P49135 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Ercc3P49135 Map3k10-201ENSMUST00000036453 3682 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Ercc3P49135 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Ercc3P49135 Mcl1-201ENSMUST00000037947 3418 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Ercc3P49135 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Ercc3P49135 5430402O13Rik-201ENSMUST00000126537 869 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Ercc3P49135 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Ercc3P49135 Fkbp3-201ENSMUST00000021332 1022 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Ercc3P49135 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Ercc3P49135 Adam15-203ENSMUST00000107446 1686 ntTSL 5 BASIC20.53■□□□□ 0.88
Ercc3P49135 Fam129c-208ENSMUST00000143662 2267 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
Ercc3P49135 Uso1-204ENSMUST00000202155 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Ercc3P49135 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Ercc3P49135 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Ercc3P49135 Rnf169-201ENSMUST00000080817 7147 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
Ercc3P49135 Dlk2-202ENSMUST00000166280 1341 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Ercc3P49135 Sorcs2-201ENSMUST00000037370 5707 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Ercc3P49135 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.88
Ercc3P49135 2310022A10Rik-201ENSMUST00000067386 2701 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.88
Ercc3P49135 Aig1-205ENSMUST00000162610 1554 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Ercc3P49135 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
Ercc3P49135 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC20.52■□□□□ 0.88
Ercc3P49135 Gm24841-201ENSMUST00000158676 357 ntBASIC20.52■□□□□ 0.88
Ercc3P49135 2310001K24Rik-202ENSMUST00000186760 740 ntTSL 2 BASIC20.52■□□□□ 0.88
Ercc3P49135 Gm21814-202ENSMUST00000203277 873 ntBASIC20.52■□□□□ 0.88
Ercc3P49135 Timm23-208ENSMUST00000226683 750 ntBASIC20.52■□□□□ 0.88
Ercc3P49135 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Ercc3P49135 Guca1a-201ENSMUST00000059348 871 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Ercc3P49135 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC20.52■□□□□ 0.88
Ercc3P49135 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC20.52■□□□□ 0.88
Ercc3P49135 Acbd4-201ENSMUST00000024492 2075 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.87
Ercc3P49135 Aurkb-201ENSMUST00000021277 1950 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
Ercc3P49135 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.87
Ercc3P49135 Arrb1-210ENSMUST00000179755 7135 ntTSL 5 BASIC20.51■□□□□ 0.87
Ercc3P49135 Arrb1-202ENSMUST00000098266 7132 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Ercc3P49135 Scamp4-201ENSMUST00000079883 1804 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Ercc3P49135 Gaa-202ENSMUST00000106258 1369 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Ercc3P49135 Gm16863-201ENSMUST00000181476 2431 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Ercc3P49135 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC20.51■□□□□ 0.87
Ercc3P49135 Cxxc4-201ENSMUST00000166288 1290 ntAPPRIS ALT2 TSL 5 BASIC20.51■□□□□ 0.87
Ercc3P49135 Cib1-207ENSMUST00000206084 772 ntTSL 3 BASIC20.51■□□□□ 0.87
Retrieved 100 of 76,532 protein–RNA pairs in 29.3 ms