Protein–RNA interactions for Protein: P46935

Nedd4, E3 ubiquitin-protein ligase NEDD4, mousemouse

Known RBP Predictions only

Length 887 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nedd4P46935 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Nedd4P46935 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC20.89■□□□□ 0.94
Nedd4P46935 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
Nedd4P46935 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Nedd4P46935 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.93
Nedd4P46935 Gm15372-201ENSMUST00000120729 834 ntBASIC20.89■□□□□ 0.93
Nedd4P46935 Tsen15-201ENSMUST00000015124 1133 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Nedd4P46935 9530052E02Rik-201ENSMUST00000180750 949 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Nedd4P46935 Ank1-201ENSMUST00000033947 1030 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Nedd4P46935 Rps4l-201ENSMUST00000071745 943 ntBASIC20.89■□□□□ 0.93
Nedd4P46935 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Nedd4P46935 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.93
Nedd4P46935 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Nedd4P46935 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Nedd4P46935 Krt13-201ENSMUST00000007275 1654 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Nedd4P46935 AC154855.1-201ENSMUST00000227353 1458 ntBASIC20.88■□□□□ 0.93
Nedd4P46935 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
Nedd4P46935 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Nedd4P46935 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
Nedd4P46935 Gm8000-201ENSMUST00000188378 592 ntBASIC20.88■□□□□ 0.93
Nedd4P46935 Lat-206ENSMUST00000206793 1215 ntAPPRIS ALT2 TSL 5 BASIC20.88■□□□□ 0.93
Nedd4P46935 AC153556.1-201ENSMUST00000215135 794 ntTSL 5 BASIC20.88■□□□□ 0.93
Nedd4P46935 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC20.88■□□□□ 0.93
Nedd4P46935 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC20.88■□□□□ 0.93
Nedd4P46935 Golph3-205ENSMUST00000228671 2842 ntBASIC20.88■□□□□ 0.93
Nedd4P46935 Rad23a-202ENSMUST00000109761 1842 ntAPPRIS ALT1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Nedd4P46935 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Nedd4P46935 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Nedd4P46935 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Nedd4P46935 Fxr2-201ENSMUST00000018909 2951 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Nedd4P46935 Arpc5-201ENSMUST00000077755 1914 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Nedd4P46935 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC20.87■□□□□ 0.93
Nedd4P46935 Rnf181-203ENSMUST00000114095 869 ntTSL 3 BASIC20.87■□□□□ 0.93
Nedd4P46935 Ndufb7-201ENSMUST00000036996 623 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Nedd4P46935 Mrpl34-201ENSMUST00000048914 607 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Nedd4P46935 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Nedd4P46935 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
Nedd4P46935 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC20.87■□□□□ 0.93
Nedd4P46935 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Nedd4P46935 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Nedd4P46935 Txndc5-201ENSMUST00000035988 2843 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
Nedd4P46935 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Nedd4P46935 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Nedd4P46935 Ube2f-204ENSMUST00000178627 1363 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Nedd4P46935 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Nedd4P46935 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
Nedd4P46935 Bmpr1b-203ENSMUST00000106230 2147 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Nedd4P46935 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
Nedd4P46935 Sdhb-201ENSMUST00000010007 1142 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Nedd4P46935 Gm7935-201ENSMUST00000100555 1278 ntBASIC20.86■□□□□ 0.93
Nedd4P46935 Frs3os-201ENSMUST00000136531 978 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Nedd4P46935 AC154621.1-201ENSMUST00000226155 1119 ntBASIC20.86■□□□□ 0.93
Nedd4P46935 Cda-201ENSMUST00000030535 846 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Nedd4P46935 Cd300c-201ENSMUST00000061637 690 ntAPPRIS ALT2 TSL 5 BASIC20.86■□□□□ 0.93
Nedd4P46935 Cd300c-202ENSMUST00000092466 700 ntAPPRIS P5 TSL 5 BASIC20.86■□□□□ 0.93
Nedd4P46935 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Nedd4P46935 Gm5414-201ENSMUST00000062879 1659 ntAPPRIS P1 TSL 2 BASIC20.86■□□□□ 0.93
Nedd4P46935 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Nedd4P46935 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Nedd4P46935 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Nedd4P46935 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Nedd4P46935 Stam2-202ENSMUST00000127316 1928 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Nedd4P46935 Gm128-202ENSMUST00000107197 1289 ntTSL 2 BASIC20.85■□□□□ 0.93
Nedd4P46935 Mcub-204ENSMUST00000153506 1005 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Nedd4P46935 Acaa1a-203ENSMUST00000175743 1219 ntTSL 5 BASIC20.85■□□□□ 0.93
Nedd4P46935 Acaa1a-207ENSMUST00000176397 996 ntTSL 5 BASIC20.85■□□□□ 0.93
Nedd4P46935 Ccnd3-208ENSMUST00000182539 931 ntTSL 2 BASIC20.85■□□□□ 0.93
Nedd4P46935 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Nedd4P46935 Rhoc-201ENSMUST00000002303 1202 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Nedd4P46935 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Nedd4P46935 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC20.85■□□□□ 0.93
Nedd4P46935 Gm5784-201ENSMUST00000179344 2478 ntBASIC20.85■□□□□ 0.93
Nedd4P46935 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Nedd4P46935 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Nedd4P46935 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Nedd4P46935 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Nedd4P46935 Cenpw-201ENSMUST00000099985 1532 ntAPPRIS P2 TSL 1 (best) BASIC20.84■□□□□ 0.93
Nedd4P46935 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Nedd4P46935 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Nedd4P46935 Pgrmc2-201ENSMUST00000058578 3007 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Nedd4P46935 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC20.84■□□□□ 0.93
Nedd4P46935 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
Nedd4P46935 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
Nedd4P46935 Gm2213-201ENSMUST00000197485 688 ntBASIC20.84■□□□□ 0.93
Nedd4P46935 Gm43332-201ENSMUST00000202511 1044 ntBASIC20.84■□□□□ 0.93
Nedd4P46935 Dcdc2c-201ENSMUST00000020963 1041 ntTSL 5 BASIC20.84■□□□□ 0.93
Nedd4P46935 Nek4-204ENSMUST00000226833 1252 ntAPPRIS ALT2 BASIC20.84■□□□□ 0.93
Nedd4P46935 BC021767-201ENSMUST00000126387 1716 ntBASIC20.84■□□□□ 0.93
Nedd4P46935 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Nedd4P46935 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Nedd4P46935 Rdx-202ENSMUST00000061352 1502 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
Nedd4P46935 Tubg1-201ENSMUST00000043680 1802 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Nedd4P46935 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Nedd4P46935 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
Nedd4P46935 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC20.83■□□□□ 0.93
Nedd4P46935 Lcn12-202ENSMUST00000114245 619 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
Nedd4P46935 Tsen15-205ENSMUST00000162371 431 ntTSL 5 BASIC20.83■□□□□ 0.93
Nedd4P46935 Gm1818-201ENSMUST00000169406 1184 ntBASIC20.83■□□□□ 0.93
Nedd4P46935 Gm28411-202ENSMUST00000191318 464 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
Nedd4P46935 Gm38119-201ENSMUST00000192027 755 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.93
Retrieved 100 of 76,532 protein–RNA pairs in 29.5 ms