Protein–RNA interactions for Protein: P40645

Sox6, Transcription factor SOX-6, mousemouse

Predictions only

Length 827 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox6P40645 Acbd3-201ENSMUST00000027780 3471 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Sox6P40645 5730522E02Rik-201ENSMUST00000109511 1162 ntAPPRIS P5 TSL 1 (best) BASIC16.33■□□□□ 0.2
Sox6P40645 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
Sox6P40645 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Sox6P40645 Whrn-201ENSMUST00000063650 4016 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Sox6P40645 1810013L24Rik-201ENSMUST00000023150 4066 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Sox6P40645 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Sox6P40645 Zdhhc15-201ENSMUST00000042070 5509 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Sox6P40645 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Sox6P40645 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Sox6P40645 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
Sox6P40645 Cox16-207ENSMUST00000169124 685 ntTSL 2 BASIC16.32■□□□□ 0.2
Sox6P40645 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Sox6P40645 Ndufa12-204ENSMUST00000179990 566 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Sox6P40645 Sult2b1-204ENSMUST00000209739 1858 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
Sox6P40645 Gm46218-201ENSMUST00000215448 801 ntTSL 5 BASIC16.32■□□□□ 0.2
Sox6P40645 Gm9194-201ENSMUST00000220749 1447 ntBASIC16.32■□□□□ 0.2
Sox6P40645 Bricd5-201ENSMUST00000054946 997 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Sox6P40645 Aifm2-201ENSMUST00000067857 1442 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Sox6P40645 Cep57-208ENSMUST00000147115 2262 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Sox6P40645 Ddhd2-206ENSMUST00000211688 2265 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Sox6P40645 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Sox6P40645 Runx2-203ENSMUST00000113572 6463 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Sox6P40645 Galnt13-202ENSMUST00000112634 7639 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Sox6P40645 Arrb2-204ENSMUST00000102564 1848 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Sox6P40645 Abtb1-201ENSMUST00000032169 1845 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Sox6P40645 Acy3-201ENSMUST00000054030 1505 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Sox6P40645 Clic1-201ENSMUST00000007257 1466 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Sox6P40645 Dusp4-201ENSMUST00000033930 2740 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Sox6P40645 Naxe-201ENSMUST00000029708 908 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Sox6P40645 Gm7075-201ENSMUST00000054760 425 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
Sox6P40645 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Sox6P40645 Cct8-201ENSMUST00000026704 2394 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Sox6P40645 Pgm2l1-202ENSMUST00000084935 8834 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Sox6P40645 Snrk-201ENSMUST00000118886 4811 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Sox6P40645 Arid4b-204ENSMUST00000110536 5783 ntTSL 5 BASIC16.31■□□□□ 0.2
Sox6P40645 Zfp746-201ENSMUST00000073124 3651 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
Sox6P40645 Tle2-213ENSMUST00000146358 2749 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
Sox6P40645 Tor2a-201ENSMUST00000009707 1536 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Sox6P40645 Gm37194-201ENSMUST00000193092 3031 ntBASIC16.3■□□□□ 0.2
Sox6P40645 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Sox6P40645 Fbxo47-201ENSMUST00000093939 2162 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Sox6P40645 Zfand5-201ENSMUST00000025659 2834 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Sox6P40645 Abhd10-201ENSMUST00000066983 2848 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Sox6P40645 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC16.3■□□□□ 0.2
Sox6P40645 Prmt1-205ENSMUST00000207659 945 ntTSL 5 BASIC16.3■□□□□ 0.2
Sox6P40645 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC16.3■□□□□ 0.2
Sox6P40645 AC122769.4-201ENSMUST00000228166 901 ntBASIC16.3■□□□□ 0.2
Sox6P40645 1110004E09Rik-201ENSMUST00000023694 1143 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Sox6P40645 Antxr2-201ENSMUST00000031281 5656 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Sox6P40645 Aamp-201ENSMUST00000006462 1817 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
Sox6P40645 Fosl2-201ENSMUST00000031017 6537 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Sox6P40645 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Sox6P40645 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
Sox6P40645 Gm43808-201ENSMUST00000202534 2065 ntBASIC16.3■□□□□ 0.2
Sox6P40645 B4galnt4-201ENSMUST00000048002 3556 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Sox6P40645 Bhlhe41-201ENSMUST00000032386 6133 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Sox6P40645 Mon1a-201ENSMUST00000035202 2042 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Sox6P40645 C230012O17Rik-201ENSMUST00000130085 2999 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Sox6P40645 Gm43859-201ENSMUST00000200075 1412 ntBASIC16.29■□□□□ 0.2
Sox6P40645 Fam98a-201ENSMUST00000112507 2817 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Sox6P40645 Atxn7l2-204ENSMUST00000119650 2274 ntTSL 5 BASIC16.29■□□□□ 0.2
Sox6P40645 Abi1-215ENSMUST00000178908 2239 ntAPPRIS ALT1 TSL 5 BASIC16.29■□□□□ 0.2
Sox6P40645 Hnrnph1-201ENSMUST00000069304 2225 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Sox6P40645 Adcy5-201ENSMUST00000114913 7007 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Sox6P40645 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Sox6P40645 Wscd2-201ENSMUST00000094452 4302 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Sox6P40645 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Sox6P40645 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
Sox6P40645 B230208B08Rik-201ENSMUST00000173049 404 ntTSL 3 BASIC16.29■□□□□ 0.2
Sox6P40645 Ube2i-213ENSMUST00000174031 824 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Sox6P40645 Gm44672-201ENSMUST00000206944 1098 ntBASIC16.29■□□□□ 0.2
Sox6P40645 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
Sox6P40645 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
Sox6P40645 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Sox6P40645 Ifrd2-201ENSMUST00000010192 2056 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Sox6P40645 Slc8a3-202ENSMUST00000085238 4927 ntAPPRIS ALT1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Sox6P40645 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Sox6P40645 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Sox6P40645 Sgsm2-201ENSMUST00000057631 4743 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Sox6P40645 Usp32-202ENSMUST00000108075 7053 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
Sox6P40645 4930519A11Rik-201ENSMUST00000181381 1523 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Sox6P40645 Krt6a-201ENSMUST00000023788 2256 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Sox6P40645 Gjb3-201ENSMUST00000046532 1880 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Sox6P40645 Actr3-202ENSMUST00000178474 2565 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Sox6P40645 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Sox6P40645 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Sox6P40645 Cfap206-202ENSMUST00000108136 1688 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Sox6P40645 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Sox6P40645 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Sox6P40645 Celf1-201ENSMUST00000005643 4830 ntAPPRIS P4 TSL 5 BASIC16.28■□□□□ 0.2
Sox6P40645 Klhl29-201ENSMUST00000020958 7041 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Sox6P40645 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC16.28■□□□□ 0.2
Sox6P40645 Gm4968-201ENSMUST00000071458 858 ntBASIC16.28■□□□□ 0.2
Sox6P40645 Gnal-201ENSMUST00000025402 5616 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Sox6P40645 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Sox6P40645 Rasgrp1-207ENSMUST00000178884 5104 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Sox6P40645 Bcor-202ENSMUST00000065143 6839 ntAPPRIS P4 TSL 1 (best) BASIC16.28■□□□□ 0.2
Sox6P40645 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Sox6P40645 Rnf168-203ENSMUST00000171474 4460 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 38.4 ms