Protein–RNA interactions for Protein: P40240

Cd9, CD9 antigen, mousemouse

Predictions only

Length 226 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd9P40240 Vsig10l-204ENSMUST00000203769 2473 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Cd9P40240 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Cd9P40240 Cep68-204ENSMUST00000162811 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Cd9P40240 Zic1-202ENSMUST00000065360 2811 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Cd9P40240 Nfkbib-201ENSMUST00000032815 2061 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Cd9P40240 Gusb-202ENSMUST00000111307 932 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Cd9P40240 Gm26829-201ENSMUST00000180581 934 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Cd9P40240 Dctn3-201ENSMUST00000030158 973 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Cd9P40240 Ntpcr-201ENSMUST00000034313 1155 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Cd9P40240 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Cd9P40240 Gm16499-203ENSMUST00000204633 2177 ntBASIC17.1■□□□□ 0.33
Cd9P40240 Gpat3-203ENSMUST00000112887 3059 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Cd9P40240 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC17.1■□□□□ 0.33
Cd9P40240 Msx2-201ENSMUST00000021922 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Cd9P40240 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
Cd9P40240 Dpep3-201ENSMUST00000034371 1698 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Cd9P40240 Ecel1-204ENSMUST00000161002 3033 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Cd9P40240 Card10-203ENSMUST00000170584 3220 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
Cd9P40240 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
Cd9P40240 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Cd9P40240 Adra2a-201ENSMUST00000036700 3801 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
Cd9P40240 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Cd9P40240 Nsmf-202ENSMUST00000074422 2824 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Cd9P40240 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Cd9P40240 Rasl10b-202ENSMUST00000108140 3156 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
Cd9P40240 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Cd9P40240 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Cd9P40240 Utf1-201ENSMUST00000168457 1227 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Cd9P40240 Gm21863-201ENSMUST00000179133 336 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
Cd9P40240 Anapc13-204ENSMUST00000190279 589 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Cd9P40240 Impa1-204ENSMUST00000191670 1100 ntTSL 2 BASIC17.09■□□□□ 0.33
Cd9P40240 Gm37939-201ENSMUST00000192309 447 ntTSL 5 BASIC17.09■□□□□ 0.33
Cd9P40240 Gm38027-201ENSMUST00000192315 235 ntBASIC17.09■□□□□ 0.33
Cd9P40240 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC17.09■□□□□ 0.33
Cd9P40240 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC17.09■□□□□ 0.33
Cd9P40240 Sap30-201ENSMUST00000034022 1178 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Cd9P40240 Plpp1-202ENSMUST00000070951 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Cd9P40240 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC17.09■□□□□ 0.33
Cd9P40240 2310002F09Rik-201ENSMUST00000181454 1607 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Cd9P40240 Ctsh-201ENSMUST00000034915 1617 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Cd9P40240 Taf6l-201ENSMUST00000003777 1869 ntTSL 5 BASIC17.09■□□□□ 0.33
Cd9P40240 Car9-201ENSMUST00000030183 2023 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Cd9P40240 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Cd9P40240 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Cd9P40240 Sntg2-201ENSMUST00000021004 2411 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Cd9P40240 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
Cd9P40240 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.33
Cd9P40240 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Cd9P40240 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
Cd9P40240 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
Cd9P40240 Gm26548-201ENSMUST00000181165 2029 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
Cd9P40240 Carmn-201ENSMUST00000181155 1778 ntTSL 2 BASIC17.08■□□□□ 0.33
Cd9P40240 Cxcl14-202ENSMUST00000224801 1467 ntBASIC17.08■□□□□ 0.32
Cd9P40240 Gm9731-201ENSMUST00000209480 747 ntBASIC17.08■□□□□ 0.32
Cd9P40240 Il3ra-202ENSMUST00000223589 738 ntBASIC17.08■□□□□ 0.32
Cd9P40240 Tmem270-201ENSMUST00000047305 932 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Cd9P40240 Pusl1-201ENSMUST00000097737 1243 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
Cd9P40240 Epha10-201ENSMUST00000059343 2544 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Cd9P40240 Ets1-206ENSMUST00000184887 2107 ntTSL 5 BASIC17.08■□□□□ 0.32
Cd9P40240 Trip10-205ENSMUST00000224885 2136 ntAPPRIS ALT2 BASIC17.08■□□□□ 0.32
Cd9P40240 Slc35g1-201ENSMUST00000054098 3471 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Cd9P40240 Eral1-201ENSMUST00000021183 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Cd9P40240 Spata18-202ENSMUST00000071077 1978 ntAPPRIS P2 TSL 5 BASIC17.08■□□□□ 0.32
Cd9P40240 Sult2b1-204ENSMUST00000209739 1858 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
Cd9P40240 Trim45-202ENSMUST00000094048 1815 ntTSL 5 BASIC17.07■□□□□ 0.32
Cd9P40240 Appl2-201ENSMUST00000020500 3020 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Cd9P40240 Eepd1-201ENSMUST00000040677 2723 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Cd9P40240 Ffar3-201ENSMUST00000094583 1625 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Cd9P40240 Aig1-201ENSMUST00000019942 1439 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Cd9P40240 Pagr1a-202ENSMUST00000200948 1430 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Cd9P40240 Gm42742-205ENSMUST00000202798 1412 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Cd9P40240 Csf3-201ENSMUST00000038886 1413 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Cd9P40240 P2rx5-201ENSMUST00000006104 2395 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Cd9P40240 Gm45736-201ENSMUST00000210592 1352 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
Cd9P40240 Vac14-201ENSMUST00000034190 3069 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Cd9P40240 Zufsp-202ENSMUST00000218055 2180 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Cd9P40240 Rint1-204ENSMUST00000117783 560 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Cd9P40240 Gm13181-201ENSMUST00000120117 1069 ntBASIC17.07■□□□□ 0.32
Cd9P40240 Gm17098-201ENSMUST00000166507 628 ntTSL 5 BASIC17.07■□□□□ 0.32
Cd9P40240 Gm2990-201ENSMUST00000180662 1118 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Cd9P40240 Gm16042-201ENSMUST00000204813 1247 ntBASIC17.07■□□□□ 0.32
Cd9P40240 Sae1-203ENSMUST00000210999 1254 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Cd9P40240 Odf3b-204ENSMUST00000227834 930 ntBASIC17.07■□□□□ 0.32
Cd9P40240 Uchl1-201ENSMUST00000031131 1177 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Cd9P40240 Bmyc-201ENSMUST00000061483 983 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
Cd9P40240 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Cd9P40240 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
Cd9P40240 Dnajb2-208ENSMUST00000188346 1823 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Cd9P40240 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Cd9P40240 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Cd9P40240 Gmcl1-201ENSMUST00000001185 2949 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Cd9P40240 Etv5-201ENSMUST00000079601 3975 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Cd9P40240 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
Cd9P40240 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Cd9P40240 BC051019-202ENSMUST00000106735 1957 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Cd9P40240 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
Cd9P40240 Epo-203ENSMUST00000111039 706 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Cd9P40240 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC17.06■□□□□ 0.32
Cd9P40240 Ost4-201ENSMUST00000132034 576 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Cd9P40240 Tlx1os-201ENSMUST00000173437 620 ntTSL 3 BASIC17.06■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 23.9 ms