Protein–RNA interactions for Protein: P40224

Cxcl12, Stromal cell-derived factor 1, mousemouse

Predictions only

Length 93 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cxcl12P40224 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.46
Cxcl12P40224 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.46
Cxcl12P40224 Rilp-201ENSMUST00000042972 1489 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Cxcl12P40224 Arl11-201ENSMUST00000055159 1482 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Cxcl12P40224 Gm42922-201ENSMUST00000195887 2078 ntBASIC17.89■□□□□ 0.45
Cxcl12P40224 Cenpw-201ENSMUST00000099985 1532 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Cxcl12P40224 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Cxcl12P40224 Fbxo17-203ENSMUST00000108279 1563 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Cxcl12P40224 Rnf181-203ENSMUST00000114095 869 ntTSL 3 BASIC17.89■□□□□ 0.45
Cxcl12P40224 Lcn12-202ENSMUST00000114245 619 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Cxcl12P40224 Gm26549-201ENSMUST00000181112 1209 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Cxcl12P40224 Gm42802-201ENSMUST00000202475 456 ntTSL 2 BASIC17.89■□□□□ 0.45
Cxcl12P40224 Slc25a43-201ENSMUST00000047655 1111 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Cxcl12P40224 Stam2-202ENSMUST00000127316 1928 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Cxcl12P40224 Fam126a-202ENSMUST00000101513 1679 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Cxcl12P40224 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
Cxcl12P40224 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
Cxcl12P40224 Arpc5-201ENSMUST00000077755 1914 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Cxcl12P40224 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Cxcl12P40224 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Cxcl12P40224 Gm7935-201ENSMUST00000100555 1278 ntBASIC17.88■□□□□ 0.45
Cxcl12P40224 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
Cxcl12P40224 Gm15372-201ENSMUST00000120729 834 ntBASIC17.88■□□□□ 0.45
Cxcl12P40224 Gm19553-201ENSMUST00000175723 494 ntTSL 5 BASIC17.88■□□□□ 0.45
Cxcl12P40224 Rpsa-ps1-201ENSMUST00000191040 886 ntBASIC17.88■□□□□ 0.45
Cxcl12P40224 4930442P19Rik-201ENSMUST00000193163 1240 ntBASIC17.88■□□□□ 0.45
Cxcl12P40224 Rhoc-201ENSMUST00000002303 1202 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Cxcl12P40224 Rps4l-201ENSMUST00000071745 943 ntBASIC17.88■□□□□ 0.45
Cxcl12P40224 Slc25a3-206ENSMUST00000170810 1341 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
Cxcl12P40224 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC17.88■□□□□ 0.45
Cxcl12P40224 AW011738-201ENSMUST00000105140 1848 ntAPPRIS P1 BASIC17.88■□□□□ 0.45
Cxcl12P40224 Dynll2-202ENSMUST00000107923 2443 ntAPPRIS P1 TSL 3 BASIC17.88■□□□□ 0.45
Cxcl12P40224 Arhgap21-201ENSMUST00000114594 7351 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
Cxcl12P40224 Hpca-203ENSMUST00000116442 1568 ntAPPRIS P1 TSL 3 BASIC17.87■□□□□ 0.45
Cxcl12P40224 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC17.87■□□□□ 0.45
Cxcl12P40224 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
Cxcl12P40224 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
Cxcl12P40224 Gcat-202ENSMUST00000171999 1763 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Cxcl12P40224 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Cxcl12P40224 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Cxcl12P40224 Lat-206ENSMUST00000206793 1215 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
Cxcl12P40224 Hmgb1-rs17-201ENSMUST00000210634 972 ntBASIC17.87■□□□□ 0.45
Cxcl12P40224 Npw-202ENSMUST00000213213 531 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Cxcl12P40224 4933406B15Rik-201ENSMUST00000220065 1182 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Cxcl12P40224 AC161829.1-201ENSMUST00000220298 281 ntBASIC17.87■□□□□ 0.45
Cxcl12P40224 Sdhaf4-201ENSMUST00000027338 683 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Cxcl12P40224 1700037H04Rik-201ENSMUST00000028800 832 ntAPPRIS ALT1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Cxcl12P40224 Tbcc-201ENSMUST00000040434 1164 ntAPPRIS P1 BASIC17.87■□□□□ 0.45
Cxcl12P40224 Mrpl34-201ENSMUST00000048914 607 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Cxcl12P40224 Ifi27l2a-201ENSMUST00000055071 463 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Cxcl12P40224 Cd302-202ENSMUST00000074606 1354 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Cxcl12P40224 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Cxcl12P40224 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Cxcl12P40224 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Cxcl12P40224 Zbtb25-201ENSMUST00000167011 1681 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
Cxcl12P40224 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Cxcl12P40224 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Cxcl12P40224 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Cxcl12P40224 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Cxcl12P40224 Agfg1-206ENSMUST00000189220 8044 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Cxcl12P40224 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Cxcl12P40224 Dohh-202ENSMUST00000121047 946 ntTSL 2 BASIC17.86■□□□□ 0.45
Cxcl12P40224 Tecr-201ENSMUST00000019382 1158 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Cxcl12P40224 Vti1a-206ENSMUST00000225529 1244 ntBASIC17.86■□□□□ 0.45
Cxcl12P40224 Gnb2-203ENSMUST00000111023 1471 ntTSL 5 BASIC17.86■□□□□ 0.45
Cxcl12P40224 Haus4-201ENSMUST00000022784 1587 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Cxcl12P40224 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Cxcl12P40224 Tmem125-201ENSMUST00000060214 1864 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
Cxcl12P40224 Kcnd3-202ENSMUST00000098761 7169 ntAPPRIS ALT1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Cxcl12P40224 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Cxcl12P40224 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Cxcl12P40224 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Cxcl12P40224 Gm1401-201ENSMUST00000122048 772 ntBASIC17.85■□□□□ 0.45
Cxcl12P40224 Prss45-202ENSMUST00000146794 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Cxcl12P40224 Gm1818-201ENSMUST00000169406 1184 ntBASIC17.85■□□□□ 0.45
Cxcl12P40224 1700001G17Rik-201ENSMUST00000191779 889 ntBASIC17.85■□□□□ 0.45
Cxcl12P40224 Gm2213-201ENSMUST00000197485 688 ntBASIC17.85■□□□□ 0.45
Cxcl12P40224 Smim4-204ENSMUST00000203261 1219 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Cxcl12P40224 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Cxcl12P40224 AC138767.1-201ENSMUST00000222661 415 ntBASIC17.85■□□□□ 0.45
Cxcl12P40224 Ndufb7-201ENSMUST00000036996 623 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Cxcl12P40224 Hist1h1a-201ENSMUST00000055770 741 ntAPPRIS P1 BASIC17.85■□□□□ 0.45
Cxcl12P40224 Gal3st1-201ENSMUST00000063004 1879 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Cxcl12P40224 Gm9925-201ENSMUST00000066583 483 ntAPPRIS P1 BASIC17.85■□□□□ 0.45
Cxcl12P40224 Hist1h2ad-201ENSMUST00000090776 572 ntAPPRIS P1 BASIC17.85■□□□□ 0.45
Cxcl12P40224 Irgq-201ENSMUST00000049020 6083 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Cxcl12P40224 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC17.84■□□□□ 0.45
Cxcl12P40224 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Cxcl12P40224 Rad23a-202ENSMUST00000109761 1842 ntAPPRIS ALT1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Cxcl12P40224 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Cxcl12P40224 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC17.84■□□□□ 0.45
Cxcl12P40224 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Cxcl12P40224 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Cxcl12P40224 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC17.84■□□□□ 0.45
Cxcl12P40224 Gm6277-202ENSMUST00000224036 2779 ntBASIC17.84■□□□□ 0.45
Cxcl12P40224 Dnajc24-201ENSMUST00000102555 1197 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Cxcl12P40224 Klk12-202ENSMUST00000107970 1115 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
Cxcl12P40224 Gm11336-201ENSMUST00000118168 334 ntBASIC17.84■□□□□ 0.45
Cxcl12P40224 Gm12644-201ENSMUST00000119935 606 ntBASIC17.84■□□□□ 0.45
Cxcl12P40224 Rps27l-203ENSMUST00000127896 575 ntTSL 5 BASIC17.84■□□□□ 0.45
Retrieved 100 of 76,532 protein–RNA pairs in 29.5 ms