Protein–RNA interactions for Protein: P29533

Vcam1, Vascular cell adhesion protein 1, mousemouse

Predictions only

Length 739 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vcam1P29533 Rasd1-201ENSMUST00000062405 1611 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Vcam1P29533 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
Vcam1P29533 Gm9103-201ENSMUST00000119371 405 ntBASIC20.03■□□□□ 0.8
Vcam1P29533 Piga-208ENSMUST00000208697 947 ntTSL 5 BASIC20.03■□□□□ 0.8
Vcam1P29533 Spout1-201ENSMUST00000100220 1805 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Vcam1P29533 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Vcam1P29533 AC125311.2-201ENSMUST00000227477 1940 ntBASIC20.03■□□□□ 0.8
Vcam1P29533 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
Vcam1P29533 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Vcam1P29533 Skp1a-203ENSMUST00000109072 1754 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
Vcam1P29533 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Vcam1P29533 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.8
Vcam1P29533 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
Vcam1P29533 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
Vcam1P29533 Ramp2-204ENSMUST00000129680 1178 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.8
Vcam1P29533 Mrps12-204ENSMUST00000171183 883 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.8
Vcam1P29533 Prss40-201ENSMUST00000047840 1275 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Vcam1P29533 Tmem35b-201ENSMUST00000094712 1120 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.8
Vcam1P29533 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.79
Vcam1P29533 Fam222a-201ENSMUST00000043650 2930 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Vcam1P29533 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.79
Vcam1P29533 Igsf23-201ENSMUST00000043440 1908 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.79
Vcam1P29533 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC20.02■□□□□ 0.79
Vcam1P29533 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Vcam1P29533 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Vcam1P29533 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Vcam1P29533 Gm11860-201ENSMUST00000122346 1010 ntBASIC20.01■□□□□ 0.79
Vcam1P29533 Pld6-202ENSMUST00000125307 948 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Vcam1P29533 Gfod2-203ENSMUST00000155038 951 ntTSL 2 BASIC20.01■□□□□ 0.79
Vcam1P29533 Surf1-201ENSMUST00000015934 1173 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Vcam1P29533 Tctex1d4-201ENSMUST00000062206 990 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Vcam1P29533 Wnt10b-207ENSMUST00000228594 1510 ntAPPRIS P1 BASIC20.01■□□□□ 0.79
Vcam1P29533 Gcat-202ENSMUST00000171999 1763 ntTSL 1 (best) BASIC20■□□□□ 0.79
Vcam1P29533 Tmed4-201ENSMUST00000004508 2003 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Vcam1P29533 P2ry2-204ENSMUST00000207916 2372 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Vcam1P29533 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
Vcam1P29533 Gm5953-201ENSMUST00000220644 2616 ntBASIC20■□□□□ 0.79
Vcam1P29533 Dexi-203ENSMUST00000184863 2537 ntAPPRIS P1 TSL 2 BASIC20■□□□□ 0.79
Vcam1P29533 Gpha2-202ENSMUST00000113526 762 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
Vcam1P29533 Mocs1-202ENSMUST00000165390 729 ntTSL 1 (best) BASIC20■□□□□ 0.79
Vcam1P29533 Gm37722-201ENSMUST00000193757 208 ntBASIC20■□□□□ 0.79
Vcam1P29533 Flt3l-206ENSMUST00000210197 834 ntAPPRIS ALT2 TSL 5 BASIC20■□□□□ 0.79
Vcam1P29533 Gpha2-201ENSMUST00000025698 609 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Vcam1P29533 C1qbp-201ENSMUST00000078528 1175 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Vcam1P29533 Podxl2-201ENSMUST00000038409 1994 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
Vcam1P29533 Lrriq4-203ENSMUST00000172350 1797 ntAPPRIS P3 TSL 5 BASIC20■□□□□ 0.79
Vcam1P29533 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC20■□□□□ 0.79
Vcam1P29533 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Vcam1P29533 Abhd5-202ENSMUST00000111497 2576 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Vcam1P29533 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Vcam1P29533 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Vcam1P29533 Hikeshi-206ENSMUST00000153470 2224 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Vcam1P29533 Ccnd3-202ENSMUST00000171031 2113 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
Vcam1P29533 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC19.99■□□□□ 0.79
Vcam1P29533 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
Vcam1P29533 Snhg10-202ENSMUST00000222812 527 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Vcam1P29533 Pafah1b3-201ENSMUST00000005583 901 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Vcam1P29533 Nr1h2-213ENSMUST00000167197 1944 ntAPPRIS P3 TSL 5 BASIC19.99■□□□□ 0.79
Vcam1P29533 Adam15-203ENSMUST00000107446 1686 ntTSL 5 BASIC19.99■□□□□ 0.79
Vcam1P29533 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC19.99■□□□□ 0.79
Vcam1P29533 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
Vcam1P29533 Zdhhc6-207ENSMUST00000224897 2168 ntAPPRIS P1 BASIC19.98■□□□□ 0.79
Vcam1P29533 Sfrp4-201ENSMUST00000002883 1764 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Vcam1P29533 Adpgk-205ENSMUST00000217570 2484 ntAPPRIS P2 TSL 1 (best) BASIC19.98■□□□□ 0.79
Vcam1P29533 Hmg20b-204ENSMUST00000122993 1502 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Vcam1P29533 Urah-202ENSMUST00000106050 719 ntAPPRIS ALT2 TSL 2 BASIC19.98■□□□□ 0.79
Vcam1P29533 Fndc11-202ENSMUST00000108835 1154 ntAPPRIS P1 TSL 2 BASIC19.98■□□□□ 0.79
Vcam1P29533 Sap18-202ENSMUST00000111268 662 ntTSL 2 BASIC19.98■□□□□ 0.79
Vcam1P29533 Smim12-201ENSMUST00000142029 1022 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Vcam1P29533 Has3-202ENSMUST00000175987 1154 ntTSL 5 BASIC19.98■□□□□ 0.79
Vcam1P29533 Gm8797-201ENSMUST00000192045 490 ntAPPRIS P1 BASIC19.98■□□□□ 0.79
Vcam1P29533 Gm26709-203ENSMUST00000223260 715 ntTSL 5 BASIC19.98■□□□□ 0.79
Vcam1P29533 Nme3-201ENSMUST00000024978 715 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Vcam1P29533 Pou2f2-202ENSMUST00000108413 1599 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Vcam1P29533 Ptgis-202ENSMUST00000088041 1711 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Vcam1P29533 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Vcam1P29533 Stard6-201ENSMUST00000114959 1496 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Vcam1P29533 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
Vcam1P29533 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Vcam1P29533 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Vcam1P29533 4933427J07Rik-201ENSMUST00000156275 1533 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Vcam1P29533 Gpd1-203ENSMUST00000162194 1515 ntTSL 5 BASIC19.97■□□□□ 0.79
Vcam1P29533 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC19.97■□□□□ 0.79
Vcam1P29533 Mapre3-201ENSMUST00000031058 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Vcam1P29533 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Vcam1P29533 Sirt7-202ENSMUST00000106183 427 ntTSL 3 BASIC19.97■□□□□ 0.79
Vcam1P29533 Gm11950-201ENSMUST00000121615 838 ntBASIC19.97■□□□□ 0.79
Vcam1P29533 Psmg4-201ENSMUST00000124996 474 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Vcam1P29533 Yif1b-201ENSMUST00000032809 1111 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
Vcam1P29533 Tmem205-201ENSMUST00000046831 785 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Vcam1P29533 Fbxo36-201ENSMUST00000097672 901 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Vcam1P29533 4833445I07Rik-201ENSMUST00000193193 1642 ntBASIC19.97■□□□□ 0.79
Vcam1P29533 2810408A11Rik-204ENSMUST00000108621 1455 ntAPPRIS ALT2 TSL 5 BASIC19.97■□□□□ 0.79
Vcam1P29533 Smim3-201ENSMUST00000042710 1984 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Vcam1P29533 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC19.97■□□□□ 0.79
Vcam1P29533 4933402J07Rik-201ENSMUST00000093342 1304 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Vcam1P29533 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
Vcam1P29533 Tyk2-205ENSMUST00000214864 1662 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Vcam1P29533 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
Vcam1P29533 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
Retrieved 100 of 76,532 protein–RNA pairs in 21.7 ms