Protein–RNA interactions for Protein: P23440

Pde6b, Rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit beta, mousemouse

Predictions only

Length 856 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pde6bP23440 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Pde6bP23440 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Pde6bP23440 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC18.9■□□□□ 0.62
Pde6bP23440 Lgmn-201ENSMUST00000021607 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Pde6bP23440 Foxp4-204ENSMUST00000113265 3999 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Pde6bP23440 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
Pde6bP23440 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC18.9■□□□□ 0.62
Pde6bP23440 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Pde6bP23440 Tmem60-201ENSMUST00000115259 1147 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Pde6bP23440 Cldn18-203ENSMUST00000131922 860 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Pde6bP23440 Fbxo9-203ENSMUST00000159099 1201 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Pde6bP23440 4930544I03Rik-201ENSMUST00000181184 1276 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Pde6bP23440 D230030E09Rik-201ENSMUST00000222459 884 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Pde6bP23440 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Pde6bP23440 Igfbp2-201ENSMUST00000047328 1307 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Pde6bP23440 Ggt6-202ENSMUST00000100903 1387 ntTSL 5 BASIC18.9■□□□□ 0.62
Pde6bP23440 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC18.9■□□□□ 0.62
Pde6bP23440 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Pde6bP23440 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
Pde6bP23440 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
Pde6bP23440 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Pde6bP23440 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Pde6bP23440 Mir142hg-201ENSMUST00000123700 269 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Pde6bP23440 Gm6345-202ENSMUST00000180900 204 ntBASIC18.89■□□□□ 0.61
Pde6bP23440 Gm45442-201ENSMUST00000210038 411 ntTSL 3 BASIC18.89■□□□□ 0.61
Pde6bP23440 Rpl39l-201ENSMUST00000044103 805 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Pde6bP23440 Lce1h-201ENSMUST00000051521 706 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Pde6bP23440 Pcf11-201ENSMUST00000119954 5995 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Pde6bP23440 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Pde6bP23440 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Pde6bP23440 Gm37820-201ENSMUST00000194021 2147 ntBASIC18.89■□□□□ 0.61
Pde6bP23440 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Pde6bP23440 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Pde6bP23440 Frrs1l-201ENSMUST00000053681 6817 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Pde6bP23440 Tgds-204ENSMUST00000228543 1594 ntBASIC18.89■□□□□ 0.61
Pde6bP23440 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Pde6bP23440 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Pde6bP23440 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Pde6bP23440 1810043G02Rik-201ENSMUST00000105397 1818 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Pde6bP23440 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC18.88■□□□□ 0.61
Pde6bP23440 Nmnat3-203ENSMUST00000112938 848 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Pde6bP23440 Gm7638-201ENSMUST00000121348 967 ntBASIC18.88■□□□□ 0.61
Pde6bP23440 Gm16061-201ENSMUST00000122167 857 ntBASIC18.88■□□□□ 0.61
Pde6bP23440 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Pde6bP23440 Gm24841-201ENSMUST00000158676 357 ntBASIC18.88■□□□□ 0.61
Pde6bP23440 4930544D05Rik-204ENSMUST00000180052 755 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
Pde6bP23440 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
Pde6bP23440 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Pde6bP23440 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC18.88■□□□□ 0.61
Pde6bP23440 Pdlim5-211ENSMUST00000198381 1555 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
Pde6bP23440 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC18.88■□□□□ 0.61
Pde6bP23440 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC18.88■□□□□ 0.61
Pde6bP23440 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
Pde6bP23440 Blcap-201ENSMUST00000088494 2108 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Pde6bP23440 Nploc4-202ENSMUST00000103017 4025 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Pde6bP23440 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
Pde6bP23440 Spint2-202ENSMUST00000108236 1211 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Pde6bP23440 Acvr1c-204ENSMUST00000112608 1497 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
Pde6bP23440 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
Pde6bP23440 Pdia6-201ENSMUST00000057288 2175 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Pde6bP23440 Gfra4-202ENSMUST00000066958 783 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Pde6bP23440 Fgf9-202ENSMUST00000074654 1198 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Pde6bP23440 Scamp4-201ENSMUST00000079883 1804 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Pde6bP23440 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Pde6bP23440 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Pde6bP23440 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC18.86■□□□□ 0.61
Pde6bP23440 Obsl1-202ENSMUST00000113567 5679 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Pde6bP23440 Map3k7cl-201ENSMUST00000026700 1652 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Pde6bP23440 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Pde6bP23440 Lrp3-201ENSMUST00000118444 3877 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
Pde6bP23440 AA467197-202ENSMUST00000110512 751 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Pde6bP23440 Gm13401-201ENSMUST00000117074 291 ntBASIC18.86■□□□□ 0.61
Pde6bP23440 Gm14453-201ENSMUST00000139677 553 ntTSL 3 BASIC18.86■□□□□ 0.61
Pde6bP23440 Gm4217-201ENSMUST00000182243 1002 ntBASIC18.86■□□□□ 0.61
Pde6bP23440 Gm33142-201ENSMUST00000193913 867 ntBASIC18.86■□□□□ 0.61
Pde6bP23440 Efcab11-207ENSMUST00000223114 1122 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
Pde6bP23440 Rgcc-201ENSMUST00000022595 918 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Pde6bP23440 Gng11-201ENSMUST00000031670 919 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Pde6bP23440 Grcc10-201ENSMUST00000004389 863 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Pde6bP23440 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
Pde6bP23440 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Pde6bP23440 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Pde6bP23440 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Pde6bP23440 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Pde6bP23440 Pcdh7-201ENSMUST00000068110 5611 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
Pde6bP23440 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Pde6bP23440 Eif4g3-201ENSMUST00000058133 2663 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Pde6bP23440 Auh-201ENSMUST00000021913 1320 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Pde6bP23440 Praf2-201ENSMUST00000033489 1339 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Pde6bP23440 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Pde6bP23440 Gm13474-201ENSMUST00000122466 815 ntBASIC18.85■□□□□ 0.61
Pde6bP23440 Gm29791-202ENSMUST00000207888 369 ntBASIC18.85■□□□□ 0.61
Pde6bP23440 Lsm10-201ENSMUST00000055575 943 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Pde6bP23440 Tbpl1-201ENSMUST00000095794 1195 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Pde6bP23440 Plxnd1-201ENSMUST00000015511 6907 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Pde6bP23440 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Pde6bP23440 Dmtn-210ENSMUST00000228824 2377 ntBASIC18.85■□□□□ 0.61
Pde6bP23440 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC18.85■□□□□ 0.61
Pde6bP23440 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Pde6bP23440 Disc1-208ENSMUST00000122389 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Retrieved 100 of 76,532 protein–RNA pairs in 23.9 ms