Protein–RNA interactions for Protein: P12850

Cxcl1, Growth-regulated alpha protein, mousemouse

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cxcl1P12850 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Cxcl1P12850 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Cxcl1P12850 Tomm6-202ENSMUST00000113302 749 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Cxcl1P12850 Wdfy1-202ENSMUST00000113510 704 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Cxcl1P12850 Wdfy1-203ENSMUST00000113511 704 ntTSL 5 BASIC14.4□□□□□ -0.1
Cxcl1P12850 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Cxcl1P12850 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC14.4□□□□□ -0.1
Cxcl1P12850 Wdfy1-201ENSMUST00000048820 717 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Cxcl1P12850 Ltbp4-202ENSMUST00000108369 5377 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
Cxcl1P12850 Tor2a-201ENSMUST00000009707 1536 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Cxcl1P12850 Dusp4-201ENSMUST00000033930 2740 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Cxcl1P12850 Akap8l-201ENSMUST00000050214 2075 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Cxcl1P12850 Etv6-201ENSMUST00000081028 5545 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
Cxcl1P12850 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cxcl1P12850 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cxcl1P12850 Kat14-208ENSMUST00000147747 3299 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Cxcl1P12850 Sar1a-201ENSMUST00000020285 2613 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cxcl1P12850 Trim7-201ENSMUST00000046903 2161 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Cxcl1P12850 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cxcl1P12850 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
Cxcl1P12850 Gm13216-201ENSMUST00000117145 591 ntBASIC14.39□□□□□ -0.11
Cxcl1P12850 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC14.39□□□□□ -0.11
Cxcl1P12850 Gm26881-201ENSMUST00000180426 593 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Cxcl1P12850 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC14.39□□□□□ -0.11
Cxcl1P12850 Gm7291-201ENSMUST00000199147 382 ntBASIC14.39□□□□□ -0.11
Cxcl1P12850 D830036C21Rik-201ENSMUST00000207444 453 ntTSL 3 BASIC14.39□□□□□ -0.11
Cxcl1P12850 Uqcc2-201ENSMUST00000025045 500 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cxcl1P12850 Mrpl2-201ENSMUST00000002844 1031 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cxcl1P12850 Gm6365-201ENSMUST00000054711 744 ntBASIC14.39□□□□□ -0.11
Cxcl1P12850 Gm27029-201ENSMUST00000107257 1898 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
Cxcl1P12850 Phtf1-201ENSMUST00000055425 3060 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Cxcl1P12850 Slc6a8-204ENSMUST00000114467 2509 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cxcl1P12850 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
Cxcl1P12850 Mal-202ENSMUST00000028854 2778 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cxcl1P12850 1810013L24Rik-201ENSMUST00000023150 4066 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cxcl1P12850 Dzip3-202ENSMUST00000121869 5820 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
Cxcl1P12850 Srrm2-209ENSMUST00000190686 8864 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Cxcl1P12850 Tmem125-201ENSMUST00000060214 1864 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
Cxcl1P12850 Igsf8-201ENSMUST00000039506 2278 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cxcl1P12850 Arl2bp-202ENSMUST00000109527 1133 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Cxcl1P12850 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Cxcl1P12850 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC14.38□□□□□ -0.11
Cxcl1P12850 4933406B15Rik-201ENSMUST00000220065 1182 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Cxcl1P12850 Wnt10b-205ENSMUST00000226846 1204 ntBASIC14.38□□□□□ -0.11
Cxcl1P12850 Prrg2-201ENSMUST00000007981 1295 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cxcl1P12850 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cxcl1P12850 Atf6b-202ENSMUST00000173984 2315 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
Cxcl1P12850 Antxr2-202ENSMUST00000199088 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cxcl1P12850 Rhobtb2-201ENSMUST00000022665 5322 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cxcl1P12850 Zic3-202ENSMUST00000088629 1951 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Cxcl1P12850 Plekhh3-201ENSMUST00000043397 3056 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cxcl1P12850 Mmd-201ENSMUST00000004050 2677 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cxcl1P12850 Rhod-202ENSMUST00000117462 1495 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Cxcl1P12850 Eml1-203ENSMUST00000109860 4160 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cxcl1P12850 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Cxcl1P12850 Kdm5b-203ENSMUST00000112198 5413 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cxcl1P12850 Lonrf2-202ENSMUST00000147695 6932 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Cxcl1P12850 Ube3c-201ENSMUST00000049453 5048 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cxcl1P12850 Slc47a1-201ENSMUST00000010267 2639 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
Cxcl1P12850 Casp9-201ENSMUST00000030747 3897 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cxcl1P12850 Dnaaf3-201ENSMUST00000094897 2224 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cxcl1P12850 AW011738-201ENSMUST00000105140 1848 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
Cxcl1P12850 Lhfpl4-201ENSMUST00000162280 4762 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cxcl1P12850 Gm11841-201ENSMUST00000117060 1963 ntBASIC14.37□□□□□ -0.11
Cxcl1P12850 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC14.37□□□□□ -0.11
Cxcl1P12850 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Cxcl1P12850 Pdcd5-201ENSMUST00000118501 684 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cxcl1P12850 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC14.37□□□□□ -0.11
Cxcl1P12850 Gadd45b-201ENSMUST00000015456 1284 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cxcl1P12850 Mir2861-201ENSMUST00000175539 82 ntBASIC14.37□□□□□ -0.11
Cxcl1P12850 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cxcl1P12850 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC14.37□□□□□ -0.11
Cxcl1P12850 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Cxcl1P12850 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cxcl1P12850 Esyt2-205ENSMUST00000220816 4287 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cxcl1P12850 Zfp446-202ENSMUST00000108535 2594 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Cxcl1P12850 Tnfsf14-201ENSMUST00000005976 1859 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cxcl1P12850 Gm16499-203ENSMUST00000204633 2177 ntBASIC14.37□□□□□ -0.11
Cxcl1P12850 Nectin3-202ENSMUST00000023335 9116 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cxcl1P12850 Plppr5-202ENSMUST00000106473 4294 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Cxcl1P12850 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cxcl1P12850 Ankrd63-201ENSMUST00000104937 4861 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
Cxcl1P12850 Gm26580-201ENSMUST00000181002 2095 ntTSL 5 BASIC14.37□□□□□ -0.11
Cxcl1P12850 Eefsec-201ENSMUST00000165242 2679 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cxcl1P12850 Nsmf-203ENSMUST00000100334 2957 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Cxcl1P12850 Itgb4-205ENSMUST00000106461 6208 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Cxcl1P12850 Gm26803-201ENSMUST00000181705 2011 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Cxcl1P12850 Slc27a4-201ENSMUST00000080065 4054 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cxcl1P12850 Ddhd1-201ENSMUST00000051310 5012 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cxcl1P12850 Proc-201ENSMUST00000171765 1566 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Cxcl1P12850 Polr3e-203ENSMUST00000207481 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cxcl1P12850 Slc35e3-201ENSMUST00000079041 3489 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cxcl1P12850 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC14.36□□□□□ -0.11
Cxcl1P12850 Psmb5-201ENSMUST00000022803 899 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cxcl1P12850 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
Cxcl1P12850 Syt9-201ENSMUST00000073459 3817 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cxcl1P12850 Cd5-201ENSMUST00000025571 2069 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cxcl1P12850 Actr3-201ENSMUST00000027579 2554 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Cxcl1P12850 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cxcl1P12850 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 29.4 ms