Protein–RNA interactions for Protein: P04925

Prnp, Major prion protein, mousemouse

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PrnpP04925 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
PrnpP04925 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
PrnpP04925 Tm9sf2-203ENSMUST00000171318 1494 ntTSL 5 BASIC18.02■□□□□ 0.48
PrnpP04925 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
PrnpP04925 Rps27a-202ENSMUST00000102845 791 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
PrnpP04925 Mir770-201ENSMUST00000103252 94 ntBASIC18.02■□□□□ 0.48
PrnpP04925 C030037D09Rik-202ENSMUST00000136201 1216 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
PrnpP04925 Mir3081-201ENSMUST00000175305 84 ntBASIC18.02■□□□□ 0.48
PrnpP04925 Rbm4-203ENSMUST00000178615 1018 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
PrnpP04925 Tmem241-205ENSMUST00000209859 1426 ntAPPRIS P4 TSL 1 (best) BASIC18.02■□□□□ 0.48
PrnpP04925 AC122351.1-201ENSMUST00000220467 126 ntBASIC18.02■□□□□ 0.48
PrnpP04925 Upk3a-201ENSMUST00000023070 1106 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
PrnpP04925 Eva1c-201ENSMUST00000037539 1698 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
PrnpP04925 Il9r-204ENSMUST00000142396 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.47
PrnpP04925 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
PrnpP04925 Trp73-203ENSMUST00000105643 1916 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.47
PrnpP04925 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC18.02■□□□□ 0.47
PrnpP04925 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
PrnpP04925 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
PrnpP04925 Magix-201ENSMUST00000115695 1342 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
PrnpP04925 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC18.01■□□□□ 0.47
PrnpP04925 Lrrc75b-201ENSMUST00000051129 4601 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
PrnpP04925 Trim54-202ENSMUST00000202769 1408 ntAPPRIS ALT1 TSL 5 BASIC18.01■□□□□ 0.47
PrnpP04925 Gm35558-201ENSMUST00000222675 2219 ntBASIC18.01■□□□□ 0.47
PrnpP04925 Tfpt-202ENSMUST00000108641 1166 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
PrnpP04925 Gm7153-201ENSMUST00000117092 455 ntBASIC18.01■□□□□ 0.47
PrnpP04925 1500009L16Rik-201ENSMUST00000150459 1194 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
PrnpP04925 Gm27357-201ENSMUST00000183754 135 ntBASIC18.01■□□□□ 0.47
PrnpP04925 Nudt21-204ENSMUST00000212981 1184 ntTSL 3 BASIC18.01■□□□□ 0.47
PrnpP04925 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
PrnpP04925 Gm26697-201ENSMUST00000180898 1760 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
PrnpP04925 Gm19721-201ENSMUST00000195284 1764 ntBASIC18.01■□□□□ 0.47
PrnpP04925 Klhl33-201ENSMUST00000164415 1602 ntTSL 5 BASIC18.01■□□□□ 0.47
PrnpP04925 Klhdc8b-214ENSMUST00000195435 1612 ntTSL 5 BASIC18.01■□□□□ 0.47
PrnpP04925 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC18.01■□□□□ 0.47
PrnpP04925 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC18.01■□□□□ 0.47
PrnpP04925 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
PrnpP04925 Ptgis-202ENSMUST00000088041 1711 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
PrnpP04925 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
PrnpP04925 Aqp5-202ENSMUST00000169082 1551 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
PrnpP04925 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
PrnpP04925 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
PrnpP04925 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC18■□□□□ 0.47
PrnpP04925 Tpm2-203ENSMUST00000107914 1164 ntAPPRIS ALT1 TSL 1 (best) BASIC18■□□□□ 0.47
PrnpP04925 Fgf8-205ENSMUST00000111927 843 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
PrnpP04925 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
PrnpP04925 Gm27742-201ENSMUST00000184667 60 ntBASIC18■□□□□ 0.47
PrnpP04925 Gm45328-201ENSMUST00000210942 917 ntBASIC18■□□□□ 0.47
PrnpP04925 Otx2os1-206ENSMUST00000228153 787 ntBASIC18■□□□□ 0.47
PrnpP04925 BC049762-201ENSMUST00000054226 760 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
PrnpP04925 Rln3-201ENSMUST00000061923 634 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
PrnpP04925 4833445I07Rik-201ENSMUST00000193193 1642 ntBASIC18■□□□□ 0.47
PrnpP04925 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC18■□□□□ 0.47
PrnpP04925 Mfhas1-201ENSMUST00000037666 6408 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
PrnpP04925 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
PrnpP04925 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
PrnpP04925 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
PrnpP04925 AC154855.1-201ENSMUST00000227353 1458 ntBASIC18■□□□□ 0.47
PrnpP04925 Pou2f2-202ENSMUST00000108413 1599 ntTSL 1 (best) BASIC18■□□□□ 0.47
PrnpP04925 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
PrnpP04925 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
PrnpP04925 Tgds-201ENSMUST00000022727 1682 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
PrnpP04925 Tnfrsf25-201ENSMUST00000025706 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
PrnpP04925 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
PrnpP04925 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC17.99■□□□□ 0.47
PrnpP04925 Gm15890-201ENSMUST00000161024 770 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
PrnpP04925 Umpk-ps-201ENSMUST00000211897 827 ntBASIC17.99■□□□□ 0.47
PrnpP04925 Spem1-201ENSMUST00000045771 1041 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
PrnpP04925 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC17.99■□□□□ 0.47
PrnpP04925 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC17.99■□□□□ 0.47
PrnpP04925 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
PrnpP04925 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC17.99■□□□□ 0.47
PrnpP04925 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
PrnpP04925 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
PrnpP04925 Gpsm3-201ENSMUST00000038244 1343 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
PrnpP04925 Irgq-201ENSMUST00000049020 6083 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
PrnpP04925 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
PrnpP04925 Stam2-202ENSMUST00000127316 1928 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
PrnpP04925 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
PrnpP04925 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC17.98■□□□□ 0.47
PrnpP04925 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
PrnpP04925 Gzmm-201ENSMUST00000020549 1287 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
PrnpP04925 Rpl13a-204ENSMUST00000209711 495 ntTSL 3 BASIC17.98■□□□□ 0.47
PrnpP04925 Odf3b-201ENSMUST00000049968 1040 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
PrnpP04925 Prima1-201ENSMUST00000074416 909 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
PrnpP04925 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
PrnpP04925 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
PrnpP04925 Neurl1b-201ENSMUST00000053020 6195 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
PrnpP04925 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
PrnpP04925 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC17.98■□□□□ 0.47
PrnpP04925 Rasd1-201ENSMUST00000062405 1611 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
PrnpP04925 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
PrnpP04925 Spg21-202ENSMUST00000213957 1302 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
PrnpP04925 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
PrnpP04925 Adgra2-201ENSMUST00000033876 5760 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
PrnpP04925 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
PrnpP04925 Tyk2-205ENSMUST00000214864 1662 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
PrnpP04925 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC17.97■□□□□ 0.47
PrnpP04925 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
PrnpP04925 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Retrieved 100 of 76,532 protein–RNA pairs in 42.8 ms