Protein–RNA interactions for Protein: P01758

Igh-VJ558, Ig heavy chain V region 108A, mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igh-VJ558P01758 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
Igh-VJ558P01758 Cacng6-202ENSMUST00000183200 1977 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Igh-VJ558P01758 Sertad4-204ENSMUST00000155579 3350 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Igh-VJ558P01758 Ppan-201ENSMUST00000004203 1670 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Igh-VJ558P01758 Tm7sf2-202ENSMUST00000113543 1498 ntTSL 1 (best) BASIC15.02■□□□□ -0
Igh-VJ558P01758 4833418N02Rik-202ENSMUST00000146560 1495 ntTSL 1 (best) BASIC15.02■□□□□ -0
Igh-VJ558P01758 Ntng1-204ENSMUST00000106571 1446 ntTSL 5 BASIC15.02■□□□□ -0
Igh-VJ558P01758 Capg-202ENSMUST00000114071 1400 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Igh-VJ558P01758 Ntng1-210ENSMUST00000138953 1443 ntTSL 1 (best) BASIC15.02■□□□□ -0
Igh-VJ558P01758 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC15.02■□□□□ -0
Igh-VJ558P01758 Tfap2a-209ENSMUST00000225180 1828 ntBASIC15.02■□□□□ -0
Igh-VJ558P01758 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Igh-VJ558P01758 Unc50-203ENSMUST00000118059 1179 ntAPPRIS P1 TSL 5 BASIC15.02■□□□□ -0
Igh-VJ558P01758 Serf1-204ENSMUST00000151821 570 ntTSL 2 BASIC15.02■□□□□ -0
Igh-VJ558P01758 Gm24841-201ENSMUST00000158676 357 ntBASIC15.02■□□□□ -0
Igh-VJ558P01758 E030044B06Rik-201ENSMUST00000181195 1266 ntTSL 1 (best) BASIC15.02■□□□□ -0
Igh-VJ558P01758 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC15.02■□□□□ -0
Igh-VJ558P01758 Theg-202ENSMUST00000077433 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
Igh-VJ558P01758 Prss56-201ENSMUST00000044533 2180 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Igh-VJ558P01758 Raver2-201ENSMUST00000038463 4045 ntAPPRIS P2 TSL 1 (best) BASIC15.02□□□□□ -0.01
Igh-VJ558P01758 Klf14-201ENSMUST00000101589 3056 ntAPPRIS P1 BASIC15.02□□□□□ -0.01
Igh-VJ558P01758 Il17re-208ENSMUST00000204774 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
Igh-VJ558P01758 Arhgef16-201ENSMUST00000030898 2860 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Igh-VJ558P01758 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
Igh-VJ558P01758 Rps6ka1-202ENSMUST00000105894 3135 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Igh-VJ558P01758 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Igh-VJ558P01758 AC124581.1-201ENSMUST00000225416 1399 ntBASIC15.01□□□□□ -0.01
Igh-VJ558P01758 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC15.01□□□□□ -0.01
Igh-VJ558P01758 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Igh-VJ558P01758 Cep68-204ENSMUST00000162811 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Igh-VJ558P01758 Acot8-202ENSMUST00000103094 1152 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Igh-VJ558P01758 2900072N19Rik-201ENSMUST00000123840 806 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Igh-VJ558P01758 Acot8-201ENSMUST00000017451 1055 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Igh-VJ558P01758 Matk-202ENSMUST00000117488 1980 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
Igh-VJ558P01758 Rpf1-203ENSMUST00000199079 1978 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Igh-VJ558P01758 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Igh-VJ558P01758 Sars2-201ENSMUST00000094632 1868 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Igh-VJ558P01758 Ttyh3-202ENSMUST00000197452 4576 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Igh-VJ558P01758 Zufsp-202ENSMUST00000218055 2180 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Igh-VJ558P01758 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC15.01□□□□□ -0.01
Igh-VJ558P01758 Acss2-201ENSMUST00000029135 2931 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Igh-VJ558P01758 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Igh-VJ558P01758 Fbxo7-203ENSMUST00000120344 1655 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
Igh-VJ558P01758 Eml2-203ENSMUST00000120595 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
Igh-VJ558P01758 Taf6l-205ENSMUST00000176496 2224 ntTSL 1 (best) BASIC15□□□□□ -0.01
Igh-VJ558P01758 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC15□□□□□ -0.01
Igh-VJ558P01758 Nrbp1-201ENSMUST00000031034 2203 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Igh-VJ558P01758 Enah-205ENSMUST00000177811 4231 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
Igh-VJ558P01758 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC15□□□□□ -0.01
Igh-VJ558P01758 Atp5g1-203ENSMUST00000107686 691 ntAPPRIS P1 TSL 3 BASIC15□□□□□ -0.01
Igh-VJ558P01758 Gm20760-201ENSMUST00000179197 648 ntBASIC15□□□□□ -0.01
Igh-VJ558P01758 Sharpin-201ENSMUST00000023211 1734 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Igh-VJ558P01758 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Igh-VJ558P01758 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC15□□□□□ -0.01
Igh-VJ558P01758 Pick1-206ENSMUST00000166155 1699 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Igh-VJ558P01758 Hist1h2bh-201ENSMUST00000224359 1679 ntAPPRIS P1 BASIC15□□□□□ -0.01
Igh-VJ558P01758 Trp73-203ENSMUST00000105643 1916 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
Igh-VJ558P01758 Cacul1-201ENSMUST00000081790 5790 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
Igh-VJ558P01758 Zbtb5-204ENSMUST00000180217 4708 ntAPPRIS P1 TSL 2 BASIC15□□□□□ -0.01
Igh-VJ558P01758 Aspscr1-204ENSMUST00000106159 1615 ntTSL 5 BASIC14.99□□□□□ -0.01
Igh-VJ558P01758 Klhl33-201ENSMUST00000164415 1602 ntTSL 5 BASIC14.99□□□□□ -0.01
Igh-VJ558P01758 Vrk2-201ENSMUST00000078362 1889 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Igh-VJ558P01758 Nfkbib-201ENSMUST00000032815 2061 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Igh-VJ558P01758 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Igh-VJ558P01758 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Igh-VJ558P01758 Psmd4-202ENSMUST00000107237 1332 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
Igh-VJ558P01758 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC14.99□□□□□ -0.01
Igh-VJ558P01758 Tbx21-201ENSMUST00000001484 2488 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Igh-VJ558P01758 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC14.99□□□□□ -0.01
Igh-VJ558P01758 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC14.99□□□□□ -0.01
Igh-VJ558P01758 Gm13816-201ENSMUST00000152230 715 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Igh-VJ558P01758 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Igh-VJ558P01758 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC14.99□□□□□ -0.01
Igh-VJ558P01758 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC14.99□□□□□ -0.01
Igh-VJ558P01758 Vgf-201ENSMUST00000041543 2553 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Igh-VJ558P01758 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Igh-VJ558P01758 Cerkl-205ENSMUST00000143974 1623 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Igh-VJ558P01758 Spi1-201ENSMUST00000002180 2034 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Igh-VJ558P01758 Msmo1-201ENSMUST00000034015 2044 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Igh-VJ558P01758 Acss2-202ENSMUST00000065973 2876 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Igh-VJ558P01758 Cisd2-202ENSMUST00000120988 1363 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Igh-VJ558P01758 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Igh-VJ558P01758 Eif2b5-201ENSMUST00000003320 3186 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Igh-VJ558P01758 Adrb3-202ENSMUST00000117565 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Igh-VJ558P01758 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Igh-VJ558P01758 Tmtc4-209ENSMUST00000148661 2719 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Igh-VJ558P01758 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Igh-VJ558P01758 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
Igh-VJ558P01758 Mrpl13-205ENSMUST00000172387 1223 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Igh-VJ558P01758 Sox15-201ENSMUST00000047373 861 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Igh-VJ558P01758 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Igh-VJ558P01758 Nsun5-201ENSMUST00000000940 2243 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Igh-VJ558P01758 Gm26548-201ENSMUST00000181165 2029 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Igh-VJ558P01758 Car9-201ENSMUST00000030183 2023 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Igh-VJ558P01758 Fbxo33-201ENSMUST00000043204 3688 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Igh-VJ558P01758 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Igh-VJ558P01758 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC14.98□□□□□ -0.01
Igh-VJ558P01758 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC14.98□□□□□ -0.01
Igh-VJ558P01758 Ddhd2-206ENSMUST00000211688 2265 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Igh-VJ558P01758 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 33.9 ms