Protein–RNA interactions for Protein: P01734

T-cell receptor beta chain V region 3H.25, mousemouse

Predictions only

Length 135 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P01734 Csf3-201ENSMUST00000038886 1413 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
P01734 Ets1-206ENSMUST00000184887 2107 ntTSL 5 BASIC18.91■□□□□ 0.62
P01734 Nespas-203ENSMUST00000151472 2248 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
P01734 Gm14968-201ENSMUST00000155528 769 ntTSL 3 BASIC18.91■□□□□ 0.62
P01734 Ddah2-204ENSMUST00000174493 1254 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
P01734 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC18.91■□□□□ 0.62
P01734 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
P01734 Mfsd13a-201ENSMUST00000086969 2278 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
P01734 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC18.91■□□□□ 0.62
P01734 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
P01734 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC18.91■□□□□ 0.62
P01734 Zar1-201ENSMUST00000073528 1429 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
P01734 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
P01734 4930519A11Rik-201ENSMUST00000181381 1523 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
P01734 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
P01734 Zfp64-202ENSMUST00000109161 1009 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
P01734 Slc25a41-202ENSMUST00000169012 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
P01734 Cnih3-204ENSMUST00000209607 564 ntTSL 5 BASIC18.9■□□□□ 0.62
P01734 Stk11-210ENSMUST00000213772 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
P01734 Rprml-201ENSMUST00000057870 1010 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
P01734 Prps1l3-201ENSMUST00000139049 1720 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
P01734 Tbx3os2-201ENSMUST00000135385 1345 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
P01734 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC18.9■□□□□ 0.62
P01734 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC18.9■□□□□ 0.62
P01734 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC18.9■□□□□ 0.62
P01734 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
P01734 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
P01734 1700096K18Rik-201ENSMUST00000188465 1454 ntBASIC18.9■□□□□ 0.62
P01734 Aurkb-201ENSMUST00000021277 1950 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
P01734 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.62
P01734 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.62
P01734 Tgds-201ENSMUST00000022727 1682 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
P01734 Zcchc6-207ENSMUST00000225576 2499 ntBASIC18.89■□□□□ 0.61
P01734 Gm43182-201ENSMUST00000199476 2528 ntBASIC18.89■□□□□ 0.61
P01734 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
P01734 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC18.89■□□□□ 0.61
P01734 Tnnt2-202ENSMUST00000112085 1076 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.61
P01734 Tnnt2-203ENSMUST00000112086 1094 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.61
P01734 Tnnt2-204ENSMUST00000112087 1112 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.61
P01734 Gm11973-203ENSMUST00000155498 867 ntTSL 3 BASIC18.89■□□□□ 0.61
P01734 Tpsg1-202ENSMUST00000160377 1040 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
P01734 Tnnt2-206ENSMUST00000178854 1076 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.61
P01734 Gm27463-201ENSMUST00000183569 57 ntBASIC18.89■□□□□ 0.61
P01734 Tnnt2-211ENSMUST00000189355 1112 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.61
P01734 Tnnt2-212ENSMUST00000189732 1123 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.61
P01734 Gm43353-201ENSMUST00000199224 1295 ntBASIC18.89■□□□□ 0.61
P01734 1700025A08Rik-201ENSMUST00000200753 609 ntBASIC18.89■□□□□ 0.61
P01734 Gm45618-201ENSMUST00000209890 660 ntAPPRIS P1 BASIC18.89■□□□□ 0.61
P01734 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
P01734 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.61
P01734 Gm45623-201ENSMUST00000210744 1457 ntAPPRIS P1 BASIC18.89■□□□□ 0.61
P01734 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC18.89■□□□□ 0.61
P01734 Gm45844-202ENSMUST00000209325 2450 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
P01734 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
P01734 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC18.88■□□□□ 0.61
P01734 Podxl2-201ENSMUST00000038409 1994 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
P01734 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC18.88■□□□□ 0.61
P01734 Pea15a-202ENSMUST00000111247 2435 ntTSL 3 BASIC18.88■□□□□ 0.61
P01734 Dcxr-202ENSMUST00000106148 830 ntTSL 2 BASIC18.88■□□□□ 0.61
P01734 Nmnat3-203ENSMUST00000112938 848 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
P01734 Slc25a51-203ENSMUST00000132815 1005 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
P01734 AC122465.1-201ENSMUST00000220813 1209 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
P01734 Zfpl1-201ENSMUST00000025707 1287 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
P01734 Nudt8-202ENSMUST00000025802 787 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
P01734 Prdx5-201ENSMUST00000025904 1262 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
P01734 Gm9987-201ENSMUST00000069768 567 ntBASIC18.88■□□□□ 0.61
P01734 Psmd4-201ENSMUST00000071664 1276 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
P01734 4933428P19Rik-201ENSMUST00000199616 1376 ntBASIC18.88■□□□□ 0.61
P01734 Gm19721-201ENSMUST00000195284 1764 ntBASIC18.88■□□□□ 0.61
P01734 AC125311.2-201ENSMUST00000227477 1940 ntBASIC18.88■□□□□ 0.61
P01734 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC18.88■□□□□ 0.61
P01734 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
P01734 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
P01734 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
P01734 Agbl4-205ENSMUST00000106591 1406 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
P01734 Ocel1-202ENSMUST00000110051 2179 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
P01734 Gm6433-201ENSMUST00000118634 875 ntBASIC18.87■□□□□ 0.61
P01734 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC18.87■□□□□ 0.61
P01734 4833413E03Rik-201ENSMUST00000013706 1091 ntTSL 5 BASIC18.87■□□□□ 0.61
P01734 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
P01734 Comtd1-204ENSMUST00000177527 714 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
P01734 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
P01734 Gm26938-201ENSMUST00000182839 744 ntAPPRIS P1 TSL 3 BASIC18.87■□□□□ 0.61
P01734 Cmc1-202ENSMUST00000215799 531 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
P01734 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
P01734 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
P01734 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
P01734 Tle4-201ENSMUST00000052011 4555 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
P01734 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC18.86■□□□□ 0.61
P01734 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
P01734 Igsf23-201ENSMUST00000043440 1908 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
P01734 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
P01734 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
P01734 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
P01734 Abhd11-206ENSMUST00000154469 1473 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
P01734 Gm8668-201ENSMUST00000120559 1447 ntBASIC18.86■□□□□ 0.61
P01734 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
P01734 Dnajb3-201ENSMUST00000119972 1051 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
P01734 Gm7791-201ENSMUST00000219066 539 ntBASIC18.86■□□□□ 0.61
P01734 AC158538.1-201ENSMUST00000225870 294 ntBASIC18.86■□□□□ 0.61
Retrieved 100 of 76,532 protein–RNA pairs in 49.9 ms