Protein–RNA interactions for Protein: O89079

Cope, Coatomer subunit epsilon, mousemouse

Predictions only

Length 308 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CopeO89079 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
CopeO89079 Arf1-202ENSMUST00000163300 1991 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CopeO89079 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
CopeO89079 Agpat3-203ENSMUST00000105388 3681 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
CopeO89079 Atp5d-203ENSMUST00000105367 1410 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
CopeO89079 Tead3-205ENSMUST00000154873 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.46
CopeO89079 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
CopeO89079 Clcn2-202ENSMUST00000120099 2812 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
CopeO89079 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CopeO89079 Dhx32-201ENSMUST00000033290 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CopeO89079 Txnl4b-201ENSMUST00000034159 1890 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CopeO89079 Crebzf-201ENSMUST00000061767 3376 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
CopeO89079 Sh3glb1-202ENSMUST00000198254 5945 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
CopeO89079 Kcnab3-201ENSMUST00000018614 2538 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CopeO89079 Adgrl1-205ENSMUST00000132500 5719 ntTSL 5 BASIC17.95■□□□□ 0.46
CopeO89079 Dusp15-202ENSMUST00000109811 753 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
CopeO89079 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
CopeO89079 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
CopeO89079 Gadd45b-201ENSMUST00000015456 1284 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CopeO89079 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC17.95■□□□□ 0.46
CopeO89079 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
CopeO89079 Gm42642-201ENSMUST00000200683 355 ntBASIC17.95■□□□□ 0.46
CopeO89079 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
CopeO89079 Psmb5-201ENSMUST00000022803 899 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CopeO89079 Gm6365-201ENSMUST00000054711 744 ntBASIC17.95■□□□□ 0.46
CopeO89079 Slit1-201ENSMUST00000025993 5045 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CopeO89079 Gm10649-203ENSMUST00000148066 1812 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
CopeO89079 Cacna1h-205ENSMUST00000159610 8230 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
CopeO89079 Cacna1h-201ENSMUST00000078496 8220 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
CopeO89079 Igsf11-201ENSMUST00000023478 3443 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CopeO89079 Yipf2-204ENSMUST00000213809 1883 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
CopeO89079 Arhgap42-203ENSMUST00000183182 1458 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
CopeO89079 Eral1-201ENSMUST00000021183 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CopeO89079 Cep104-201ENSMUST00000047497 5151 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CopeO89079 Ank1-209ENSMUST00000121802 8218 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
CopeO89079 Tor2a-201ENSMUST00000009707 1536 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CopeO89079 Neo1-201ENSMUST00000068664 7379 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
CopeO89079 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
CopeO89079 Gm43272-201ENSMUST00000200599 1584 ntBASIC17.94■□□□□ 0.46
CopeO89079 Gm16401-202ENSMUST00000197463 2074 ntBASIC17.94■□□□□ 0.46
CopeO89079 Kat14-208ENSMUST00000147747 3299 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
CopeO89079 Prrt4-201ENSMUST00000159200 3411 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CopeO89079 Cwh43-201ENSMUST00000031040 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CopeO89079 Snx11-202ENSMUST00000107661 2197 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CopeO89079 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
CopeO89079 Guca1b-202ENSMUST00000145462 1556 ntTSL 2 BASIC17.93■□□□□ 0.46
CopeO89079 Zfp668-203ENSMUST00000106262 3169 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CopeO89079 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
CopeO89079 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC17.93■□□□□ 0.46
CopeO89079 Gm7291-201ENSMUST00000199147 382 ntBASIC17.93■□□□□ 0.46
CopeO89079 Tbx18-201ENSMUST00000034991 4679 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CopeO89079 Lmtk2-201ENSMUST00000041804 8114 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CopeO89079 Nkpd1-201ENSMUST00000078908 2753 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
CopeO89079 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CopeO89079 Fam126a-202ENSMUST00000101513 1679 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
CopeO89079 Tlk1-201ENSMUST00000038584 4280 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CopeO89079 Kif5b-201ENSMUST00000025083 6032 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CopeO89079 Tmx1-201ENSMUST00000021471 2795 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CopeO89079 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
CopeO89079 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
CopeO89079 AV356131-201ENSMUST00000206201 750 ntBASIC17.92■□□□□ 0.46
CopeO89079 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC17.92■□□□□ 0.46
CopeO89079 Uqcc2-201ENSMUST00000025045 500 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CopeO89079 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CopeO89079 Zfp783-201ENSMUST00000095946 670 ntBASIC17.92■□□□□ 0.46
CopeO89079 Cct8-201ENSMUST00000026704 2394 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CopeO89079 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CopeO89079 Arhgap39-202ENSMUST00000077821 4494 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
CopeO89079 Zmynd15-203ENSMUST00000108563 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
CopeO89079 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CopeO89079 Inpp5f-201ENSMUST00000043138 4734 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CopeO89079 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
CopeO89079 Sfrp1-201ENSMUST00000033952 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CopeO89079 Gm45774-201ENSMUST00000211992 2665 ntBASIC17.92■□□□□ 0.46
CopeO89079 Aurkb-201ENSMUST00000021277 1950 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CopeO89079 Cdipt-201ENSMUST00000032920 1974 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CopeO89079 Zufsp-202ENSMUST00000218055 2180 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CopeO89079 C230012O17Rik-201ENSMUST00000130085 2999 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
CopeO89079 Rab11fip4-201ENSMUST00000017783 7156 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CopeO89079 Abi1-215ENSMUST00000178908 2239 ntAPPRIS ALT1 TSL 5 BASIC17.91■□□□□ 0.46
CopeO89079 Slc23a4-205ENSMUST00000201355 2003 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
CopeO89079 Gsk3b-201ENSMUST00000023507 8303 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
CopeO89079 Nhsl1-209ENSMUST00000207038 4854 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
CopeO89079 Foxq1-201ENSMUST00000042118 4843 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
CopeO89079 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CopeO89079 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC17.91■□□□□ 0.46
CopeO89079 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
CopeO89079 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC17.91■□□□□ 0.46
CopeO89079 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CopeO89079 9430097D07Rik-201ENSMUST00000100190 1501 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
CopeO89079 P2ry1-203ENSMUST00000193943 2203 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
CopeO89079 Znrf1-201ENSMUST00000095176 3108 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CopeO89079 Chmp2b-201ENSMUST00000004965 1838 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CopeO89079 Erlin1-201ENSMUST00000071698 3228 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
CopeO89079 Adam33-201ENSMUST00000052104 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
CopeO89079 Pitpnm1-201ENSMUST00000049658 4206 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CopeO89079 Bambi-201ENSMUST00000025075 5040 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CopeO89079 Mid2-202ENSMUST00000112990 6271 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
CopeO89079 Nfib-205ENSMUST00000107247 3267 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
CopeO89079 Sgsm1-204ENSMUST00000112325 2274 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Retrieved 100 of 76,532 protein–RNA pairs in 22.6 ms