Protein–RNA interactions for Protein: O88393

Tgfbr3, Transforming growth factor beta receptor type 3, mousemouse

Predictions only

Length 850 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tgfbr3O88393 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Tgfbr3O88393 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC16.5■□□□□ 0.23
Tgfbr3O88393 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Tgfbr3O88393 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Tgfbr3O88393 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Tgfbr3O88393 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Tgfbr3O88393 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Tgfbr3O88393 Fgf8-205ENSMUST00000111927 843 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Tgfbr3O88393 Gm7153-201ENSMUST00000117092 455 ntBASIC16.49■□□□□ 0.23
Tgfbr3O88393 Lamtor5-201ENSMUST00000145735 881 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Tgfbr3O88393 Atp6v0b-208ENSMUST00000150204 935 ntTSL 5 BASIC16.49■□□□□ 0.23
Tgfbr3O88393 Proc-201ENSMUST00000171765 1566 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
Tgfbr3O88393 Gm21057-201ENSMUST00000206022 670 ntTSL 3 BASIC16.49■□□□□ 0.23
Tgfbr3O88393 Tmem241-205ENSMUST00000209859 1426 ntAPPRIS P4 TSL 1 (best) BASIC16.49■□□□□ 0.23
Tgfbr3O88393 Umpk-ps-201ENSMUST00000211897 827 ntBASIC16.49■□□□□ 0.23
Tgfbr3O88393 Nme3-201ENSMUST00000024978 715 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Tgfbr3O88393 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Tgfbr3O88393 Krt13-201ENSMUST00000007275 1654 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Tgfbr3O88393 Actl10-201ENSMUST00000104928 1501 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
Tgfbr3O88393 Actl10-202ENSMUST00000226583 1501 ntBASIC16.49■□□□□ 0.23
Tgfbr3O88393 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Tgfbr3O88393 Gpsm3-201ENSMUST00000038244 1343 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Tgfbr3O88393 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Tgfbr3O88393 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Tgfbr3O88393 Aqp5-202ENSMUST00000169082 1551 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Tgfbr3O88393 Rps27a-202ENSMUST00000102845 791 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Tgfbr3O88393 Srpx-202ENSMUST00000115543 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Tgfbr3O88393 Echdc2-203ENSMUST00000116307 893 ntTSL 5 BASIC16.48■□□□□ 0.23
Tgfbr3O88393 Gm11860-201ENSMUST00000122346 1010 ntBASIC16.48■□□□□ 0.23
Tgfbr3O88393 Cyp4f41-ps-201ENSMUST00000126790 1077 ntBASIC16.48■□□□□ 0.23
Tgfbr3O88393 Gm6623-201ENSMUST00000173570 544 ntBASIC16.48■□□□□ 0.23
Tgfbr3O88393 Mir3081-201ENSMUST00000175305 84 ntBASIC16.48■□□□□ 0.23
Tgfbr3O88393 Has3-202ENSMUST00000175987 1154 ntTSL 5 BASIC16.48■□□□□ 0.23
Tgfbr3O88393 Upk3a-201ENSMUST00000023070 1106 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Tgfbr3O88393 Fam213b-201ENSMUST00000030935 883 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Tgfbr3O88393 Pafah1b3-201ENSMUST00000005583 901 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Tgfbr3O88393 Tyk2-205ENSMUST00000214864 1662 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Tgfbr3O88393 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC16.48■□□□□ 0.23
Tgfbr3O88393 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Tgfbr3O88393 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC16.48■□□□□ 0.23
Tgfbr3O88393 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Tgfbr3O88393 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Tgfbr3O88393 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
Tgfbr3O88393 Ngrn-201ENSMUST00000117989 1317 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Tgfbr3O88393 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
Tgfbr3O88393 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Tgfbr3O88393 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Tgfbr3O88393 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
Tgfbr3O88393 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
Tgfbr3O88393 Atp5g1-202ENSMUST00000107684 596 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Tgfbr3O88393 Dpy30-201ENSMUST00000112571 790 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
Tgfbr3O88393 0610025J13Rik-203ENSMUST00000180374 713 ntTSL 5 BASIC16.47■□□□□ 0.23
Tgfbr3O88393 Gm37722-201ENSMUST00000193757 208 ntBASIC16.47■□□□□ 0.23
Tgfbr3O88393 Otx2os1-206ENSMUST00000228153 787 ntBASIC16.47■□□□□ 0.23
Tgfbr3O88393 Imp3-201ENSMUST00000034827 924 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
Tgfbr3O88393 Spem1-201ENSMUST00000045771 1041 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Tgfbr3O88393 Timm8a2-201ENSMUST00000045976 913 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Tgfbr3O88393 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Tgfbr3O88393 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Tgfbr3O88393 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC16.47■□□□□ 0.23
Tgfbr3O88393 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
Tgfbr3O88393 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Tgfbr3O88393 Tagln-201ENSMUST00000034590 1595 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Tgfbr3O88393 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC16.46■□□□□ 0.23
Tgfbr3O88393 Hmg20b-204ENSMUST00000122993 1502 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Tgfbr3O88393 Acot7-206ENSMUST00000167926 1505 ntAPPRIS P4 TSL 1 (best) BASIC16.46■□□□□ 0.23
Tgfbr3O88393 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Tgfbr3O88393 Mir770-201ENSMUST00000103252 94 ntBASIC16.46■□□□□ 0.23
Tgfbr3O88393 Fndc11-202ENSMUST00000108835 1154 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
Tgfbr3O88393 Mthfsl-204ENSMUST00000186863 725 ntTSL 2 BASIC16.46■□□□□ 0.23
Tgfbr3O88393 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Tgfbr3O88393 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Tgfbr3O88393 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Tgfbr3O88393 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
Tgfbr3O88393 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Tgfbr3O88393 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Tgfbr3O88393 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.22
Tgfbr3O88393 Fst-202ENSMUST00000223640 2612 ntBASIC16.46■□□□□ 0.22
Tgfbr3O88393 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.22
Tgfbr3O88393 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.22
Tgfbr3O88393 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC16.46■□□□□ 0.22
Tgfbr3O88393 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
Tgfbr3O88393 Trim54-202ENSMUST00000202769 1408 ntAPPRIS ALT1 TSL 5 BASIC16.45■□□□□ 0.22
Tgfbr3O88393 Il9r-204ENSMUST00000142396 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Tgfbr3O88393 Dhx36-201ENSMUST00000029336 5620 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Tgfbr3O88393 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Tgfbr3O88393 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Tgfbr3O88393 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Tgfbr3O88393 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
Tgfbr3O88393 Blcap-201ENSMUST00000088494 2108 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Tgfbr3O88393 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Tgfbr3O88393 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Tgfbr3O88393 Tpm2-203ENSMUST00000107914 1164 ntAPPRIS ALT1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Tgfbr3O88393 Hist1h2bc-201ENSMUST00000018246 1156 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Tgfbr3O88393 Gm27357-201ENSMUST00000183754 135 ntBASIC16.45■□□□□ 0.22
Tgfbr3O88393 Gm27742-201ENSMUST00000184667 60 ntBASIC16.45■□□□□ 0.22
Tgfbr3O88393 AC133598.3-202ENSMUST00000224219 531 ntBASIC16.45■□□□□ 0.22
Tgfbr3O88393 Tomm22-201ENSMUST00000023062 1031 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Tgfbr3O88393 Hist1h2ba-201ENSMUST00000052776 384 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
Tgfbr3O88393 Ahnak-201ENSMUST00000092955 1046 ntAPPRIS ALT2 TSL 2 BASIC16.45■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 32.9 ms