Protein–RNA interactions for Protein: O88196

Ttc3, E3 ubiquitin-protein ligase TTC3, mousemouse

Known RBP Predictions only

Length 1,979 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ttc3O88196 1700022H01Rik-201ENSMUST00000219142 387 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Ttc3O88196 Gm21559-201ENSMUST00000220638 855 ntBASIC18.23■□□□□ 0.51
Ttc3O88196 Gm8587-201ENSMUST00000076538 843 ntBASIC18.23■□□□□ 0.51
Ttc3O88196 Zdhhc16-201ENSMUST00000026154 1821 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Ttc3O88196 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Ttc3O88196 Tgfb1-201ENSMUST00000002678 2175 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Ttc3O88196 Dmap1-201ENSMUST00000102687 1566 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Ttc3O88196 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Ttc3O88196 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
Ttc3O88196 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Ttc3O88196 Smim12-201ENSMUST00000142029 1022 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Ttc3O88196 Cldn22-201ENSMUST00000038693 995 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
Ttc3O88196 Zdhhc6-201ENSMUST00000076891 2263 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Ttc3O88196 Hoxa10-201ENSMUST00000121043 1436 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
Ttc3O88196 Dtnbp1-203ENSMUST00000220555 1589 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
Ttc3O88196 Sfrp2-201ENSMUST00000029625 2003 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Ttc3O88196 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Ttc3O88196 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC18.22■□□□□ 0.51
Ttc3O88196 Dmtn-207ENSMUST00000228001 2437 ntBASIC18.22■□□□□ 0.51
Ttc3O88196 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Ttc3O88196 Nt5c1a-201ENSMUST00000068262 1220 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Ttc3O88196 Olfr315-201ENSMUST00000081533 998 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
Ttc3O88196 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Ttc3O88196 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Ttc3O88196 AC154855.1-201ENSMUST00000227353 1458 ntBASIC18.21■□□□□ 0.51
Ttc3O88196 Wbp2-202ENSMUST00000106444 1012 ntTSL 2 BASIC18.21■□□□□ 0.51
Ttc3O88196 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC18.21■□□□□ 0.51
Ttc3O88196 Gm27741-201ENSMUST00000185060 237 ntBASIC18.21■□□□□ 0.51
Ttc3O88196 Gm29518-201ENSMUST00000190858 372 ntBASIC18.21■□□□□ 0.51
Ttc3O88196 Slc35d2-204ENSMUST00000222168 472 ntTSL 3 BASIC18.21■□□□□ 0.51
Ttc3O88196 Ndufb8-201ENSMUST00000026222 680 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Ttc3O88196 Hist1h2af-201ENSMUST00000073261 399 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
Ttc3O88196 C530025M09Rik-201ENSMUST00000099264 690 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
Ttc3O88196 Gm10489-201ENSMUST00000180511 1466 ntTSL 2 BASIC18.21■□□□□ 0.51
Ttc3O88196 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC18.21■□□□□ 0.51
Ttc3O88196 Fam98a-201ENSMUST00000112507 2817 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Ttc3O88196 Amigo2-201ENSMUST00000053106 2871 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.5
Ttc3O88196 Sharpin-201ENSMUST00000023211 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Ttc3O88196 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Ttc3O88196 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Ttc3O88196 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Ttc3O88196 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Ttc3O88196 Sfrp4-201ENSMUST00000002883 1764 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Ttc3O88196 Gm15545-203ENSMUST00000150613 1059 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Ttc3O88196 Gm27389-201ENSMUST00000183622 195 ntBASIC18.2■□□□□ 0.5
Ttc3O88196 Gm37722-201ENSMUST00000193757 208 ntBASIC18.2■□□□□ 0.5
Ttc3O88196 Nudt1-201ENSMUST00000050205 954 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Ttc3O88196 Nudt1-202ENSMUST00000071881 952 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Ttc3O88196 Glmn-201ENSMUST00000078021 2015 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Ttc3O88196 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC18.2■□□□□ 0.5
Ttc3O88196 Skp1a-203ENSMUST00000109072 1754 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
Ttc3O88196 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Ttc3O88196 Ddhd2-206ENSMUST00000211688 2265 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Ttc3O88196 Gm11860-201ENSMUST00000122346 1010 ntBASIC18.19■□□□□ 0.5
Ttc3O88196 Gm27704-201ENSMUST00000185094 107 ntBASIC18.19■□□□□ 0.5
Ttc3O88196 Mrps6-201ENSMUST00000047429 846 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Ttc3O88196 Prss40-201ENSMUST00000047840 1275 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Ttc3O88196 6330411D24Rik-201ENSMUST00000211105 1568 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Ttc3O88196 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Ttc3O88196 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Ttc3O88196 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC18.19■□□□□ 0.5
Ttc3O88196 Fnbp1-205ENSMUST00000113552 1910 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Ttc3O88196 Gpd1l-201ENSMUST00000084853 1436 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Ttc3O88196 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Ttc3O88196 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Ttc3O88196 Fgf8-205ENSMUST00000111927 843 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Ttc3O88196 Cd70-201ENSMUST00000019633 842 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Ttc3O88196 Gm17949-201ENSMUST00000210548 1179 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
Ttc3O88196 AC156832.2-201ENSMUST00000216217 1295 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Ttc3O88196 Shc3-203ENSMUST00000223543 1241 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Ttc3O88196 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
Ttc3O88196 Isyna1-204ENSMUST00000210005 1914 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
Ttc3O88196 Gm26592-201ENSMUST00000180870 1730 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Ttc3O88196 4933427J07Rik-201ENSMUST00000156275 1533 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Ttc3O88196 Smim3-201ENSMUST00000042710 1984 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Ttc3O88196 Fam57b-201ENSMUST00000079423 2328 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Ttc3O88196 Adam15-203ENSMUST00000107446 1686 ntTSL 5 BASIC18.18■□□□□ 0.5
Ttc3O88196 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Ttc3O88196 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Ttc3O88196 Bcap29-201ENSMUST00000020979 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Ttc3O88196 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Ttc3O88196 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC18.18■□□□□ 0.5
Ttc3O88196 Gpha2-202ENSMUST00000113526 762 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
Ttc3O88196 Gm9103-201ENSMUST00000119371 405 ntBASIC18.18■□□□□ 0.5
Ttc3O88196 Acaa1a-203ENSMUST00000175743 1219 ntTSL 5 BASIC18.18■□□□□ 0.5
Ttc3O88196 Acaa1a-207ENSMUST00000176397 996 ntTSL 5 BASIC18.18■□□□□ 0.5
Ttc3O88196 Flg-207ENSMUST00000180293 768 ntAPPRIS ALT2 BASIC18.18■□□□□ 0.5
Ttc3O88196 Gpha2-201ENSMUST00000025698 609 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Ttc3O88196 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Ttc3O88196 Gm26627-201ENSMUST00000181540 1487 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Ttc3O88196 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
Ttc3O88196 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Ttc3O88196 Wnt10b-207ENSMUST00000228594 1510 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
Ttc3O88196 Urah-202ENSMUST00000106050 719 ntAPPRIS ALT2 TSL 2 BASIC18.17■□□□□ 0.5
Ttc3O88196 Sirt7-202ENSMUST00000106183 427 ntTSL 3 BASIC18.17■□□□□ 0.5
Ttc3O88196 Piga-208ENSMUST00000208697 947 ntTSL 5 BASIC18.17■□□□□ 0.5
Ttc3O88196 Alkbh2-201ENSMUST00000053657 1073 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Ttc3O88196 Htr5b-201ENSMUST00000055884 1935 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Ttc3O88196 Tnfrsf25-201ENSMUST00000025706 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Ttc3O88196 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC18.17■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 17.3 ms